Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0670
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    26   0.23 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   1.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.6  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    23   1.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.9  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    23   2.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   3.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   3.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   3.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.7  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 515 LDVFSLCVLKYLLCVDKGF 571
           L  FS+C+ ++  C D GF
Sbjct: 241 LSTFSICITQFYYCYDSGF 259


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 450 LKMFSYSYKIIYSYWCHKNV 509
           L +  Y Y   YSYW  KNV
Sbjct: 10  LLLLYYIYSKHYSYWQSKNV 29


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 229 RYQTLELEKEFHFNRYLT 246


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 229 RYQTLELEKEFHFNRYLT 246


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 251 RYQTLELEKEFHFNRYLT 268


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 229 RYQTLELEKEFHFNRYLT 246


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 229 RYQTLELEKEFHFNRYLT 246


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 185 RYQTLELEKEFHFNRYLT 202


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 229 RYQTLELEKEFHFNRYLT 246


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 17  RYQTLELEKEFHFNRYLT 34


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 253 RYQTLELEKEFHFNRYLT 270


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 229 RYQTLELEKEFHFNRYLT 246


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH++ Y T
Sbjct: 232 RYQTLELEKEFHTNHYLT 249


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH++ Y T
Sbjct: 14  RYQTLELEKEFHTNHYLT 31


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH ++Y T
Sbjct: 192 RYQTLELEKEFHFNKYLT 209


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH ++Y T
Sbjct: 192 RYQTLELEKEFHFNKYLT 209


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 221 LT*HNRSNLKFQRLRCQNKV 280
           LT H  SNL    LRC N +
Sbjct: 124 LTFHTSSNLTVSGLRCVNGI 143


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 221 LT*HNRSNLKFQRLRCQNKV 280
           LT H  SNL    LRC N +
Sbjct: 124 LTFHTSSNLTVSGLRCVNGI 143


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH ++Y T
Sbjct: 192 RYQTLELEKEFHFNKYLT 209


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 573 INPLSTHNKYFNTHNENT 520
           I+P  T   +FN HN  T
Sbjct: 157 IHPGMTFRYHFNVHNSGT 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,900
Number of Sequences: 336
Number of extensions: 2571
Number of successful extensions: 23
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)