SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0662
         (700 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p...   270   2e-73
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p...   186   3e-48
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom...   178   7e-46
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p...   155   6e-39
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb...   150   2e-37
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po...   127   2e-30
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch...    77   2e-15
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|...    76   4e-15
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr...    76   6e-15
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||...    71   2e-13
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||...    68   1e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr...    67   3e-12
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch...    65   1e-11
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||...    64   1e-11
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch...    60   4e-10
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||...    59   7e-10
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch...    58   2e-09
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||...    45   9e-06
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma...    33   0.039
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        29   0.48 
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c...    28   1.1  
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p...    28   1.5  
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    27   3.4  
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ...    26   6.0  
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi...    26   6.0  
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr...    25   7.9  
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce...    25   7.9  

>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 192

 Score =  270 bits (661), Expect = 2e-73
 Identities = 125/154 (81%), Positives = 136/154 (88%)
 Frame = +3

Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356
           M TIKCVVVGDGAVGKTCLLISYTTNKFPS+YVPTVFDNYAVTVMIG EPYTLGLFDTAG
Sbjct: 1   MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAG 60

Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLR 536
           QEDYDRLRPLSYPQTDVFLVCFSV SP+SFENVKEKW PE+ HH    P L+VGTQIDLR
Sbjct: 61  QEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLR 120

Query: 537 DDSATMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
           DD +  +KLA+  Q P++ EQGE+LA+EL AVKY
Sbjct: 121 DDPSVQQKLARQHQHPLTHEQGERLARELGAVKY 154



 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +1

Query: 616 KSLXLSNMVECSALTQKGLKNVFDXAIL 699
           + L     VECSALTQKGLKNVFD AI+
Sbjct: 147 RELGAVKYVECSALTQKGLKNVFDEAIV 174


>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 200

 Score =  186 bits (453), Expect = 3e-48
 Identities = 82/150 (54%), Positives = 109/150 (72%)
 Frame = +3

Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
           K V+VGDGA GKTCLLI ++   FP  YVPTVF+NY   V + G    L L+DTAGQEDY
Sbjct: 8   KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDY 67

Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548
           DRLRPLSYP + V L+CFSV +P S +NV+EKW+ E+ H     P LLVG ++DLR+D  
Sbjct: 68  DRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPK 127

Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
           T+E+L+K  QKP++ E+G+ +A+++ A KY
Sbjct: 128 TIEELSKTSQKPITFEEGQVVAQKIGAYKY 157


>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 202

 Score =  178 bits (433), Expect = 7e-46
 Identities = 80/150 (53%), Positives = 105/150 (70%)
 Frame = +3

Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
           K V+VGDGA GKTCLLI ++   FP  YVPTVF+NY   V + G    L L+DTAGQEDY
Sbjct: 8   KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDY 67

Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548
           DRLRPLSYP + V L+CF+V SP S +NV+EKW+ E+ H     P LLV  + DLR+D  
Sbjct: 68  DRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPK 127

Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
            +E+L+K  Q PV+ E+G+ +A+++ A KY
Sbjct: 128 IIEELSKTNQHPVTTEEGQAVAQKIGAYKY 157


>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 203

 Score =  155 bits (376), Expect = 6e-39
 Identities = 74/149 (49%), Positives = 96/149 (64%), Gaps = 2/149 (1%)
 Frame = +3

Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIG--GEPYTLGLFDTAGQE 362
           K VVVGDG  GKTCLLI +++  FP  YVPTVF+NY   +  G   +   L L+DTAGQE
Sbjct: 16  KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75

Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDD 542
           +YDRLRPLSYP ++V L+CFS+  P+S  NV EKW PE+ H   +TP +LVG + DLR D
Sbjct: 76  EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135

Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKELXA 629
               E L      PV+ +Q + +A  + A
Sbjct: 136 RNATEVLRTQGLTPVTYQQAQSVALSMNA 164


