Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0662
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 270 2e-73
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 186 3e-48
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 178 7e-46
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 155 6e-39
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 150 2e-37
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 127 2e-30
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 77 2e-15
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 76 4e-15
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 76 6e-15
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 71 2e-13
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 68 1e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 67 3e-12
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 65 1e-11
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 64 1e-11
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 60 4e-10
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 59 7e-10
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 58 2e-09
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 45 9e-06
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 33 0.039
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.48
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 28 1.1
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 28 1.5
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.4
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 26 6.0
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 26 6.0
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 25 7.9
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 25 7.9
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 270 bits (661), Expect = 2e-73
Identities = 125/154 (81%), Positives = 136/154 (88%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356
M TIKCVVVGDGAVGKTCLLISYTTNKFPS+YVPTVFDNYAVTVMIG EPYTLGLFDTAG
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAG 60
Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLR 536
QEDYDRLRPLSYPQTDVFLVCFSV SP+SFENVKEKW PE+ HH P L+VGTQIDLR
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLR 120
Query: 537 DDSATMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
DD + +KLA+ Q P++ EQGE+LA+EL AVKY
Sbjct: 121 DDPSVQQKLARQHQHPLTHEQGERLARELGAVKY 154
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 616 KSLXLSNMVECSALTQKGLKNVFDXAIL 699
+ L VECSALTQKGLKNVFD AI+
Sbjct: 147 RELGAVKYVECSALTQKGLKNVFDEAIV 174
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 186 bits (453), Expect = 3e-48
Identities = 82/150 (54%), Positives = 109/150 (72%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
K V+VGDGA GKTCLLI ++ FP YVPTVF+NY V + G L L+DTAGQEDY
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDY 67
Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548
DRLRPLSYP + V L+CFSV +P S +NV+EKW+ E+ H P LLVG ++DLR+D
Sbjct: 68 DRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPK 127
Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
T+E+L+K QKP++ E+G+ +A+++ A KY
Sbjct: 128 TIEELSKTSQKPITFEEGQVVAQKIGAYKY 157
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 178 bits (433), Expect = 7e-46
Identities = 80/150 (53%), Positives = 105/150 (70%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
K V+VGDGA GKTCLLI ++ FP YVPTVF+NY V + G L L+DTAGQEDY
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDY 67
Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548
DRLRPLSYP + V L+CF+V SP S +NV+EKW+ E+ H P LLV + DLR+D
Sbjct: 68 DRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPK 127
Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
+E+L+K Q PV+ E+G+ +A+++ A KY
Sbjct: 128 IIEELSKTNQHPVTTEEGQAVAQKIGAYKY 157
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 155 bits (376), Expect = 6e-39
Identities = 74/149 (49%), Positives = 96/149 (64%), Gaps = 2/149 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIG--GEPYTLGLFDTAGQE 362
K VVVGDG GKTCLLI +++ FP YVPTVF+NY + G + L L+DTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDD 542
+YDRLRPLSYP ++V L+CFS+ P+S NV EKW PE+ H +TP +LVG + DLR D
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKELXA 629
E L PV+ +Q + +A + A
Sbjct: 136 RNATEVLRTQGLTPVTYQQAQSVALSMNA 164
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 150 bits (363), Expect = 2e-37
Identities = 72/150 (48%), Positives = 96/150 (64%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
K VVVGDGA GKT LL +T FP+EYVPTVF+NY + G+ L L+DTAGQE+Y
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEY 69
Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548
+RLRP+SY + + LV F++ SP S ENV KW+ EI PF+LVG + DLR D
Sbjct: 70 ERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPV 129
Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
+E++ + Q V +Q E +A+ + A KY
Sbjct: 130 AIEEMRRRNQNFVKSQQAELVAQRIGARKY 159
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 127 bits (306), Expect = 2e-30
Identities = 64/150 (42%), Positives = 89/150 (59%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
K V++GDGA GKT LL +T FP Y PT+F+NY + + G L L+DTAGQE+Y
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548
D+LR LSY T V ++CF+V S S ENV KW+PE++ + +LV + DLR
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADE 134
Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
+KI + E+G AK++ AV+Y
Sbjct: 135 EQVDHSKI----IDYEEGLAAAKKINAVRY 160
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 77.4 bits (182), Expect = 2e-15
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356
++ K VVVGDG VGK+ L I + F EY PT+ D+Y I GE L + DTAG
Sbjct: 6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAG 65
Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDL 533
QE+Y +R + FL+ +++ S SSF+ + + + + T P +LV + DL
Sbjct: 66 QEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 534 RDDSATMEKLAKIKQKPVSLEQGEKLAKEL 623
++ VS +GE+LAK +
Sbjct: 126 E------------AERVVSRAEGEQLAKSM 143
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 76.2 bits (179), Expect = 4e-15
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 362
IK +++GD VGK+CLL+ ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPF-LLVGTQIDLRD 539
+ + Y L+ + V SF+NV+ W + H + + +L+G + D D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDNVR-TWFSNVEQHASENVYKILIGNKCDCED 128
Query: 540 DSATMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
Q+ VS EQG+ LA EL VK+
Sbjct: 129 ------------QRQVSFEQGQALADEL-GVKF 148
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 75.8 bits (178), Expect = 6e-15
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 362
+K V++GD VGKTCL+ + KF EY T+ D V++ + TL L+DTAGQE
Sbjct: 9 LKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQE 68
Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT----PFLLVGTQID 530
+ L Y D ++ ++V + SF++V E W E + + PF++VG QID
Sbjct: 69 RFQSLGMAFYRGADCCVIVYNVNNSKSFDSV-ENWRQEFLYQTSQDECAFPFIIVGNQID 127
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 70.9 bits (166), Expect = 2e-13
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365
K +++GD VGK+CLL+ + + + Y+ T+ ++ + T + G+ L ++DTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQ-QKTPFLLVGTQIDLRDD 542
+ + Y ++ + V SF NVK+ W+ EI + + LLVG + D+ D
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKELXAVKYGRMLSAYPERLKERV 683
+AK +++ E AK+ V+ + + ++KER+
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMS--RQIKERM 173
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 67.7 bits (158), Expect = 1e-12
Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Frame = +3
Query: 174 KMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDT 350
K +K +++G+ VGKT ++ Y KF +Y T+ ++ V++ + TL L+DT
Sbjct: 5 KKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDT 64
Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV---KEKWVPEITHHQQKT-PFLLVG 518
AGQE + L Y D ++ + V + SFE + +++++ + + +T PF+L+G
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLG 124
Query: 519 TQIDLRDDSATMEK 560
++D+ + + K
Sbjct: 125 NKVDVEEQKRMVSK 138
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 66.9 bits (156), Expect = 3e-12
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTA 353
++ K V +G+ +VGKT L+ + ++F + Y T+ D + T+ + L L+DTA
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 354 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQID 530
GQE + L P + V ++ + + + +SF N EKW+ ++ +LVG + D
Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNT-EKWIEDVRAERGDDVIIVLVGNKTD 127
Query: 531 LRDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVK 635
L D ++ + K K + + E AK VK
Sbjct: 128 LADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVK 162
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 64.9 bits (151), Expect = 1e-11
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
+ V+G +VGK+ L + Y N F Y PT+ + ++ + G+ + + DTAGQ++Y
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEY 67
Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HQQKTPFLLVGTQIDLRDDS 545
L +++ +S+ S SSFE VK + H + P ++VG + DL
Sbjct: 68 SILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLH--- 124
Query: 546 ATMEKLAKIKQKPVSLEQGEKLAKE 620
Q+ V+ E+G+ LA E
Sbjct: 125 ---------MQRAVTAEEGKALANE 140
