Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0663
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 8e-29
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 89 4e-18
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 68 6e-12
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 61 7e-10
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 61 9e-10
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 54 1e-07
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 54 1e-07
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 54 1e-07
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 52 5e-07
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 50 1e-06
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 50 2e-06
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 50 2e-06
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 50 2e-06
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 47 1e-05
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 46 2e-05
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 46 3e-05
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 44 8e-05
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 43 2e-04
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 42 4e-04
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 42 6e-04
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 42 6e-04
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 42 6e-04
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 36 0.022
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.022
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.029
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 35 0.050
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 35 0.050
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 35 0.050
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 35 0.066
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 34 0.087
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 34 0.12
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 32 0.35
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_9041| Best HMM Match : RRM_1 (HMM E-Value=1.4e-10) 31 0.81
SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085) 31 1.1
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095) 31 1.1
SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 3.3
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.3
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 28 7.6
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 124 bits (298), Expect = 8e-29
Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +1
Query: 124 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHXXXXXX 300
E ++LYVGNLDP T+ +C++F +I V CK+I P + PY F+EF H
Sbjct: 365 EEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQEA 424
Query: 301 XXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 480
M++R V+DK++KVNWAT+ + DT+NH HIFVGDL+ ++ +LR+ F PFGEI
Sbjct: 425 KFRMDQRTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEI 484
Query: 481 S 483
S
Sbjct: 485 S 485
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +1
Query: 490 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 639
R+V+DP KSKG+ FVSFV++ DA AI M+ +G + ++TNW+ RK
Sbjct: 543 RVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK 592
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG-YAFVSFVKKADAEAAIQA 582
++VG+L P+ ++ F ++ C+++ P KG Y FV F ADA+ A
Sbjct: 371 LYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPT---DKGPYCFVEFETHADAQEAKFR 427
Query: 583 MNGQWLGSRSIRTNWSTRKP 642
M+ + + + ++ NW+T P
Sbjct: 428 MDQRTVMDKKLKVNWATNHP 447
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Frame = +1
Query: 226 KIIREPGNDP---YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKT---- 384
+++++P + + F+ F M+ + K++K NWA N +T
Sbjct: 543 RVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPLV 602
Query: 385 -DTSNHHH------IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 543
D H ++VG+L P+++ L++ F+ +G I ++ D KGYAF++
Sbjct: 603 WDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFIN 656
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 139 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFL 267
T+YVGNL P V + L +F Q G + K+ + G YAF+
Sbjct: 616 TVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKG---YAFI 655
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 88.6 bits (210), Expect = 4e-18
Identities = 56/179 (31%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Frame = +1
Query: 115 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTCHX 285
+ + + T+YVG LD V+E + LF Q G V + ++ + Y F+EF
Sbjct: 6 IAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEE 65
Query: 286 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 465