>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 200

 Score =  150 bits (363), Expect = 2e-37
 Identities = 72/150 (48%), Positives = 96/150 (64%)
 Frame = +3

Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
           K VVVGDGA GKT LL  +T   FP+EYVPTVF+NY     + G+   L L+DTAGQE+Y
Sbjct: 10  KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEY 69

Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548
           +RLRP+SY +  + LV F++ SP S ENV  KW+ EI       PF+LVG + DLR D  
Sbjct: 70  ERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPV 129

Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
            +E++ +  Q  V  +Q E +A+ + A KY
Sbjct: 130 AIEEMRRRNQNFVKSQQAELVAQRIGARKY 159


>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 205

 Score =  127 bits (306), Expect = 2e-30
 Identities = 64/150 (42%), Positives = 89/150 (59%)
 Frame = +3

Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
           K V++GDGA GKT LL  +T   FP  Y PT+F+NY   + + G    L L+DTAGQE+Y
Sbjct: 15  KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74

Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548
           D+LR LSY  T V ++CF+V S  S ENV  KW+PE++ +      +LV  + DLR    
Sbjct: 75  DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADE 134

Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
                +KI    +  E+G   AK++ AV+Y
Sbjct: 135 EQVDHSKI----IDYEEGLAAAKKINAVRY 160


>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 219

 Score = 77.4 bits (182), Expect = 2e-15
 Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
 Frame = +3

Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356
           ++  K VVVGDG VGK+ L I    + F  EY PT+ D+Y     I GE   L + DTAG
Sbjct: 6   LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAG 65

Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDL 533
           QE+Y  +R       + FL+ +++ S SSF+ +   +   +    + T P +LV  + DL
Sbjct: 66  QEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDL 125

Query: 534 RDDSATMEKLAKIKQKPVSLEQGEKLAKEL 623
                         ++ VS  +GE+LAK +
Sbjct: 126 E------------AERVVSRAEGEQLAKSM 143


>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 200

 Score = 76.2 bits (179), Expect = 4e-15
 Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
 Frame = +3

Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 362
           IK +++GD  VGK+CLL+ ++ + F   ++ T+  ++ + T+ + G+   L ++DTAGQE
Sbjct: 10  IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69

Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPF-LLVGTQIDLRD 539
            +  +    Y      L+ + V    SF+NV+  W   +  H  +  + +L+G + D  D
Sbjct: 70  RFRTITTAYYRGAMGILLLYDVTDKKSFDNVR-TWFSNVEQHASENVYKILIGNKCDCED 128

Query: 540 DSATMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
                       Q+ VS EQG+ LA EL  VK+
Sbjct: 129 ------------QRQVSFEQGQALADEL-GVKF 148


>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 208

 Score = 75.8 bits (178), Expect = 6e-15
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
 Frame = +3

Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 362
           +K V++GD  VGKTCL+  +   KF  EY  T+  D     V++  +  TL L+DTAGQE
Sbjct: 9   LKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQE 68

Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT----PFLLVGTQID 530
            +  L    Y   D  ++ ++V +  SF++V E W  E  +   +     PF++VG QID
Sbjct: 69  RFQSLGMAFYRGADCCVIVYNVNNSKSFDSV-ENWRQEFLYQTSQDECAFPFIIVGNQID 127


>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 203

 Score = 70.9 bits (166), Expect = 2e-13
 Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
 Frame = +3

Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365
           K +++GD  VGK+CLL+ +  + +   Y+ T+  ++ + T  + G+   L ++DTAGQE 
Sbjct: 10  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69

Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQ-QKTPFLLVGTQIDLRDD 542
           +  +    Y      ++ + V    SF NVK+ W+ EI  +  +    LLVG + D+ D 
Sbjct: 70  FRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAVEGVNRLLVGNKSDMVDK 128

Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKELXAVKYGRMLSAYPERLKERV 683
                 +AK     +++   E  AK+   V+   +  +   ++KER+
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMS--RQIKERM 173


>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 205

 Score = 67.7 bits (158), Expect = 1e-12
 Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
 Frame = +3

