Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0664
         (300 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   1.9  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   2.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   2.5  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    23   2.5  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   2.5  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   3.3  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    22   4.3  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   4.3  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    22   4.3  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    22   4.3  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    22   5.7  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    22   5.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   5.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   5.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    22   5.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    21   7.6  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    21   7.6  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    21   7.6  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 288 QSREQGHQDHHRGPAPRHSEKHSASEADRAERLLP 184
           Q ++Q H  HH     +   K++    + +ER+LP
Sbjct: 779 QQQQQQHHHHHLQQQQQIVGKNTLYSRNSSERMLP 813


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -1

Query: 237 HSEKHSASEADRAERLLPGALRDAPSPE*TFSTCLVSTE 121
           HSE    S +  A+  +P  ++     +  FS  + STE
Sbjct: 431 HSESEELSMSTAADTAVPSGIKSPAFKQPAFSHSVCSTE 469


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -1

Query: 237 HSEKHSASEADRAERLLPGALRDAPSPE*TFSTCLVSTE 121
           HSE    S +  A+  +P  ++     +  FS  + STE
Sbjct: 431 HSESEELSMSTAADTAVPSGIKSPAFKQPAFSHSVCSTE 469


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 249 GLCGGPDVPAHGSAPPG 299
           G+ G P +PA G +P G
Sbjct: 318 GITGVPPIPADGPSPAG 334


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -1

Query: 279 EQGH-QDHHRGPAPRHSEKHSASEA 208
           + GH + HH+     H   HSA EA
Sbjct: 223 DSGHMRSHHQHYTANHQNGHSAPEA 247


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 270 HQDHHRGPAPRHSEKHSAS 214
           HQ HH+ P   H ++H  S
Sbjct: 119 HQHHHQHPHLPHVQQHHPS 137


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 270 HQDHHRGPAPRHSEKHSASEA-DRAER 193
           H D + G A   ++K S SEA ++ ER
Sbjct: 75  HSDRYNGEAGGRAKKQSFSEALEKIER 101


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 107 GNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSAS 214
           G G D  + ++ EK Y G+G      GS R + S+S
Sbjct: 604 GGGYDRDDYRRTEKDYRGNGKH-DKYGSSRHSDSSS 638


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 175 QRRPVTGINLLDLFGLDGVH 116
           QR  +TG N  DLF LD  H
Sbjct: 245 QRALLTGANRYDLFLLDEHH 264


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 191 CCRERSETPRHRNKP 147
           CC +RSE    RN+P
Sbjct: 66  CCPDRSEQLPSRNRP 80


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 269 IRTTTEARRPGTARNTRRPKPTE 201
           +RT+T  +R GT +   +P P +
Sbjct: 233 LRTSTLMQRDGTLQRRTQPSPRQ 255


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/45 (26%), Positives = 16/45 (35%)
 Frame = -2

Query: 191 CCRERSETPRHRNKPSRPVWSRRSPHHFHCSIXXXXXYNLIVVLT 57
           CCR    T +H   P R V +       HC         + V+ T
Sbjct: 26  CCRSLISTRQHGFFPRRSVTTNLVEFVSHCHAAFASGAQMDVIYT 70


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -2

Query: 275  RDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPS 144
            R++R   EARR     +T   K    ++      +  RH+ +PS
Sbjct: 2953 RELREELEARRYDRDMSTETSKRDIPNIPPAPEQQPVRHQQRPS 2996


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -1

Query: 288  QSREQGHQDHHRGPAPRHSEKHSAS 214
            Q  +Q    HH  P    S  HS+S
Sbjct: 1323 QQHQQHQLQHHHQPQLSQSSHHSSS 1347


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 274 GTSGPPQRPGAQAQR 230
           G  GPP  PGA +++
Sbjct: 299 GPEGPPGEPGAASEK 313



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 274 GTSGPPQRPGAQAQRETLGVRSRQ 203
           G +GPP  PG    R   G R  +
Sbjct: 42  GNAGPPGAPGPVGPRGLTGHRGEK 65


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 240 RHSEKHSASEADRAERLLPG 181
           RH    SA E D  +R  PG
Sbjct: 283 RHLSTSSADEPDACDRKAPG 302


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/17 (29%), Positives = 9/17 (52%)
 Frame = +2

Query: 215 DAECFSLCLGAGPLWWS 265
           + +C   C+G    WW+
Sbjct: 64  ETKCLIFCVGTDLRWWN 80


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/17 (29%), Positives = 9/17 (52%)
 Frame = +2

Query: 215 DAECFSLCLGAGPLWWS 265
           + +C   C+G    WW+
Sbjct: 64  ETKCLIFCVGTDLRWWN 80


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,474
Number of Sequences: 2352
Number of extensions: 6215
Number of successful extensions: 34
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)