Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0662
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   0.79 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   0.79 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   0.79 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.79 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.3  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 659 VSAEHSTIFDSXKLFCQFLSLFQ*NRLLFYFS 564
           + A   T+    K+F + L++ + NRL FY S
Sbjct: 80  LGATFVTVLQLHKIFAKGLNVIEANRLFFYCS 111


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 659 VSAEHSTIFDSXKLFCQFLSLFQ*NRLLFYFS 564
           + A   T+    K+F + L++ + NRL FY S
Sbjct: 80  LGATFVTVLQLHKIFAKGLNVIEANRLFFYCS 111


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 659 VSAEHSTIFDSXKLFCQFLSLFQ*NRLLFYFS 564
           + A   T+    K+F + L++ + NRL FY S
Sbjct: 80  LGATFVTVLQLHKIFAKGLNVIEANRLFFYCS 111


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 9/40 (22%), Positives = 19/40 (47%)
 Frame = +3

Query: 480 THHQQKTPFLLVGTQIDLRDDSATMEKLAKIKQKPVSLEQ 599
           THH  K P   +GT + +      +E++  +    +++ Q
Sbjct: 276 THHLDKNPENTLGTMLSIHPSKLDVEQMNLLHSNDLNMHQ 315


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 106 EPNSPYNKRKFGV-QIVKKQ 162
           EP SP+   +FGV QIVK++
Sbjct: 27  EPRSPHTAWQFGVSQIVKRE 46


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 462 KWVPEITHHQQKTPFLLVGTQIDL 533
           K   ++ +   KT  LLVG +ID+
Sbjct: 211 KRASDLCNEANKTKILLVGLKIDI 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,918
Number of Sequences: 336
Number of extensions: 3635
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)