BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0662 (700 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 270 2e-73 SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 186 3e-48 SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 178 7e-46 SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 155 6e-39 SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 150 2e-37 SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 127 2e-30 SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 77 2e-15 SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 76 4e-15 SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 76 6e-15 SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 71 2e-13 SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 68 1e-12 SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 67 3e-12 SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 65 1e-11 SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 64 1e-11 SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 60 4e-10 SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 59 7e-10 SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 58 2e-09 SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 45 9e-06 SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 33 0.039 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.48 SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 28 1.1 SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 28 1.5 SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.4 SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 26 6.0 SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 26 6.0 SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 25 7.9 SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 25 7.9 >SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces pombe|chr 1|||Manual Length = 192 Score = 270 bits (661), Expect = 2e-73 Identities = 125/154 (81%), Positives = 136/154 (88%) Frame = +3 Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356 M TIKCVVVGDGAVGKTCLLISYTTNKFPS+YVPTVFDNYAVTVMIG EPYTLGLFDTAG Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAG 60 Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLR 536 QEDYDRLRPLSYPQTDVFLVCFSV SP+SFENVKEKW PE+ HH P L+VGTQIDLR Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLR 120 Query: 537 DDSATMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638 DD + +KLA+ Q P++ EQGE+LA+EL AVKY Sbjct: 121 DDPSVQQKLARQHQHPLTHEQGERLARELGAVKY 154 Score = 40.7 bits (91), Expect = 2e-04 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = +1 Query: 616 KSLXLSNMVECSALTQKGLKNVFDXAIL 699 + L VECSALTQKGLKNVFD AI+ Sbjct: 147 RELGAVKYVECSALTQKGLKNVFDEAIV 174 >SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 186 bits (453), Expect = 3e-48 Identities = 82/150 (54%), Positives = 109/150 (72%) Frame = +3 Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368 K V+VGDGA GKTCLLI ++ FP YVPTVF+NY V + G L L+DTAGQEDY Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDY 67 Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548 DRLRPLSYP + V L+CFSV +P S +NV+EKW+ E+ H P LLVG ++DLR+D Sbjct: 68 DRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPK 127 Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638 T+E+L+K QKP++ E+G+ +A+++ A KY Sbjct: 128 TIEELSKTSQKPITFEEGQVVAQKIGAYKY 157 >SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pombe|chr 1|||Manual Length = 202 Score = 178 bits (433), Expect = 7e-46 Identities = 80/150 (53%), Positives = 105/150 (70%) Frame = +3 Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368 K V+VGDGA GKTCLLI ++ FP YVPTVF+NY V + G L L+DTAGQEDY Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDY 67 Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548 DRLRPLSYP + V L+CF+V SP S +NV+EKW+ E+ H P LLV + DLR+D Sbjct: 68 DRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPK 127 Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638 +E+L+K Q PV+ E+G+ +A+++ A KY Sbjct: 128 IIEELSKTNQHPVTTEEGQAVAQKIGAYKY 157 >SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces pombe|chr 1|||Manual Length = 203 Score = 155 bits (376), Expect = 6e-39 Identities = 74/149 (49%), Positives = 96/149 (64%), Gaps = 2/149 (1%) Frame = +3 Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIG--GEPYTLGLFDTAGQE 362 K VVVGDG GKTCLLI +++ FP YVPTVF+NY + G + L L+DTAGQE Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75 Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDD 542 +YDRLRPLSYP ++V L+CFS+ P+S NV EKW PE+ H +TP +LVG + DLR D Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135 Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKELXA 629 E L PV+ +Q + +A + A Sbjct: 136 RNATEVLRTQGLTPVTYQQAQSVALSMNA 164 >SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 150 bits (363), Expect = 2e-37 Identities = 72/150 (48%), Positives = 96/150 (64%) Frame = +3 Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368 K VVVGDGA GKT LL +T FP+EYVPTVF+NY + G+ L L+DTAGQE+Y Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEY 69 Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548 +RLRP+SY + + LV F++ SP S ENV KW+ EI PF+LVG + DLR D Sbjct: 70 ERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPV 129 Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638 +E++ + Q V +Q E +A+ + A KY Sbjct: 130 AIEEMRRRNQNFVKSQQAELVAQRIGARKY 159 >SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces pombe|chr 1|||Manual Length = 205 Score = 127 bits (306), Expect = 2e-30 Identities = 64/150 (42%), Positives = 89/150 (59%) Frame = +3 Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368 K V++GDGA GKT LL +T FP Y PT+F+NY + + G L L+DTAGQE+Y Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74 Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548 D+LR LSY T V ++CF+V S S ENV KW+PE++ + +LV + DLR Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADE 134 Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638 +KI + E+G AK++ AV+Y Sbjct: 135 EQVDHSKI----IDYEEGLAAAKKINAVRY 160 >SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr 1|||Manual Length = 219 Score = 77.4 bits (182), Expect = 2e-15 Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 1/150 (0%) Frame = +3 Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356 ++ K VVVGDG VGK+ L I + F EY PT+ D+Y I GE L + DTAG Sbjct: 6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAG 65 Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDL 533 QE+Y +R + FL+ +++ S SSF+ + + + + T P +LV + DL Sbjct: 66 QEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDL 125 Query: 534 RDDSATMEKLAKIKQKPVSLEQGEKLAKEL 623 ++ VS +GE+LAK + Sbjct: 126 E------------AERVVSRAEGEQLAKSM 143 >SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 76.2 bits (179), Expect = 4e-15 Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 2/153 (1%) Frame = +3 Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 362 IK +++GD VGK+CLL+ ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69 Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPF-LLVGTQIDLRD 539 + + Y L+ + V SF+NV+ W + H + + +L+G + D D Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDNVR-TWFSNVEQHASENVYKILIGNKCDCED 128 Query: 540 DSATMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638 Q+ VS EQG+ LA EL VK+ Sbjct: 129 ------------QRQVSFEQGQALADEL-GVKF 148 >SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr 1|||Manual Length = 208 Score = 75.8 bits (178), Expect = 6e-15 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%) Frame = +3 Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 362 +K V++GD VGKTCL+ + KF EY T+ D V++ + TL L+DTAGQE Sbjct: 9 LKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQE 68 Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT----PFLLVGTQID 530 + L Y D ++ ++V + SF++V E W E + + PF++VG QID Sbjct: 69 RFQSLGMAFYRGADCCVIVYNVNNSKSFDSV-ENWRQEFLYQTSQDECAFPFIIVGNQID 127 >SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2|||Manual Length = 203 Score = 70.9 bits (166), Expect = 2e-13 Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%) Frame = +3 Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365 K +++GD VGK+CLL+ + + + Y+ T+ ++ + T + G+ L ++DTAGQE Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69 Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQ-QKTPFLLVGTQIDLRDD 542 + + Y ++ + V SF NVK+ W+ EI + + LLVG + D+ D Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAVEGVNRLLVGNKSDMVDK 128 Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKELXAVKYGRMLSAYPERLKERV 683 +AK +++ E AK+ V+ + + ++KER+ Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMS--RQIKERM 173 >SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2|||Manual Length = 205 Score = 67.7 bits (158), Expect = 1e-12 Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 5/134 (3%) Frame = +3 Query: 174 KMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDT 350 K +K +++G+ VGKT ++ Y KF +Y T+ ++ V++ + TL L+DT Sbjct: 5 KKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDT 64 Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV---KEKWVPEITHHQQKT-PFLLVG 518 AGQE + L Y D ++ + V + SFE + +++++ + + +T PF+L+G Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLG 124 Query: 519 TQIDLRDDSATMEK 560 ++D+ + + K Sbjct: 125 NKVDVEEQKRMVSK 138 >SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr 1|||Manual Length = 201 Score = 66.9 bits (156), Expect = 3e-12 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 2/155 (1%) Frame = +3 Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTA 353 ++ K V +G+ +VGKT L+ + ++F + Y T+ D + T+ + L L+DTA Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68 Query: 354 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQID 530 GQE + L P + V ++ + + + +SF N EKW+ ++ +LVG + D Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNT-EKWIEDVRAERGDDVIIVLVGNKTD 127 Query: 531 LRDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVK 635 L D ++ + K K + + E AK VK Sbjct: 128 LADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVK 162 >SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr 2|||Manual Length = 185 Score = 64.9 bits (151), Expect = 1e-11 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%) Frame = +3 Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368 + V+G +VGK+ L + Y N F Y PT+ + ++ + G+ + + DTAGQ++Y Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEY 67 Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HQQKTPFLLVGTQIDLRDDS 545 L +++ +S+ S SSFE VK + H + P ++VG + DL Sbjct: 68 SILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLH--- 124 Query: 546 ATMEKLAKIKQKPVSLEQGEKLAKE 620 Q+ V+ E+G+ LA E Sbjct: 125 ---------MQRAVTAEEGKALANE 140 >SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1|||Manual Length = 214 Score = 64.5 bits (150), Expect = 1e-11 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 2/117 (1%) Frame = +3 Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365 K V++GD VGK+ LL+ +T N+F E T+ +A +++ + ++DTAGQE Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71 Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDL 533 Y + Y L+ + + SSF+NV +W+ E+ H +LVG + DL Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNV-GRWLKELREHADSNIVIMLVGNKTDL 127 >SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr 2|||Manual Length = 216 Score = 59.7 bits (138), Expect = 4e-10 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 1/120 (0%) Frame = +3 Query: 183 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 359 T K V+VGDG GKT + + T +F +Y+ T+ + + + ++DTAGQ Sbjct: 9 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQ 68 Query: 360 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 539 E LR Y Q ++ F V S +++NV W ++ + P +L G ++D+++ Sbjct: 69 EKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPH-WWRDLVRVCENIPIVLCGNKVDVKE 127 >SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||Manual Length = 211 Score = 58.8 bits (136), Expect = 7e-10 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%) Frame = +3 Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT--LGLFDTAGQE 362 K V++GD AVGK+ L++ + ++F T+ + + E + L ++DTAGQE Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75 Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRD 539 Y L P+ Y + +V + + +S E K W+ E+ + L G ++DL Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAK-SWIKELQRQAPEGIVIALAGNKLDLAQ 134 Query: 540 DSATMEK 560 + +EK Sbjct: 135 ERRAVEK 141 >SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr 1|||Manual Length = 198 Score = 57.6 bits (133), Expect = 2e-09 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%) Frame = +3 Query: 183 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQ 359 TIK ++GD ++GKT L+++Y F E T+ N+ T+ I T ++D GQ Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69 Query: 360 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQID 530 ++ + P+ L F + S+ ++KE W + + +L+GT+ D Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKE-WYRQARGFNKTAVPILIGTKYD 125 >SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1|||Manual Length = 234 Score = 45.2 bits (102), Expect = 9e-06 Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 6/124 (4%) Frame = +3 Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV---FDNYAVTVMIGGEP--YTLGLFDT 350 +K V+ G GK+CLL + N++ + TV F + ++V +G + L ++DT Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69 Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQI 527 AGQE + + Y ++ + V + SFE + W+ +I T +L G++ Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL-SSWLSDIRAMAPSTICVVLAGSKS 128 Query: 528 DLRD 539 DL++ Sbjct: 129 DLQN 132 >SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 630 Score = 33.1 bits (72), Expect = 0.039 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 1/115 (0%) Frame = +3 Query: 192 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 371 C VVG + GKT LL S+ N + P N +V L L + G+ D D Sbjct: 424 CFVVGSKSCGKTALLSSFINNN-TNRLTPNTVVN---SVEFQSTQRYLVLSE-IGETDLD 478 Query: 372 RL-RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDL 533 L P S D+ + + +P+SF + + + QK P + T+ DL Sbjct: 479 ILAEPKSLEACDILCLLYDSSNPNSFSFIAN--LLNLYPDLQKIPCVFAATKADL 531 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 29.5 bits (63), Expect = 0.48 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 153 EETTNCLKMQTIKCVVVGDGAVGKTCLL 236 E C+ + C++VGD A GKTC+L Sbjct: 1860 ESVITCINKKW-PCILVGDTATGKTCIL 1886 >SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 1687 Score = 28.3 bits (60), Expect = 1.1 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = -3 Query: 575 FYFSKFLHCSRIIAQVYLRPNQQ-KRCLLLMMSYFRDPLFLYIFK 444 FYF + L C + Q+YL N + +C+ + S+ D YI K Sbjct: 1111 FYFCEPLECVETLVQIYLENNVECCQCIWDIFSFLSDSEPQYIVK 1155 >SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces pombe|chr 1|||Manual Length = 464 Score = 27.9 bits (59), Expect = 1.5 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Frame = +3 Query: 186 IKCVVVGDGAVGKTCLLISY----TTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 353 I +VVG+ ++GKT + S+ TN P + + F + T+ G + + L + DT Sbjct: 119 INLIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMD--FVEHKATLSDGDQKFNLTIVDTP 176 Query: 354 GQED 365 G D Sbjct: 177 GFGD 180 >SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 682 Score = 26.6 bits (56), Expect = 3.4 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -2 Query: 543 NHRASLFASQPTKTVSSVDDELFQGPTFPLHFQMN*GSQH 424 NH+ S + QP + +SV ++ GPT MN + H Sbjct: 336 NHQPSYTSEQPMYSTASVPQQISNGPTAVNGLPMNSYTPH 375 >SPAC139.03 |||transcription factor, zf-fungal binuclear cluster type |Schizosaccharomyces pombe|chr 1|||Manual Length = 625 Score = 25.8 bits (54), Expect = 6.0 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = +3 Query: 129 KKIWCTNCEETTNCLKMQTIK-CVVVGDG 212 KK+ C + +NCLK TI+ C+ + G Sbjct: 29 KKLKCDHGRPCSNCLKRSTIQSCIYIDPG 57 >SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schizosaccharomyces pombe|chr 2|||Manual Length = 470 Score = 25.8 bits (54), Expect = 6.0 Identities = 9/27 (33%), Positives = 16/27 (59%) Frame = -1 Query: 196 THFIVCIFKQLVVSSQFVHQIFFYYRD 116 +H I +F QL+ + + H + Y+RD Sbjct: 117 SHLIKTVFLQLISAVEHCHSVGIYHRD 143 >SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 703 Score = 25.4 bits (53), Expect = 7.9 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = -1 Query: 208 SPTTTHFIVCIFKQLVVSSQFVHQIFFYYRDYLVHSKL 95 SP TH +VC L S F+ + R ++ S L Sbjct: 254 SPNKTHVVVCSTDDLTAISSFILSSIYKIRKVVIISLL 291 >SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 2100 Score = 25.4 bits (53), Expect = 7.9 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +3 Query: 405 VFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLV 515 V L CF + P SF W+ I+H LLV Sbjct: 1740 VILECFLAIQPRSFPAFTFAWLSLISHSYLLPKVLLV 1776 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,831,219 Number of Sequences: 5004 Number of extensions: 59990 Number of successful extensions: 193 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 183 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 323158234 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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