MN V K ++VN A++ + D + +F+G+L E++ +L + F+
Sbjct: 66 DADYAIKVMNMIKVYGKPIRVNKASA--HNKNLDVGAN--LFIGNLDTEVDEKLLYDTFS 121
Query: 466 PFGEISNC-RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 639
FG I +I+RD T SKG+AF++F ++AAI+AMNGQ+L +R I +++ +K
Sbjct: 122 AFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 180
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +1
Query: 376 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 555
P + + I+VG L ++ ++ E F G + N + +D T +GY FV F+ +
Sbjct: 5 PIAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGE 64
Query: 556 ADAEAAIQAMNGQWLGSRSIRTN 624
DA+ AI+ MN + + IR N
Sbjct: 65 EDADYAIKVMNMIKVYGKPIRVN 87
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 68.5 bits (160), Expect = 4e-12
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Frame = +1
Query: 118 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXX 288
G L + + PS+++ + +FG +G+V CK+IR+ YAF+ +
Sbjct: 21 GTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDD 80
Query: 289 XXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAP 468
MN + +K +KV++A +P + + ++++ L +++ + F P
Sbjct: 81 ANKAVREMNGARLQNKTLKVSFA-----RPSSTEIKNANLYISGLPKDMKEEEVEALFKP 135
Query: 469 FGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPP 645
FG+I ++++D + +G FV F K+ +A+ AI +N + L +++ PP
Sbjct: 136 FGKIITSKVLKDVSG-EGRGTGFVRFDKRCEAQTAIDDLNNKTLPGTNVKLTVKFANPP 193
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
IFV L E L + F+P+G I+N + D KGY FV+ +A AI +
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLD------KGYGFVNMSNYEEACHAICCL 327
Query: 586 NG 591
NG
Sbjct: 328 NG 329
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 68.1 bits (159), Expect = 6e-12
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Frame = +1
Query: 118 GDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTC-- 279
G ++P +LYVG+L P VTE L F G V ++ R+ + YA++ F
Sbjct: 6 GAANYPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPG 65
Query: 280 HXXXXXXXXXMNKRVVLDKEMKVN-WATSPGNQPK--TDTSNHHHIFVGDLSPEIETNIL 450
H ++ ++ DK++ V W + K T +++V + +++ +
Sbjct: 66 HDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQM 125
Query: 451 REAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSI 615
+E A G+I + +++ DP+ KSKG+ FVSF +AE A+ +NG+ +G R +
Sbjct: 126 KEICAEAGKIVSLKVMTDPEG-KSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRL 179
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +1
Query: 403 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 582
++++ +L I+ LRE F+P+G IS+ ++++D + SKG+ FV F +A A+
Sbjct: 213 NLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKG-NSKGFGFVCFSSPEEATKAVTE 271
Query: 583 MNGQWLGSRSIRTNWSTRK 639
MNG+ L S+ + + R+
Sbjct: 272 MNGRILISKPLYVALAQRR 290
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Frame = +1
Query: 376 PKTDTSNHH--HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 549
P T +N+ ++VGDL+P++ +L E F+ G + + R+ RD T +S GYA+V+F
Sbjct: 3 PSTGAANYPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQ 62
Query: 550 KKADAEA--AIQAMNGQWLGSRSIRT-NWSTRK 639
+ A AI ++G L + + W ++K
Sbjct: 63 QPGHDAALEAIARVDGMLLNDKKVFVGRWMSKK 95
Score = 31.5 bits (68), Expect = 0.62
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +1
Query: 142 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR-EPGNDP-YAFLEFTCHXXXXXXXXXMN 315
LY+ NLD + + L F G + K+++ + GN + F+ F+ MN
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMN 273
Query: 316 KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVG 417
R+++ K + V A + + H H G
Sbjct: 274 GRILISKPLYVALAQRREERKAQLAAQHMHRISG 307
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 67.7 bits (158), Expect = 8e-12
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Frame = +1
Query: 139 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR-EPGNDPYAF--LEFTCHXXXXXXXXX 309
TL V + +T+ +F + + CKI+R +P Y F +++
Sbjct: 48 TLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDK 107
Query: 310 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 489
+N + +K +KV ++ +P D + +++V ++ ++ R+AF +G I NC
Sbjct: 108 LNGFTIGNKVLKVAFS-----RPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNC 162
Query: 490 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 591
R++RD T KG FV + KKA+A+AAI +++G
Sbjct: 163 RLLRDKSTGLPKGCGFVLYDKKAEAQAAISSLSG 196
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/86 (24%), Positives = 42/86 (48%)
Frame = +1
Query: 373 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 552
+P+ + + V + ++ R F ++NC+IVR + S G+ FV +
Sbjct: 38 EPQEAQESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNT 97
Query: 553 KADAEAAIQAMNGQWLGSRSIRTNWS 630
DA+ AI +NG +G++ ++ +S
Sbjct: 98 TEDAQKAIDKLNGFTIGNKVLKVAFS 123
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
++V ++ + + F G ++ I+ D Q + KG+ FV+ + +A+ AIQ +
Sbjct: 277 LYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQTL 336
Query: 586 NG 591
NG
Sbjct: 337 NG 338
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +1
Query: 391 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 570
+N +VG L+ E++ +L AF PFG+I++ +I D T K +G+ FV F D A
Sbjct: 2 ANKRVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAA 61
Query: 571 AIQAMNGQWLGSRSIRTN 624
AI MN L R+IR N
Sbjct: 62 AIDNMNESELFGRTIRVN 79
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 60.9 bits (141), Expect = 9e-10
Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 9/176 (5%)
Frame = +1
Query: 142 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHXXXXXXXXXM 312
+YVG+++ + E + T F G + + +P N +AF+E+ M
Sbjct: 104 VYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQM 163
Query: 313 NKRVVLDKEMKVNWATS-PGNQP-----KTDTSNHHHIFVGDLSPEIETNILREAFAPFG 474
N ++ + +KV ++ P P + + + I++ + P++ + ++ F FG
Sbjct: 164 NGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAFG 223
Query: 475 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKP 642
++ +C + ++P T K KGY F+ + + A AI +MN LG + +R + P
Sbjct: 224 KVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRVGRAITPP 279
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
++VG ++ E+ +R AF PFG I+ + DP +K KG+AFV + A+ A++ M
Sbjct: 104 VYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQM 163
Query: 586 NGQWLGSRSIRTNWSTRKPPA 648
NG LG R+I+ + P A
Sbjct: 164 NGVLLGGRNIKVGRPSNVPQA 184
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +1
Query: 364 PGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 543
PG + H IF+G L + + ++E + FGE+ +V+D T SKGYAF
Sbjct: 661 PGVVSTVVPDSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCE 720
Query: 544 FVKKADAEAAIQAMNGQWLGSRSI 615
+V + AIQ +NG LG + +
Sbjct: 721 YVDLGITDVAIQGLNGMQLGDKKL 744
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 385 DTSNHHH---IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 555
D S H I V +LS E + L+E F P G IS + +D T +SKG+AF++FV +
Sbjct: 173 DGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHR 232
Query: 556 ADAEAAIQAMNGQWLGSRSIRTNWS 630
DA AI+ ++G + W+
Sbjct: 233 EDAARAIEVLSGFGYDHLILNVEWA 257
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
++VG L I +++ F PFG + + +++ D +T +SKGY FV F + A+ A++ M
Sbjct: 244 LYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQM 303
Query: 586 NGQWLGSRSIR 618
NG L R ++
Sbjct: 304 NGFELAGRPLK 314
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 364 PGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 543
P + + + +F L+ I L E F+ G++S+ RI+ D + +SKG A++
Sbjct: 134 PMTEESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIE 193
Query: 544 FVKKADAEAAIQAMNGQWL 600
F K+ AI ++GQ L
Sbjct: 194 FTDKSAVPLAI-GLSGQKL 211
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 133 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXX 303
P LYVG+L ++TE + +F G V ++I + + Y F++F
Sbjct: 241 PTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
Query: 304 XXMNKRVVLDKEMKVNWATSPGN 372
MN + + +K+ T G+
Sbjct: 301 EQMNGFELAGRPLKIGPVTERGD 323
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/65 (43%), Positives = 35/65 (53%)
Frame = +1
Query: 394 NHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAA 573
N IF GDL E+ L AFA + +IVRD ++ KSKGY FVSF D A
Sbjct: 215 NDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKA 274
Query: 574 IQAMN 588
++ MN
Sbjct: 275 MREMN 279
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/81 (29%), Positives = 48/81 (59%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+FV ++ E + + + E F+ +GEI N + D +T KGYA V + +A++A++A+
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 586 NGQWLGSRSIRTNWSTRKPPA 648
NG + ++I +W+ + P+
Sbjct: 355 NGAEMLGQNISVDWAFIRGPS 375
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 51.6 bits (118), Expect = 5e-07
Identities = 45/173 (26%), Positives = 76/173 (43%)
Frame = +1
Query: 121 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXX 300
D +TL+VGN++ + T L F + G+V I ++PGN+PYAF++F
Sbjct: 244 DPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELSSAIQA 303
Query: 301 XXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 480
M++ V +KV + K + N I+VG ++ + + F +G +
Sbjct: 304 RRKMDREYVGRNRVKVGFG-------KVNPIN--TIWVGGVTNSLSEQQVERHFGRYGRV 354
Query: 481 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 639
+ I R A VSF A A M G+ + SR +R + +R+
Sbjct: 355 TKVVINR------VTNQALVSFDSVDSATIAHAQMKGRTMFSRRVRVEFVSRE 401
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +1
Query: 385 DTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKA 558
D ++ H +F+G+L +IE LRE F G + + R++RD +T KG+ +V F K
Sbjct: 49 DKAHDHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKD 108
Query: 559 DAEAAIQAMNGQWLGSRSIRTNWSTRKP 642
A++ N ++ G R IR S KP
Sbjct: 109 AVVFALKMNNAEFKG-RKIRVFPSKDKP 135
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/71 (29%), Positives = 44/71 (61%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
++VG+L + + L + F +G++ I+RD +T +S+G AF+ F+ + A+ A+ A+
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 586 NGQWLGSRSIR 618
N + + R+I+
Sbjct: 72 NKKQMFGRTIK 82
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 139 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHXXXXXXXXX 309
T+YVGNL S+T L +F + G V I+R+ + AF+ F
Sbjct: 11 TVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
Query: 310 MNKRVVLDKEMKVNWATSPGNQPK 381
+NK+ + + +K A G P+
Sbjct: 71 VNKKQMFGRTIKCTIAKDNGRAPE 94
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+FVG++ E L+E F+ G + + R+V D +T K KGY F + + A +A++ +
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 586 NGQWLGSRSIRTN 624
NG L R++R +
Sbjct: 87 NGYELNGRALRVD 99
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +1
Query: 376 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 555
P D SN +F+ L E L + F PFG + + ++ D QT SK + FVS+
Sbjct: 272 PGPDGSN---LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNV 328
Query: 556 ADAEAAIQAMNGQWLGSRSIR 618
A+ AIQ MNG +G++ ++
Sbjct: 329 MSAQNAIQHMNGFQIGAKRLK 349
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 367 GNQPKTDTSNHHHI-FVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 543
G+ P D ++ FV L+P L F+ FG I +C ++RD +T +S YAF+
Sbjct: 108 GDIPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIE 167
Query: 544 FVKKADAEAAIQAMNGQWLGSRSIRTNWS 630
F K D E A M+ + R I ++S
Sbjct: 168 FEKDEDCERAYFKMDNVLIDDRRIHVDFS 196
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 142 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXXXXM 312
L+V L+P T+ L +F + G + C++IR+ YAF+EF M
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 313 NKRVVLDKEMKVNWATS 363
+ ++ D+ + V+++ S
Sbjct: 182 DNVLIDDRRIHVDFSQS 198
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 48.0 bits (109), Expect = 7e-06
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +1
Query: 331 DKEMKVNWATSP-GNQPKTDTSNHHHIFVGDLS----PEIETNI-LREAFAPFGEISNCR 492
D K SP G +P+T + + VGDL P T ++E F FGEI C
Sbjct: 86 DSASKRKIEESPIGKEPETKITKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCE 145
Query: 493 IVRDPQTLKSKGYAFVSFVKKADAE 567
+ DP T +S+G+ FV F K DA+
Sbjct: 146 VKLDPNTRRSRGFGFVRFKKDEDAK 170
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 373 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 552
+PK + + +FVG L L E FA FGE+++ I P+ + + FV+F
Sbjct: 190 RPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRH--FGFVTFAS 244
Query: 553 KAD-AEAAIQAMN 588
A+ A + MN
Sbjct: 245 VANCVSIAFENMN 257
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 133 PKTLYVGNLDPSVTEVFLCTLFGQIGDV 216
PK L+VG L S TE L F Q G+V
Sbjct: 198 PKKLFVGRLPESTTEKTLMEYFAQFGEV 225
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAA 573
+FVG + E + LR+ FA FGEI +++D T KSKGY FV+ AE A
Sbjct: 12 LFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELA 67
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/78 (30%), Positives = 43/78 (55%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
++VG+L +++ L AF FG +S + R+P G+AFV + DAE A++ +
Sbjct: 6 LYVGNLGRNADSSELERAFEKFGRLSKVWVARNPP-----GFAFVEYEDYRDAEEAVREL 60
Query: 586 NGQWLGSRSIRTNWSTRK 639
+G + R+IR +S +
Sbjct: 61 DGANVCDRTIRVEFSNNR 78
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +1
Query: 412 VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 591
V +L+ L++ F +G++ + I RD T +S+G+AFV F +K DAE A+ M+
Sbjct: 20 VDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMDCMDA 79
Query: 592 QWLGSRSIRTNW 627
L + W
Sbjct: 80 TCLMAEKFVFRW 91
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI--- 576
I++ D P+I + L F P+G I + I+R QT KSKG+ +V++ A+ A+
Sbjct: 65 IYIRDFRPDIRKSSLESVFGPYGAIEDLSIIR-TQTGKSKGFGYVTYENAESAQRALAGT 123
Query: 577 QAMNGQWL 600
++G+W+
Sbjct: 124 HIIDGKWV 131
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/72 (27%), Positives = 45/72 (62%)
Frame = +1
Query: 409 FVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 588
++G+L ++ L++ F+ + ++ + +++ D +T + +G+AFV+F K + E AI ++
Sbjct: 233 YIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELD 291
Query: 589 GQWLGSRSIRTN 624
GQ RS++ N
Sbjct: 292 GQEFDGRSMKVN 303
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +1
Query: 448 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIR 618
L + F PFG + + ++ D QT SK + FVS+ A+ AIQ MNG +G++ ++
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLK 334
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 10/154 (6%)
Frame = +1
Query: 115 MGDESHPKTLYVGNLDPSVTEVFLCTLF-----GQIGDVKGCKIIREPGNDP--YAFLEF 273
MGD+S L+VG L+ TE + F G DV + + P + F+EF
Sbjct: 1 MGDDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEF 60
Query: 274 TC-HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 450
