BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0665 (662 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q8II39 Cluster: Putative uncharacterized protein; n=1; ... 37 0.38 UniRef50_Q6QXH8 Cluster: ORF118; n=23; Granulovirus|Rep: ORF118 ... 35 1.5 UniRef50_Q8IBB3 Cluster: Leucine-tRNA ligase; n=3; cellular orga... 35 1.5 UniRef50_Q3ZP67 Cluster: Lef-8; n=1; Hyphantria cunea granulovir... 33 4.6 UniRef50_Q8D296 Cluster: YjgP protein; n=1; Wigglesworthia gloss... 33 4.6 >UniRef50_Q8II39 Cluster: Putative uncharacterized protein; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein - Plasmodium falciparum (isolate 3D7) Length = 317 Score = 37.1 bits (82), Expect = 0.38 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = -2 Query: 655 FFFLLQ*IDYTFHMHRYITNRCSHDSKDNIYISQLKAIHSYRNIFKSYISYGNNDIF 485 F FLL I H H Y N+ H K N Y+ K+ + NI +SYI Y N++ + Sbjct: 60 FIFLL--ISNLLH-HVYENNKLYHKLKQNNYLLSYKSQYYLHNINQSYIKYNNDEFY 113 >UniRef50_Q6QXH8 Cluster: ORF118; n=23; Granulovirus|Rep: ORF118 - Agrotis segetum granulosis virus (AsGV) (Agrotis segetumgranulovirus) Length = 883 Score = 35.1 bits (77), Expect = 1.5 Identities = 12/34 (35%), Positives = 25/34 (73%) Frame = +2 Query: 416 CRINLQLLNYYKS*VHLYVSIKLEDVIISITNIR 517 C ++ +LNYYK +H++ +I + +I+S+TN++ Sbjct: 518 CLMSTMVLNYYKDYLHIFNTIPVAKLIVSLTNLK 551 >UniRef50_Q8IBB3 Cluster: Leucine-tRNA ligase; n=3; cellular organisms|Rep: Leucine-tRNA ligase - Plasmodium falciparum (isolate 3D7) Length = 1481 Score = 35.1 bits (77), Expect = 1.5 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = -2 Query: 658 FFFFLLQ*ID-YTFHMHRYITNRCSHDSKDNIYISQLK---AIHSYRNIFKSYISYGNND 491 FF F+ + +TFHM+ N K N +I +L ++Y N + + SY ND Sbjct: 375 FFIFINYILSIFTFHMYINNPNEQKQQQKKNTHIKELNNKIQKYNYINKYDFFFSYHQND 434 Query: 490 IFEFYT 473 +F F++ Sbjct: 435 LFLFFS 440 >UniRef50_Q3ZP67 Cluster: Lef-8; n=1; Hyphantria cunea granulovirus|Rep: Lef-8 - Hyphantria cunea granulovirus Length = 247 Score = 33.5 bits (73), Expect = 4.6 Identities = 12/26 (46%), Positives = 21/26 (80%) Frame = +2 Query: 440 NYYKS*VHLYVSIKLEDVIISITNIR 517 NYYK+ +H++ SI L +I+S+TN++ Sbjct: 178 NYYKNYLHIFYSIPLPKLIVSLTNLK 203 >UniRef50_Q8D296 Cluster: YjgP protein; n=1; Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis|Rep: YjgP protein - Wigglesworthia glossinidia brevipalpis Length = 357 Score = 33.5 bits (73), Expect = 4.6 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = -3 Query: 657 FFFFCCNEL--ITRSTCIDILPIDVHMIQKIIYILAS*KLYTPIVTFLNLILVMEIMTSS 484 F F C +L I S +++P + I+YI KL P+ F+++ LVM+ + +S Sbjct: 23 FLIFFCQKLVRILSSMSEELIPKKIIFFLLILYIPEIIKLILPLSLFISIALVMQKLHNS 82 Query: 483 SFILTYK 463 + I++ K Sbjct: 83 NEIISIK 89 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 540,165,105 Number of Sequences: 1657284 Number of extensions: 9691833 Number of successful extensions: 16631 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 16004 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16625 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 50413227838 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -