Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0670
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   4.8  
AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    24   4.8  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   6.3  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   6.3  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 567 PLSTHNKYFNTHNENTSN 514
           PLS HN Y   +N N+S+
Sbjct: 538 PLSIHNSYAAPNNSNSSD 555


>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 169 LLYSQQSAHVTELKTNEVNM 228
           +LY + S H  E+ TN + M
Sbjct: 55  ILYDEHSVHKVEMVTNHIGM 74


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 253 RYQTLELEKEFHFNRYLT 270


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 337 RYASSFIEKNFHSSRYYT 284
           RY +  +EK FH +RY T
Sbjct: 289 RYQTLELEKEFHFNRYLT 306


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,123
Number of Sequences: 2352
Number of extensions: 9592
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)