Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0665
         (662 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8II39 Cluster: Putative uncharacterized protein; n=1; ...    37   0.38 
UniRef50_Q6QXH8 Cluster: ORF118; n=23; Granulovirus|Rep: ORF118 ...    35   1.5  
UniRef50_Q8IBB3 Cluster: Leucine-tRNA ligase; n=3; cellular orga...    35   1.5  
UniRef50_Q3ZP67 Cluster: Lef-8; n=1; Hyphantria cunea granulovir...    33   4.6  
UniRef50_Q8D296 Cluster: YjgP protein; n=1; Wigglesworthia gloss...    33   4.6  

>UniRef50_Q8II39 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 317

 Score = 37.1 bits (82), Expect = 0.38
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = -2

Query: 655 FFFLLQ*IDYTFHMHRYITNRCSHDSKDNIYISQLKAIHSYRNIFKSYISYGNNDIF 485
           F FLL  I    H H Y  N+  H  K N Y+   K+ +   NI +SYI Y N++ +
Sbjct: 60  FIFLL--ISNLLH-HVYENNKLYHKLKQNNYLLSYKSQYYLHNINQSYIKYNNDEFY 113


>UniRef50_Q6QXH8 Cluster: ORF118; n=23; Granulovirus|Rep: ORF118 -
           Agrotis segetum granulosis virus (AsGV) (Agrotis
           segetumgranulovirus)
          Length = 883

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 12/34 (35%), Positives = 25/34 (73%)
 Frame = +2

Query: 416 CRINLQLLNYYKS*VHLYVSIKLEDVIISITNIR 517
           C ++  +LNYYK  +H++ +I +  +I+S+TN++
Sbjct: 518 CLMSTMVLNYYKDYLHIFNTIPVAKLIVSLTNLK 551


>UniRef50_Q8IBB3 Cluster: Leucine-tRNA ligase; n=3; cellular
           organisms|Rep: Leucine-tRNA ligase - Plasmodium
           falciparum (isolate 3D7)
          Length = 1481

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = -2

Query: 658 FFFFLLQ*ID-YTFHMHRYITNRCSHDSKDNIYISQLK---AIHSYRNIFKSYISYGNND 491
           FF F+   +  +TFHM+    N      K N +I +L      ++Y N +  + SY  ND
Sbjct: 375 FFIFINYILSIFTFHMYINNPNEQKQQQKKNTHIKELNNKIQKYNYINKYDFFFSYHQND 434

Query: 490 IFEFYT 473
           +F F++
Sbjct: 435 LFLFFS 440


>UniRef50_Q3ZP67 Cluster: Lef-8; n=1; Hyphantria cunea
           granulovirus|Rep: Lef-8 - Hyphantria cunea granulovirus
          Length = 247

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 12/26 (46%), Positives = 21/26 (80%)
 Frame = +2

Query: 440 NYYKS*VHLYVSIKLEDVIISITNIR 517
           NYYK+ +H++ SI L  +I+S+TN++
Sbjct: 178 NYYKNYLHIFYSIPLPKLIVSLTNLK 203


>UniRef50_Q8D296 Cluster: YjgP protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           YjgP protein - Wigglesworthia glossinidia brevipalpis
          Length = 357

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = -3

Query: 657 FFFFCCNEL--ITRSTCIDILPIDVHMIQKIIYILAS*KLYTPIVTFLNLILVMEIMTSS 484
           F  F C +L  I  S   +++P  +     I+YI    KL  P+  F+++ LVM+ + +S
Sbjct: 23  FLIFFCQKLVRILSSMSEELIPKKIIFFLLILYIPEIIKLILPLSLFISIALVMQKLHNS 82

Query: 483 SFILTYK 463
           + I++ K
Sbjct: 83  NEIISIK 89


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,165,105
Number of Sequences: 1657284
Number of extensions: 9691833
Number of successful extensions: 16631
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16625
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)