+ + +K+++V A + + +F+G L E +
Sbjct: 61 SNGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDV 120
Query: 451 REAFAPFGEIS--NCRIVRDPQTLKSKGYAFVSF 546
+ A AP + ++VRD +T K KGY FV+F
Sbjct: 121 KTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNF 154
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 373 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 546
Q T+ +FVG L+ E LRE F +GE+++ ++ D T KS+G+ +V+F
Sbjct: 5 QENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 385 DTSNHHHIFVGDLSPEI-ETNILREAFAPFGEISNCRIV---RDPQTLKSKGYAFVSFVK 552
D + +++G+L + E NIL+ FGEI + + + P + +GY FV F K
Sbjct: 382 DAVSERKLWIGNLDKRLSEFNILK-ILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKK 440
Query: 553 KADAEAAIQAMNGQWLGSRSIRTNWS 630
K DA A++ +N + + SR++ +W+
Sbjct: 441 KEDARKALRGLNKKIVLSRALVVDWA 466
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = +1
Query: 121 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-------YAFLEFTC 279
D + L++GNLD ++E + + Q G+++ + + GN P Y F+EF
Sbjct: 382 DAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFH-GNGPNRGEPRGYCFVEFKK 440
Query: 280 HXXXXXXXXXMNKRVVLDKEMKVNWA 357
+NK++VL + + V+WA
Sbjct: 441 KEDARKALRGLNKKIVLSRALVVDWA 466
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/75 (33%), Positives = 42/75 (56%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+++G LS ++ N+L E F FG + + I+RD ++ KS+ FV F AEAA M
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVHFWSSDVAEAANVGM 584
Query: 586 NGQWLGSRSIRTNWS 630
NG + + + T ++
Sbjct: 585 NGCDILGKIVETKYA 599
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 44.0 bits (99), Expect = 1e-04
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Frame = +1
Query: 61 ILVFIDVKKVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR- 237
++ F++ K D+ N+ L+VGNL TE L G+++ ++R
Sbjct: 90 VISFLNTCKYHDKT--LNVSPAPPESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRS 147
Query: 238 EPGNDP--YAFLEF-TCHXXXXXXXXXMN--KRVVLDKEMKVNWATSPGNQPKTDTSNHH 402
E D Y F+E+ T +N + + + ++V +A S N +
Sbjct: 148 EVTGDSKGYGFVEYATRENAMQAKQQLLNTASKYIGGRILRVAFAES--NLLTYADVHSR 205
Query: 403 HIFVGDLSPEIETN-ILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 579
+FV L + + +++E F+ G ++ ++ +P S+G+AFV + +AE +
Sbjct: 206 TLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQR 265
Query: 580 AMNGQWLGSRSIRTNWST 633
A NG+ + +IR + +
Sbjct: 266 AHNGRQVEGSNIRVAYGS 283
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 469 FGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTN 624
+GEI N +VRD +T K KG+ F+ + + A+ NG LG R+IR +
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVD 53
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+F+G+LS + + L F G + CR++ Q +S+G+ + F K D A++ +
Sbjct: 182 VFLGNLSFDADEETLAAFFEEKGLSATCRVI--TQEGRSRGFGYADFTSKEDYNKALE-L 238
Query: 586 NGQWLGSRSIRTNWSTRKP 642
NG+ R IR N + KP
Sbjct: 239 NGEDCCGREIRINPANSKP 257
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 570
+FVG LS E L+E F+ +GE+ I D T + +G+AFV F +++A+A
Sbjct: 31 LFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADA 85
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFA-PFGEISNCRIVRDPQTLKSKGYAFVSF 546
IFVG L PE +RE F + + + + + + +G+ FVSF
Sbjct: 105 IFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSF 152
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 448 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 579
LR F FG+I +IVRD +T ++KGY +V F K + A A++
Sbjct: 69 LRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALE 112
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +1
Query: 448 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLG 603
+R AF +G I + +V+D T +++G +V FVK + A A + M+G+ +G
Sbjct: 39 IRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASSAALACEEMDGRNIG 90
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/85 (22%), Positives = 43/85 (50%)
Frame = +1
Query: 361 SPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFV 540
SP + ++ T ++V L+ + + ++E F+ +G + + D S+G+A+V
Sbjct: 1144 SPRRRKRSPTPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYV 1203
Query: 541 SFVKKADAEAAIQAMNGQWLGSRSI 615
+V + E A++ M+G + + I
Sbjct: 1204 EYVDPEECEKALKHMDGGQIDGQEI 1228
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
I++G + N +++ F FG ++ R+ R ++ +SKGYAFV F A+ A M
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTM 159
Query: 586 NGQWLGSRSIR 618
+ + R ++
Sbjct: 160 HNYMMFGRLLK 170
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +1
Query: 121 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHXXX 291
DE P +Y+G++ E + F Q G V ++ R + YAF+EF C
Sbjct: 93 DELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVA 152
Query: 292 XXXXXXMNKRVVLDKEMK 345
M+ ++ + +K
Sbjct: 153 KIAADTMHNYMMFGRLLK 170
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 448 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRT 621
LR+ F FGE+ C ++RDP T +S+G+ F++F + + + + G + + T
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKMVTT 181
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+++G+L+ + + +AF FG + I+RD ++ +S+G+ FV AI+ M
Sbjct: 11 LYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKM 69
Query: 586 NGQWLGSRSI 615
N +G R+I
Sbjct: 70 NQSSVGGRNI 79
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +1
Query: 139 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCH-XXXXXXXXXMN 315
TLYVG L+ VTE L F Q G+++ ++ AF+ FT N
Sbjct: 305 TLYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQN---CAFVCFTSRAAAEAAADRSFN 361
Query: 316 KRVVLDKEMKVNWATSPGNQPKTDTSNHH 402
K ++ + +K+ W S G QP H
Sbjct: 362 KLILKGRRLKIMWGKSQGQQPAPGRQGGH 390
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 370 NQPKTDTSNHHHI---FVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFV 540
+ P DT I +VG L ++ LR+ F FGE+ + +V P+ + AFV
Sbjct: 291 SMPMLDTPTDRSITTLYVGGLEGKVTEQDLRDHFYQFGELRSISMV--PR----QNCAFV 344
Query: 541 SFVKKADAEAAI-QAMNGQWLGSRSIRTNW 627
F +A AEAA ++ N L R ++ W
Sbjct: 345 CFTSRAAAEAAADRSFNKLILKGRRLKIMW 374
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 136 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEF 273
+T++V NLDP +T L + F GD+K ++ + G YA++EF
Sbjct: 72 RTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTRYAYIEF 118
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+FV +L PEI +L F+ G+I R+ D K YA++ F + +A+Q
Sbjct: 74 VFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDG--KPTRYAYIEFAETQAIVSALQ-Y 130
Query: 586 NGQWLGSRSIRTNWSTRK 639
+G G + I++ S R+
Sbjct: 131 SGAIFGGKPIKSRSSRRR 148
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+F+G + + + L GEI R+ DP T +KG+AF +F ++ A AI +
Sbjct: 155 VFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAITTL 214
Query: 586 N 588
N
Sbjct: 215 N 215
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAE 567
IFV + E + LR F +G + +IVRD + SKGYAF++F + A+
Sbjct: 10 IFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGV-SKGYAFITFESQEVAD 62
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 115 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEF 273
MGD+ K ++V + TE L F + G VK KI+R+ + YAF+ F
Sbjct: 1 MGDQDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITF 55
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAF-APFGEISNCRIVRDP-------QTLKSKGYAFVSFVKKAD 561
++ G+L ++ + L+ F A +++ IV++P Q +S+G+ FV+F D
Sbjct: 52 VYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPED 111
Query: 562 AEAAIQAMNGQWLGSRSIR 618
A+ A++++NG+ + R+++
Sbjct: 112 AQTAVKSLNGKEVQGRTLK 130
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 546
+F+ +LS + + F FG+I+ C++V D T SKG AFV +
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKY 464
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Frame = +1
Query: 73 IDVKKVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGC-----KIIR 237
+ VK VI+ ++ S L + NL + TE L F G+V K+ R
Sbjct: 226 VKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGR 285
Query: 238 EPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWA 357
+ F++FT MN + +L + + V+WA
Sbjct: 286 RNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAVDWA 325
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 139 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 234
T+++ NL T+ + LF Q GD+ CK++
Sbjct: 417 TVFIRNLSFDSTQKNITNLFKQFGDIAYCKVV 448
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 35.9 bits (79), Expect = 0.029
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 3/176 (1%)
Frame = +1
Query: 121 DESHPKTLYVGNLDPSVT--EVFLC-TLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXX 291
D +TL+VGNL+ ++ ++ L FG + DV + R GN YAF++F
Sbjct: 232 DPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGN-TYAFVKFADLDVA 290
Query: 292 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPF 471
M + + +K+ + S Q T ++VG L P I L F F
Sbjct: 291 AKAKCAMQGQCIGRNHIKIGYGRS---QQTT------RLWVGGLGPWISIPELEREFDRF 341
Query: 472 GEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 639
G I R K +A++ + A A + M G +G R +R +++ ++
Sbjct: 342 GAI------RRIDYRKGGDHAYILYDSLDAASVAAREMRGFQMGDRRLRIDFADKE 391
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 35.9 bits (79), Expect = 0.029
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Frame = +1
Query: 136 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 315
K L V +LD T L F + G++ G ++ A + F + N
Sbjct: 236 KKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEKRTCAAIVFFRNLKDIKKVVEEN 295
Query: 316 KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEI-ETNILREAFAPFGEISNCR 492
+ K +KV P N+ K +FV +LS + E ++LR F P+G+++
Sbjct: 296 HTI---KGLKVRTVQLP-NEEKQGV-RERTLFVDNLSEDTKELDVLRY-FRPYGQVAKVH 349
Query: 493 IVRDPQTLKSKGYAFV 540
I+ D +T KSKG V
Sbjct: 350 ILTDRETGKSKGCGVV 365
Score = 35.5 bits (78), Expect = 0.038
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 376 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 546
PK N +FVG L+ + L++ F FGE+ + RI+R S+ Y FV F
Sbjct: 72 PKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGY-SRNYGFVLF 127
Score = 33.1 bits (72), Expect = 0.20
Identities = 30/127 (23%), Positives = 51/127 (40%)
Frame = +1
Query: 124 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXX 303
E + ++++VG L E L F Q G+V+ +I+R FL ++ +
Sbjct: 76 EKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-------TFLGYSRNYGFVLFK 128
Query: 304 XXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEIS 483
+ VL K +N T + + N I+VG L +RE F FG I
Sbjct: 129 DDGPSKEVLKKSHVINGKTVDVGKSR----NFRVIYVGGLPSHFTEQTVREHFKKFGVIE 184
Query: 484 NCRIVRD 504
+ + +
Sbjct: 185 AVKFIEN 191
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 346 VNWATSPGNQPKTDTSNHHHIF-VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKS 522
++ AT G + + H V +L + +L +AF+ FG++ +V D + +S
Sbjct: 107 LDMATRKGRTLRVRFATHAAALRVKNLDNLVTNELLEQAFSQFGDVERAVVVCDVRG-RS 165
Query: 523 KGYAFVSFVKKADAEAAIQAMN 588
KG+ V F +K +A A+Q ++
Sbjct: 166 KGHGIVEFSRKNNAHNAMQKIS 187
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+FVG+L + + ++E F +GE++ I K KG+ F+ + AEAA +
Sbjct: 55 LFVGNLI-DCDEEEMKEMFKKYGEVAEVFIN------KEKGFGFIRLDTRLHAEAAKAGL 107
Query: 586 NGQWLGSRSIRTNWST 633
+ R++R ++T
Sbjct: 108 DMATRKGRTLRVRFAT 123
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+F+G + + + L F G I + R++ DP + +KG+AF +F K +A+ A++ +
Sbjct: 154 VFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVKKL 213
Query: 586 NGQ 594
+ +
Sbjct: 214 DNK 216
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/71 (22%), Positives = 36/71 (50%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+++G L + F +G + + + R+P G+AF F + DAE A++ +
Sbjct: 34 VYIGSLGDNASKREIENEFGYYGPLKDVWVARNPP-----GFAFCIFDDRRDAEDAVREL 88
Query: 586 NGQWLGSRSIR 618
+G+++ + +R
Sbjct: 89 DGRYICGQRVR 99
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 35.1 bits (77), Expect = 0.050
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGE-ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI 576
IFVG L P + + E F+ GE + + + +R KSKG+AFV KK E+ +
Sbjct: 44 IFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSG-KSKGFAFVRLRKKEAVESVL 100
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+FVG + ++ + L F G I R++ D +++GYAFV + K DA+ ++ +
Sbjct: 76 VFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNG-QNRGYAFVVYTSKDDAKRCVKTL 134
Query: 586 N 588
N
Sbjct: 135 N 135
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+++G++ + F FG + + + R+P G+AF F + DAE A++ +
Sbjct: 4 VYIGNIGDNASKREIEREFETFGPLRDVWVARNPP-----GFAFCVFEDRRDAEDAVREL 58
Query: 586 NGQWL-GSRS 612
+G+++ G R+
Sbjct: 59 DGRYICGQRA 68
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 469 FGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 591
+GEI N +VRD +T K KG+ F+ + + A+ NG
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNG 42
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 34.7 bits (76), Expect = 0.066
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 340 MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLK 519
M V T+ G D SN +FVG + E LR F P+G+I I++D T +
Sbjct: 151 MDVKTITNGGTTSVRD-SNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQ 209
Query: 520 SKG--YAFVSFVKKADAEAAIQAM 585
K FV + K E ++ M
Sbjct: 210 HKDDRKLFVGMISKHAKEEDLRVM 233
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRD 504
+FVG +S + LR F+PFG I ++R+
Sbjct: 216 LFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 34.3 bits (75), Expect = 0.087
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 391 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG--YAFVSFVKKADA 564
SN ++VG+L ++ L + F +G I++ D + + G +AFV F DA
Sbjct: 258 SNDCRVYVGNLPQDVREKDLHDIFYKYGHIADV----DLKNRRGAGPPFAFVEFEDPRDA 313
Query: 565 EAAIQAMNGQWLGSRSIRTNW 627
E A++ +G IR +
Sbjct: 314 EDAVKGRDGHEFDGYRIRVEF 334
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 109 ANMG-DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG-NDPYAFLEF 273
+NM S+ +YVGNL V E L +F + G + + G P+AF+EF
Sbjct: 251 SNMNRSNSNDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEF 307
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 448 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 588
L++ F+ FG++ + R + KG+AF+ F K AE +Q N
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFN 150
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 136 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG 246
KTL+V N+ P T++ + LFG+ G VK + ++PG
Sbjct: 42 KTLFVINVPPYCTKLAIKKLFGKCGGVKSVYLHKQPG 78
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
I+V ++ + L+ F +G+I R +RD Y FV F K+ A AI +
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRD--------YGFVYFAKRESAVQAIDGI 55
Query: 586 NGQWL 600
NG ++
Sbjct: 56 NGAYI 60
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 585
+FV P+ + N +AF +V + + K +GYAF+ + + D AA +
Sbjct: 8 VFVYSGDPQTDPNAYGDAFKTLFIGRIISMVYNSKASKPRGYAFIEYEHERDMHAAYKHA 67
Query: 586 NGQWLGSRSI 615
+G+ + R I
Sbjct: 68 DGKKIDGRRI 77
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 391 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 528
SN +FVG++ ++ L++ F FG++ +I+ D +SKG
Sbjct: 76 SNKCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREA-FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 582
I++ +L+ +I+ L+++ +A F + + +TLK +G AFV F A A+++
Sbjct: 9 IYIKNLNEKIKKEELKKSLYAIFSQFGPILDIVALKTLKMRGQAFVVFKDIGSATNALRS 68
Query: 583 MNGQWLGSRSIRTNWSTRKPPA 648
M G + +R ++ K A
Sbjct: 69 MQGFPFYDKPMRIQYAKGKSDA 90
>SB_9041| Best HMM Match : RRM_1 (HMM E-Value=1.4e-10)
Length = 141
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 148 VGNLDPSVTEVFLCTLFGQIGDVKGCKIIR 237
+ NL P+V+ + LFG IG +K CK++R
Sbjct: 20 ISNLHPAVSRQDIEELFGAIGVLKSCKMLR 49
>SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 148 VGNLDPSVTEVFLCTLFGQIGDVKGCKIIR 237
+ NL P+V+ + LFG IG +K CK++R
Sbjct: 225 ISNLHPAVSRQDIEELFGAIGVLKSCKMLR 254
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 406 IFVGDLSPEIETNILREAFAPFGEISN--CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 579
+FVG L P+I+ + + +F FG ++ KGYAF+ ++++ + I
Sbjct: 346 VFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKLIS 405
Query: 580 A 582
A
Sbjct: 406 A 406
>SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085)
Length = 292
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Frame = +1
Query: 391 SNHHHIFVGDLSPEIETNI----LREAFAPFGEISNCRIV--------RDPQTLKSKGYA 534
SN ++++ +S +++ LR F+ FG I ++V PQ L
Sbjct: 19 SNDVNLYITGISKKLDAEQAEIKLRGIFSRFGLIYEVQVVDTLSSENVEGPQFLGGNTGG 78
Query: 535 FVSFVKKADAEAAIQA---MNGQWL-GSRSIRTNWSTRKPPA 648
+FVK A+AA++A +NG+WL ++ +++RK P+
Sbjct: 79 LYAFVKFYSAKAALRAKEEVNGKWLIDGNILKVQFASRKKPS 120
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 454 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 591
E F+ FG++ + D +S G A V FV++ DA+ A++ NG
Sbjct: 1 ELFSEFGQVKRSCVHYDASG-RSHGTAEVVFVRREDAQQALKQYNG 45
>SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095)
Length = 142
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/91 (24%), Positives = 44/91 (48%)
Frame = +1
Query: 322 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 501
++LD+ K+ T + + HH I G +P I+ N LRE +A F +++
Sbjct: 3 IILDEGHKIKNVTKTSKNVRAIPAKHHFILTG--TP-IQNN-LREMWALFDFTCQGQLLG 58
Query: 502 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQ 594
+T K + + ++ ++ DA A + + G+
Sbjct: 59 SSKTFKQEYESPITRARERDASAYEKRIGGE 89
>SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +1
Query: 376 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 555
P ++T+ +F+ +LS +++ L F F + ++V + KG AFV+F
Sbjct: 106 PLSETNFAETLFLKNLSNKVKEEDLIRLFLRFQQNGAPKLVFRLMKGRMKGQAFVTF--- 162
Query: 556 ADAEAAIQA---MNGQWLGSRSIRTNWSTRKPPA 648
D+E AI+A +NG L R + + ++ A
Sbjct: 163 PDSEVAIKAHSLVNGYRLKGRPVIIEFGRKREKA 196
>SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 365
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 336 LVEDHSLVHGGQRCGRRRVTRKLEKCIRVISWLPYNLATFYIAYL 202
LV D+S C RRRV R + K I+ + + TF+ ++
Sbjct: 224 LVSDNSFSDSSDECERRRVQRCIRKRIKTTKNILLVVCTFFFCWM 268
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 364 PGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 543
P + K +F+G L I +I+ E F GEI++ RI + + ++ + +
Sbjct: 339 PMQKQKEKPEGCRTVFIGGLPESINEHIINEIFYVCGEITSIRISKG-KGENARKFCHLR 397
Query: 544 FVKKADAEAAI 576
F K + A+
Sbjct: 398 FGAKESVDTAV 408
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +1
Query: 313 NKRVVLDKEMKVNWATSPGNQPKTDTSNHH--HIFVGD--LSPEIETNILREAFAPFGEI 480
+++ L K+ + + S N D S HI VG+ L ++ + F+ +G +
Sbjct: 17 SEKKALRKQARKVHSLSKHNSELADVSIEPTPHILVGNGGLMCGVDRESITRVFSLYGTL 76
Query: 481 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRT 621
R+V PQ + Y+FVS+ +A A++ +NG+ L +R+
Sbjct: 77 E--RVVMLPQ----RSYSFVSYKSHNNALNAMRNLNGKALDEFGLRS 117
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 523 KGYAFVSFVKKADAEAAIQAMNGQ-WLGSRSI 615
+GY FV F DAE A+ +NG+ +G R +
Sbjct: 722 RGYGFVEFDDHRDAEDAVHDLNGRDLIGERVV 753
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2
Query: 607 LIPATGHSLPGWQLRHLLSLQMIQKHNPWI*AFEDRVLCDSSISHQMERRPL 452
L ATG + GWQ+ HL +K+ + A+ R L D I R L
Sbjct: 3414 LAKATGGASRGWQIIHLCGRSDRRKNKLLLGAWNVRTLMDRGIIRPQRRTAL 3465
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,359,747
Number of Sequences: 59808
Number of extensions: 455921
Number of successful extensions: 1128
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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