Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0670
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54TC7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_Q8IHP1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q8ILK7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q54TC7 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1079

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = -3

Query: 597 MSYIVYF*INPLSTHNKYFNTHNENTSNRLHFYDTNKNK*FYMNMKTS-LKSYFLIIIIL 421
           +S  +Y   N  + +N   N +N N +N  +  + N N     N   S L  Y +I +I 
Sbjct: 407 ISIFIYSNTNNSNNNNSVSNNNNNNNNNNNNNNNNNNNNNNNNNNNNSQLIDYDIIKMIE 466

Query: 420 VFPKRMKEKHSLAFTKFF 367
            F K  KEKH +   ++F
Sbjct: 467 KFIKNDKEKHRIKMIEYF 484


>UniRef50_Q8IHP1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1429

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
 Frame = -3

Query: 594 SYIVYF*INPL---STHNKYFNTHNENTSNRLHFYDTNKNK*FYMNMKTSLKSYFLIIII 424
           +YI Y   NPL    T N        N   RLH +DT  +K F     T + S++    I
Sbjct: 110 NYIEYLRTNPLIFIDTLNNLLIIPGINFEYRLHNFDTKNSKYFLKKSDTKVNSFYNPFFI 169

Query: 423 LVFPKRMKEKHSL 385
            V    +K+ H +
Sbjct: 170 RVKNTNLKKTHKI 182


>UniRef50_Q8ILK7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1781

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 573 INPLSTHNKYFNTHNENTSNRLHFYDTNKNK*FYMNMK 460
           +NP++ +N   N +N++TSN + F +   N  FY + K
Sbjct: 772 MNPINNNNNNNNNNNDDTSNNVQFINNYTNDYFYYDEK 809


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,777,315
Number of Sequences: 1657284
Number of extensions: 8429829
Number of successful extensions: 24593
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24259
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)