Query: 174 KMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDT 350
           K   +K +++G+  VGKT ++  Y   KF  +Y  T+  ++    V++  +  TL L+DT
Sbjct: 5   KKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDT 64

Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV---KEKWVPEITHHQQKT-PFLLVG 518
           AGQE +  L    Y   D  ++ + V +  SFE +   +++++ + +    +T PF+L+G
Sbjct: 65  AGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLG 124

Query: 519 TQIDLRDDSATMEK 560
            ++D+ +    + K
Sbjct: 125 NKVDVEEQKRMVSK 138


>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 201

 Score = 66.9 bits (156), Expect = 3e-12
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
 Frame = +3

Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTA 353
           ++  K V +G+ +VGKT L+  +  ++F + Y  T+  D  + T+ +      L L+DTA
Sbjct: 9   LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68

Query: 354 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQID 530
           GQE +  L P     + V ++ + + + +SF N  EKW+ ++          +LVG + D
Sbjct: 69  GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNT-EKWIEDVRAERGDDVIIVLVGNKTD 127

Query: 531 LRDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVK 635
           L D     ++  + K K + +   E  AK    VK
Sbjct: 128 LADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVK 162


>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 185

 Score = 64.9 bits (151), Expect = 1e-11
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
 Frame = +3

Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
           +  V+G  +VGK+ L + Y  N F   Y PT+ + ++  +   G+ +   + DTAGQ++Y
Sbjct: 8   RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEY 67

Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HQQKTPFLLVGTQIDLRDDS 545
             L          +++ +S+ S SSFE VK      + H   +  P ++VG + DL    
Sbjct: 68  SILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLH--- 124

Query: 546 ATMEKLAKIKQKPVSLEQGEKLAKE 620
                     Q+ V+ E+G+ LA E
Sbjct: 125 ---------MQRAVTAEEGKALANE 140


>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 214

 Score = 64.5 bits (150), Expect = 1e-11
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
 Frame = +3

Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365
           K V++GD  VGK+ LL+ +T N+F  E   T+   +A   +++  +     ++DTAGQE 
Sbjct: 12  KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71

Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDL 533
           Y  +    Y      L+ + +   SSF+NV  +W+ E+  H       +LVG + DL
Sbjct: 72  YRAITSAYYRGAVGALIVYDITKQSSFDNV-GRWLKELREHADSNIVIMLVGNKTDL 127


>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 216

 Score = 59.7 bits (138), Expect = 4e-10
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
 Frame = +3

Query: 183 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 359
           T K V+VGDG  GKT  +  + T +F  +Y+ T+  + + +            ++DTAGQ
Sbjct: 9   TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQ 68

Query: 360 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 539
           E    LR   Y Q    ++ F V S  +++NV   W  ++    +  P +L G ++D+++
Sbjct: 69  EKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPH-WWRDLVRVCENIPIVLCGNKVDVKE 127


>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 211

 Score = 58.8 bits (136), Expect = 7e-10
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
 Frame = +3

Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT--LGLFDTAGQE 362
           K V++GD AVGK+ L++ +  ++F      T+   +    +   E  +  L ++DTAGQE
Sbjct: 16  KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75

Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRD 539
            Y  L P+ Y   +  +V + +   +S E  K  W+ E+     +     L G ++DL  
Sbjct: 76  RYKSLAPMYYRNANCAIVVYDITQAASLEKAK-SWIKELQRQAPEGIVIALAGNKLDLAQ 134

Query: 540 DSATMEK 560
           +   +EK
Sbjct: 135 ERRAVEK 141


>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 198

 Score = 57.6 bits (133), Expect = 2e-09
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
 Frame = +3

Query: 183 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQ 359
           TIK  ++GD ++GKT L+++Y    F  E   T+  N+   T+ I     T  ++D  GQ
Sbjct: 10  TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69

Query: 360 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQID 530
            ++  + P+        L  F +   S+  ++KE W  +     +    +L+GT+ D
Sbjct: 70  REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKE-WYRQARGFNKTAVPILIGTKYD 125