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 64.5 bits (150), Expect = 1e-11
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365
K V++GD VGK+ LL+ +T N+F E T+ +A +++ + ++DTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDL 533
Y + Y L+ + + SSF+NV +W+ E+ H +LVG + DL
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNV-GRWLKELREHADSNIVIMLVGNKTDL 127
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 59.7 bits (138), Expect = 4e-10
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +3
Query: 183 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 359
T K V+VGDG GKT + + T +F +Y+ T+ + + + ++DTAGQ
Sbjct: 9 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQ 68
Query: 360 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 539
E LR Y Q ++ F V S +++NV W ++ + P +L G ++D+++
Sbjct: 69 EKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPH-WWRDLVRVCENIPIVLCGNKVDVKE 127
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 58.8 bits (136), Expect = 7e-10
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT--LGLFDTAGQE 362
K V++GD AVGK+ L++ + ++F T+ + + E + L ++DTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRD 539
Y L P+ Y + +V + + +S E K W+ E+ + L G ++DL
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAK-SWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 540 DSATMEK 560
+ +EK
Sbjct: 135 ERRAVEK 141
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 57.6 bits (133), Expect = 2e-09
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +3
Query: 183 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQ 359
TIK ++GD ++GKT L+++Y F E T+ N+ T+ I T ++D GQ
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 360 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQID 530
++ + P+ L F + S+ ++KE W + + +L+GT+ D
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKE-WYRQARGFNKTAVPILIGTKYD 125
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 45.2 bits (102), Expect = 9e-06
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV---FDNYAVTVMIGGEP--YTLGLFDT 350
+K V+ G GK+CLL + N++ + TV F + ++V +G + L ++DT
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQI 527
AGQE + + Y ++ + V + SFE + W+ +I T +L G++
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL-SSWLSDIRAMAPSTICVVLAGSKS 128
Query: 528 DLRD 539
DL++
Sbjct: 129 DLQN 132
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 33.1 bits (72), Expect = 0.039
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +3
Query: 192 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 371
C VVG + GKT LL S+ N + P N +V L L + G+ D D
Sbjct: 424 CFVVGSKSCGKTALLSSFINNN-TNRLTPNTVVN---SVEFQSTQRYLVLSE-IGETDLD 478
Query: 372 RL-RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDL 533
L P S D+ + + +P+SF + + + QK P + T+ DL
Sbjct: 479 ILAEPKSLEACDILCLLYDSSNPNSFSFIAN--LLNLYPDLQKIPCVFAATKADL 531
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 153 EETTNCLKMQTIKCVVVGDGAVGKTCLL 236
E C+ + C++VGD A GKTC+L
Sbjct: 1860 ESVITCINKKW-PCILVGDTATGKTCIL 1886
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 575 FYFSKFLHCSRIIAQVYLRPNQQ-KRCLLLMMSYFRDPLFLYIFK 444
FYF + L C + Q+YL N + +C+ + S+ D YI K
Sbjct: 1111 FYFCEPLECVETLVQIYLENNVECCQCIWDIFSFLSDSEPQYIVK 1155
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISY----TTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 353
I +VVG+ ++GKT + S+ TN P + + F + T+ G + + L + DT
Sbjct: 119 INLIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMD--FVEHKATLSDGDQKFNLTIVDTP 176
Query: 354 GQED 365
G D
Sbjct: 177 GFGD 180
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 543 NHRASLFASQPTKTVSSVDDELFQGPTFPLHFQMN*GSQH 424
NH+ S + QP + +SV ++ GPT MN + H
Sbjct: 336 NHQPSYTSEQPMYSTASVPQQISNGPTAVNGLPMNSYTPH 375
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 129 KKIWCTNCEETTNCLKMQTIK-CVVVGDG 212
KK+ C + +NCLK TI+ C+ + G
Sbjct: 29 KKLKCDHGRPCSNCLKRSTIQSCIYIDPG 57
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 196 THFIVCIFKQLVVSSQFVHQIFFYYRD 116
+H I +F QL+ + + H + Y+RD
Sbjct: 117 SHLIKTVFLQLISAVEHCHSVGIYHRD 143
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 208 SPTTTHFIVCIFKQLVVSSQFVHQIFFYYRDYLVHSKL 95
SP TH +VC L S F+ + R ++ S L
Sbjct: 254 SPNKTHVVVCSTDDLTAISSFILSSIYKIRKVVIISLL 291
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 405 VFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLV 515
V L CF + P SF W+ I+H LLV
Sbjct: 1740 VILECFLAIQPRSFPAFTFAWLSLISHSYLLPKVLLV 1776
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,831,219
Number of Sequences: 5004
Number of extensions: 59990
Number of successful extensions: 193
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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