>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 234

 Score = 45.2 bits (102), Expect = 9e-06
 Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
 Frame = +3

Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV---FDNYAVTVMIGGEP--YTLGLFDT 350
           +K V+ G    GK+CLL  +  N++  +   TV   F +  ++V +G +     L ++DT
Sbjct: 10  VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69

Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQI 527
           AGQE +  +    Y      ++ + V +  SFE +   W+ +I      T   +L G++ 
Sbjct: 70  AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL-SSWLSDIRAMAPSTICVVLAGSKS 128

Query: 528 DLRD 539
           DL++
Sbjct: 129 DLQN 132


>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 630

 Score = 33.1 bits (72), Expect = 0.039
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
 Frame = +3

Query: 192 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 371
           C VVG  + GKT LL S+  N   +   P    N   +V        L L +  G+ D D
Sbjct: 424 CFVVGSKSCGKTALLSSFINNN-TNRLTPNTVVN---SVEFQSTQRYLVLSE-IGETDLD 478

Query: 372 RL-RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDL 533
            L  P S    D+  + +   +P+SF  +    +  +    QK P +   T+ DL
Sbjct: 479 ILAEPKSLEACDILCLLYDSSNPNSFSFIAN--LLNLYPDLQKIPCVFAATKADL 531


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 29.5 bits (63), Expect = 0.48
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 153  EETTNCLKMQTIKCVVVGDGAVGKTCLL 236
            E    C+  +   C++VGD A GKTC+L
Sbjct: 1860 ESVITCINKKW-PCILVGDTATGKTCIL 1886


>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1687

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 575  FYFSKFLHCSRIIAQVYLRPNQQ-KRCLLLMMSYFRDPLFLYIFK 444
            FYF + L C   + Q+YL  N +  +C+  + S+  D    YI K
Sbjct: 1111 FYFCEPLECVETLVQIYLENNVECCQCIWDIFSFLSDSEPQYIVK 1155


>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 464

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = +3

Query: 186 IKCVVVGDGAVGKTCLLISY----TTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 353
           I  +VVG+ ++GKT  + S+     TN  P + +   F  +  T+  G + + L + DT 
Sbjct: 119 INLIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMD--FVEHKATLSDGDQKFNLTIVDTP 176

Query: 354 GQED 365
           G  D
Sbjct: 177 GFGD 180


>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 682

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 543 NHRASLFASQPTKTVSSVDDELFQGPTFPLHFQMN*GSQH 424
           NH+ S  + QP  + +SV  ++  GPT      MN  + H
Sbjct: 336 NHQPSYTSEQPMYSTASVPQQISNGPTAVNGLPMNSYTPH 375


>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
           type |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 625

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 129 KKIWCTNCEETTNCLKMQTIK-CVVVGDG 212
           KK+ C +    +NCLK  TI+ C+ +  G
Sbjct: 29  KKLKCDHGRPCSNCLKRSTIQSCIYIDPG 57


>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
           Ran1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 470

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 196 THFIVCIFKQLVVSSQFVHQIFFYYRD 116
           +H I  +F QL+ + +  H +  Y+RD
Sbjct: 117 SHLIKTVFLQLISAVEHCHSVGIYHRD 143


>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 703

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -1

Query: 208 SPTTTHFIVCIFKQLVVSSQFVHQIFFYYRDYLVHSKL 95
           SP  TH +VC    L   S F+    +  R  ++ S L
Sbjct: 254 SPNKTHVVVCSTDDLTAISSFILSSIYKIRKVVIISLL 291


>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 2100

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 405  VFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLV 515
            V L CF  + P SF      W+  I+H       LLV
Sbjct: 1740 VILECFLAIQPRSFPAFTFAWLSLISHSYLLPKVLLV 1776


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,831,219
Number of Sequences: 5004
Number of extensions: 59990
Number of successful extensions: 193
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -