Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0662
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 300 8e-82
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 3e-48
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 3e-47
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 173 1e-43
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 5e-32
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 119 2e-27
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 103 1e-22
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 92 3e-19
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 85 7e-17
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 76 2e-14
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 76 3e-14
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 75 7e-14
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 65 6e-11
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 63 2e-10
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 62 3e-10
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 60 1e-09
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 60 2e-09
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 60 2e-09
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 57 1e-08
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 56 2e-08
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 56 2e-08
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 56 3e-08
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 56 4e-08
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 54 1e-07
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 54 1e-07
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 52 6e-07
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 51 8e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 49 4e-06
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 47 2e-05
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 44 1e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 41 8e-04
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 41 0.001
SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 40 0.001
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 40 0.001
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 40 0.003
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 40 0.003
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 40 0.003
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 39 0.004
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 38 0.010
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 36 0.024
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 36 0.042
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.042
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 35 0.055
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 35 0.073
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 35 0.073
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 33 0.17
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 33 0.22
SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059) 32 0.39
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 32 0.51
SB_47852| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 29 2.7
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 29 2.7
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 29 4.8
SB_15987| Best HMM Match : RVT_1 (HMM E-Value=3.7e-27) 28 6.3
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 6.3
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 28 8.4
SB_39224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 300 bits (736), Expect = 8e-82
Identities = 139/154 (90%), Positives = 146/154 (94%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLR 536
QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH KTPFLLVGTQ+DLR
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDLR 120
Query: 537 DDSATMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
DD T+EKL+K KQKP+++E EKLA+EL AVKY
Sbjct: 121 DDQGTIEKLSKNKQKPIAVEAAEKLARELRAVKY 154
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +1
Query: 616 KSLXLSNMVECSALTQKGLKNVFDXAIL 699
+ L VECSALTQKGLKNVFD AIL
Sbjct: 147 RELRAVKYVECSALTQKGLKNVFDEAIL 174
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 188 bits (459), Expect = 3e-48
Identities = 83/151 (54%), Positives = 108/151 (71%)
Frame = +3
Query: 171 LKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 350
+ Q +K VVVGDG VGK+ LI+ TTN FP EY+PTVFDNY+ +M+ G+ Y +GL+DT
Sbjct: 1 MNYQNVKLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDT 60
Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQID 530
AGQEDYDRLRPLSYP TDVFLVCF + S +SFEN++ KW+PE+ HH +TP +LVG + D
Sbjct: 61 AGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKILVGNKRD 120
Query: 531 LRDDSATMEKLAKIKQKPVSLEQGEKLAKEL 623
LR + P++ E+G+ LAK L
Sbjct: 121 LRSAQQNTSLSNHRSRDPITYEEGKALAKRL 151
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 185 bits (451), Expect = 3e-47
Identities = 82/150 (54%), Positives = 106/150 (70%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 5990
Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 548
DRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H P +LVG + DLR D
Sbjct: 5991 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRMDEN 6050
Query: 549 TMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
T +L K+KQ+PV +E+G +A ++ A Y
Sbjct: 6051 TKRELQKMKQEPVKIEEGRAMADKISAYAY 6080
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 173 bits (421), Expect = 1e-43
Identities = 82/167 (49%), Positives = 108/167 (64%)
Frame = +3
Query: 174 KMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 353
K + +KCV+VGDG VGKT LL+SY + FP+ YVPT FD Y VTV + + + DTA
Sbjct: 15 KKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTA 74
Query: 354 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDL 533
GQED+D LRPL Y DVF+VCFSVVSP+SF NV KW+PEI Q K P +LVGT DL
Sbjct: 75 GQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDL 134
Query: 534 RDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVKYGRMLSAYPERLK 674
+D + +L++ +P+S+++ E L K+ V Y S + LK
Sbjct: 135 KDCYKILTELSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLK 181
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 640 VECSALTQKGLKNVFDXAIL 699
VE S++TQK LK VFD AI+
Sbjct: 170 VETSSVTQKNLKTVFDEAII 189
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 134 bits (325), Expect = 5e-32
Identities = 73/166 (43%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Frame = +3
Query: 183 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQ 359
T+K +VGDGAVGKT L I+ TN FP+EY+PT +D + G Y LFD+AG
Sbjct: 6 TLKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGG 65
Query: 360 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 539
ED+DRLRPL YP TD+FLVCF + +SFENV +W+PE+ H P +LVG + DLR
Sbjct: 66 EDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNKKDLR- 124
Query: 540 DSATMEKLAKIKQKPVSLEQGEKLAKELXAVKYGRMLSAYPERLKE 677
E I VS E+G++ A+ ++Y + E +KE
Sbjct: 125 PKQDQEDSHSIDF--VSYEEGKEAAQNF-KMQYIENSALLNENVKE 167
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 119 bits (287), Expect = 2e-27
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 365
I ++VGD GKT LL +Y N+F +Y TVF++ + V + GE L L+DT+G ED
Sbjct: 233 IPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHED 292
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDS 545
YD +RPLSY D+ L+CF + P + +++ EKW+ E+ P LLVG + DLR +
Sbjct: 293 YDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQDLRSEV 352
Query: 546 ATMEKLA-KIKQKPV-SLEQGEKLAKELXAV 632
+ KLA K+ Q+PV SLE +L KE V
Sbjct: 353 NIVSKLASKVCQQPVTSLEVPAEL-KEAFVV 382
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 103 bits (248), Expect = 1e-22
Identities = 48/129 (37%), Positives = 77/129 (59%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 365
+K V+ GD VGKT LI+ T N+ E PT F NY + + +G + + L L+DT G +
Sbjct: 7 LKVVLTGDNNVGKTSFLINLTQNEL--EGTPTAFANYELGLEVGSQKFLLDLWDTEGTTE 64
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDS 545
YDRLRPL+Y +D+ L+CF + + +FE ++ KW+PE T + +L+G + D+R
Sbjct: 65 YDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRVLIGNKNDIRKTR 124
Query: 546 ATMEKLAKI 572
++ K+
Sbjct: 125 QDKDRRGKV 133
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 94.7 bits (225), Expect = 6e-20
Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = +3
Query: 183 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 362
TIK V VGD VGKT L + TT+ FP+ ++ ++FD Y+ T+ I G+ YT+ L DT G
Sbjct: 9 TIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTPGTM 68
Query: 363 DYDRLRPLSYPQ-TDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLR 536
+ R+ P + Q VFL+CF + + SF N++ W+P + P +LVG +++LR
Sbjct: 69 -HPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETSDVPKVLVGNKMELR 126
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 92.3 bits (219), Expect = 3e-19
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Frame = +3
Query: 165 NCLKMQTIKCVVVGDGAVGKTCLLIS-YTTNKFPSEY-------VPTVFDNYAVTVMIGG 320
N + + +K VVGD VGKTC+L + ++ P + +P V +++
Sbjct: 2 NAINTRRLKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDR 61
Query: 321 EPYTLGLFDT---AGQEDYD--RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH 485
Y + +DT A E+ D +LRPL Y TDVF++CF + +P+SF+NV WVPE+ H
Sbjct: 62 VNYIVTYWDTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKH 121
Query: 486 HQQKTPFLLVGTQIDLRDDSATMEKLAKIKQ 578
+ +TP L+VG + D+R ++ + A + +
Sbjct: 122 YMPETPVLVVGNKKDMRTNTRALTAQAPVSR 152
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 89.4 bits (212), Expect = 2e-18
Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 5/148 (3%)
Frame = +3
Query: 180 QTIKCVVVGDGAVGKTCLLIS--YTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 353
+ I+ V++GD VGKTCLL+ Y +N +++ ++ +NY +++ G+ Y L L D
Sbjct: 17 RNIRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCDV- 75
Query: 354 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDL 533
++ D + TDVF +CFSV SF +V+ KW E+ + +P ++VGT+ DL
Sbjct: 76 --DNLDTKISKPFSDTDVFCLCFSVGDMDSFRHVENKWYAEVKNCSPNSPIIVVGTKTDL 133
Query: 534 RDDSATMEKLAKIKQKP---VSLEQGEK 608
R++ ++ K P VS+++G K
Sbjct: 134 RENE-NKKRGKKDDDSPTAIVSVKEGRK 160
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 84.6 bits (200), Expect = 7e-17
Identities = 42/117 (35%), Positives = 65/117 (55%)
Frame = +3
Query: 288 DNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW 467
D+++ +++ + Y + + + Q YD+LR YP TDVFLVCFSV S ++V +W
Sbjct: 102 DSWSGPIIVDNKAYNIEIHECTSQTAYDQLRAELYPDTDVFLVCFSVTLQQSLKDVVNRW 161
Query: 468 VPEITHHQQKTPFLLVGTQIDLRDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
VPE+ TPFLL+GT I+ R S ++P+ E G A++ AV+Y
Sbjct: 162 VPELRRFCPVTPFLLIGTHINWRLLSEDRAATIDPARRPIFPETGAMYAEKHGAVRY 218
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 76.2 bits (179), Expect = 2e-14
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365
K V+ GD AVGK+ ++ N+F S T+ ++ + T+++ G+ Y L L+DTAGQE
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQER 503
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQK-TPFLLVGTQIDLRDD 542
+ + + + D L+ + V +SF +V++ WV I K P +L G +ID+R
Sbjct: 504 FRSIAKSYFRKADGVLLLYDVTCETSFLDVRD-WVEAIEESCSKPVPIMLCGNKIDIRQS 562
Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKELXAV 632
+A K ++ E G +LAKE A+
Sbjct: 563 AAAENKTV------ITAESGSRLAKEHGAL 586
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 75.8 bits (178), Expect = 3e-14
Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 28/181 (15%)
Frame = +3
Query: 180 QTIKCVVVGDGAVGKTCLL------ISYTTNKFPSEYV-----PTVF--DNYAVTV---- 308
+ IKCVVVG+ VGKT L+ + T + +V PTVF D Y V+
Sbjct: 13 ELIKCVVVGNSGVGKTRLICAEALGVGMKTQEANPRHVRHVHYPTVFAIDQYHVSAEIRD 72
Query: 309 ----MIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE 476
I G +L L+DT G D+ R +Y V ++CF++ +PSSF++V W PE
Sbjct: 73 RANFTIDGVSVSLRLWDTFG--DHSMNRRFAYQNAHVIVLCFAINTPSSFKDVNAVWYPE 130
Query: 477 ITHHQQKTPFLLVGTQIDLRDD---SATMEKLAKIKQKP----VSLEQGEKLAKELXAVK 635
I + + P +LVGT+ D R S + + K+ VS + G ++AKE+ AV
Sbjct: 131 IKKYCPRVPIILVGTKSDWRSQLNVSVVCQNTSLSKRMRECFLVSPDMGRQVAKEIDAVY 190
Query: 636 Y 638
Y
Sbjct: 191 Y 191
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 75.8 bits (178), Expect = 3e-14
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
K VVVG G VGK+ L I + + F S+Y PT+ D+Y +I L + DTAGQE++
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEEF 72
Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT--PFLLVGTQIDLRDD 542
+R + FL+ FSV SSFE + K+ +I + +T P ++ G + DL
Sbjct: 73 SAMREQYMRSGEGFLLVFSVTDRSSFEEI-NKFYNQILRVKDRTEFPMIICGNKSDLE-- 129
Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKELXAV 632
++ VS +G++LA++L +
Sbjct: 130 ----------YERTVSTAEGQELARQLREI 149
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 75.8 bits (178), Expect = 3e-14
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Frame = +3
Query: 180 QTIKCVVVGDGAVGKTCLLIS-------------YTTNKFP--SEYVPTVFDNYAVTVMI 314
Q +K V+VGD +GK+ L+ + F +EY PT Y+ V
Sbjct: 4 QALKLVLVGDAGIGKSTLIAKCHETHPTSAECGGFFAKTFDRSAEYKPTALKAYSTNVYS 63
Query: 315 G--GEPYTL---GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI 479
G Y++ + DT G D +RPL+Y D+F++CF V + +SFENV KW PEI
Sbjct: 64 NPTGVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEI 123
Query: 480 THHQQKTPFLLVG 518
+++K P +LVG
Sbjct: 124 RLYEKKVPLMLVG 136
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 74.5 bits (175), Expect = 7e-14
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356
M+ K VV+G G VGK+ L + + T +F +Y PT+ D Y + + P L + DTAG
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAG 60
Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQIDL 533
E + +R L FL+ +S+++ +F ++K + + P +LVG + D+
Sbjct: 61 TEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDI 120
Query: 534 RDDSATMEKLAK 569
D+ AK
Sbjct: 121 YDEREVSTSNAK 132
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365
K ++VGD VGKTCL+ +T FP PT+ ++ + TV + GE L ++DTAGQE
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFL-LVGTQIDLRDD 542
+ + Y D +V + + + SFE++ + W+ + + K + +VG + DL +
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSFESLPQ-WLDDTNRYTSKDVLIAIVGNKSDLSTN 127
Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKEL 623
AK+ K +L + K L
Sbjct: 128 RKVDFHHAKLLLKKKTLLHWRRQLKRL 154
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = +3
Query: 465 WVPEITHHQQKTPFLLVGTQIDLRDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVKY 638
W PE++HH TP +LVGT++DLRDD T++KL + K P+ QG ++AKE+ AVKY
Sbjct: 576 WYPEVSHHCPNTPIVLVGTKLDLRDDKETIDKLKEKKLGPIGYTQGLQMAKEIGAVKY 633
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 616 KSLXLSNMVECSALTQKGLK 675
K + +ECSALTQKGLK
Sbjct: 626 KEIGAVKYLECSALTQKGLK 645
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTA 353
+ T+K ++VG+ VGK+ LL+ +T + F + T+ ++ V T+ + G L ++DTA
Sbjct: 6 LTTLKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTA 65
Query: 354 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPF--LLVGTQI 527
GQE + L P Y ++ + S +F+ + E+W+ E+ + K +LVG +I
Sbjct: 66 GQERFRTLTPSYYRGAQGVILVYDTNSRETFDKL-EEWLNEVEMYSTKKDIVKMLVGNKI 124
Query: 528 DLRDDSATMEKL 563
D S +KL
Sbjct: 125 DKHSSSKCGQKL 136
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 66.9 bits (156), Expect = 1e-11
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Frame = +3
Query: 180 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAG 356
+T K +++GD VGKTCL T KFP T+ D + ++ + GE L L+DTAG
Sbjct: 45 KTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAG 104
Query: 357 QEDYDRLRPLS-YPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQK--TPFLLVGTQI 527
QE + + Y + + + + SFE + W+ E HH P +L+G +
Sbjct: 105 QERFRKSMVCHYYRNVNAVVFMYDITRKCSFEAL-TTWIVEYRHHAYSGDVPKILIGNKC 163
Query: 528 DLRDDSATMEKLAK 569
DL + +A+
Sbjct: 164 DLGLERTVSSNIAR 177
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 66.9 bits (156), Expect = 1e-11
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Frame = +3
Query: 207 DGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQEDYDRLRP 383
DG VGK+ L+ + KF ++ T+ + V + GE YTL ++DTAGQE + LR
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRT 278
Query: 384 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-----QQKTPFLLVGTQIDLRDDSA 548
Y +D+ L+ ++V SF N+ W E ++ Q PF+L+G ++D+ +
Sbjct: 279 PFYRGSDLCLLVYAVDDAKSFTNL-SMWKKEFLYYADVRDQDNFPFILLGNKVDVEGRAV 337
Query: 549 TMEK 560
+ E+
Sbjct: 338 SQEE 341
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 64.9 bits (151), Expect = 6e-11
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = +3
Query: 171 LKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGE-PYTLGLFD 347
L + VV+G G VGKT L+ + + F +Y PTV D Y +V + + L + D
Sbjct: 103 LPAAVFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMD 162
Query: 348 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQ 524
TAG + ++ L+ D F++ +SV +S + E EI + + KT P +LVG +
Sbjct: 163 TAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALE-LQREIVYIKGKTVPMVLVGNK 221
Query: 525 IDLRDDSATMEKLAKIKQ 578
DL + A++++
Sbjct: 222 TDLVSEELRQSTRAQMRK 239
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDLRDD 542
Y + Y ++ + + +F++V E+W+ E+ H T +LVG + DL+
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQDV-ERWLLEVREHADPTIVVMLVGNKCDLKHL 132
Query: 543 SATMEKLAK 569
A AK
Sbjct: 133 RAVASDDAK 141
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 62.5 bits (145), Expect = 3e-10
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +3
Query: 201 VGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQEDYDRL 377
VGDG GKT + + T +F +Y+ T+ + + + P ++DTAGQE + L
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 378 RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 539
R Y Q ++ F V S +++NV W ++ + P +L G ++D++D
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLERVCENIPIVLCGNKVDIKD 150
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 60.5 bits (140), Expect = 1e-09
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Frame = +3
Query: 195 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDR 374
V++G VGK+ LL+ + T +F EY PT+ Y V+ I +P TL + DTA +
Sbjct: 131 VLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTASTYE--- 187
Query: 375 LRPLSYPQTDVFLVCFSVVSPSSFENVKE--KWVPEITHHQQKTPFL-LVGTQIDLRDDS 545
P+ Q + F+V +S+ +FE K+ K + EI + T + L G + DL+
Sbjct: 188 --PVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCR 245
Query: 546 ATMEKLAK 569
A + A+
Sbjct: 246 AVSRQEAR 253
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
K ++G G VGKT LL ++ +KF ++VPTV D + +V + G Y+ + DTAG +
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAGTYAF 73
Query: 369 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKE 461
+R L+ F+V F++ S SSF E
Sbjct: 74 PVMRRLAIHTCQAFIVVFAINSESSFREAFE 104
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/119 (26%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365
K +++GD VGK+ LL+ + + F + Y+ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQ-QKTPFLLVGTQIDLRD 539
+ L Y ++ + V +F ++ + W+ E++ + + +LVG + DL D
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETFLHLSQ-WLEEVSEYACEGVNTILVGNKCDLID 127
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Frame = +3
Query: 180 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAG 356
+ K V +GD VGK+ L + +++ + T+ ++ + M + G+ + L+DTAG
Sbjct: 895 RVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAG 954
Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HQQKTPFLLVGTQIDL 533
QE + + + + D L+ + V + SSF N+K KW+ + ++ +++G + DL
Sbjct: 955 QERFRSITKQYFRKADGILIFYDVTAESSFTNLK-KWMVSVEEGAEEGVAKMVLGNKTDL 1013
Query: 534 RDD 542
+D
Sbjct: 1014 AED 1016
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 58.8 bits (136), Expect = 4e-09
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQED 365
K V +GD VGK+ L + + F +Y PT+ D TV++ L ++DTAGQE
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQ-QKTPFLLVGTQIDLRDD 542
+ L ++ L+ F + + +SFE+V + WV + + +K ++VG ++D D
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGD-WVKMVRDERGEKAVIIIVGNKMDESDR 283
Query: 543 SATMEKLAKIKQKPVSLEQGEKLAKELXAVK 635
+A+ + + L E AK VK
Sbjct: 284 RKVSYDVAEKSAERLGLSYVETSAKSGYNVK 314
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ-ED 365
+ ++GD VGKT LL+ + ++F EY PT+ D Y ++ I TL + DTA + ++
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASRGQN 66
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENV 455
+LR + D F+V +S S+F N+
Sbjct: 67 SCKLRDQFVREGDGFIVVYSTADRSTFANL 96
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Frame = +3
Query: 153 EETTNCLKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPY 329
E NC + K +VVGD VGKT L+ +T F TV + V+ I G+
Sbjct: 3 ENDDNC--KYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRV 60
Query: 330 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPF- 506
L +DTAGQE + + Y D ++ F + + +F ++ + W+ + + K
Sbjct: 61 KLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQ-WLMNVQKYTNKNILK 119
Query: 507 LLVGTQIDLRDDS 545
+LVG + DL+ S
Sbjct: 120 VLVGNKTDLKGAS 132
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQED 365
K +V+GD VGK+ L+ + ++F ++ T+ D + + G+ L L+DTAG+E
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HQQKTPFLLVGTQIDLRDD 542
Y L + D L+ F V SF+++++ W+ E T +LVG + D +D
Sbjct: 72 YRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCDKKDK 131
Query: 543 SATMEKLAKI 572
+ E + +
Sbjct: 132 KVSEEDIQNL 141
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/135 (24%), Positives = 66/135 (48%)
Frame = +3
Query: 129 KKIWCTNCEETTNCLKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV 308
+++ ++ +++ L+ TI V G +VGKT L++ + F +Y PT+ D + V
Sbjct: 12 RELQSSSPKDSETSLRRFTI--VFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHV 69
Query: 309 MIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH 488
E Y L + DT+G ++ +R + + D F++ +S P SF + +
Sbjct: 70 FFNNETYELQIIDTSGTYEFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGG 129
Query: 489 QQKTPFLLVGTQIDL 533
+ + P ++V + DL
Sbjct: 130 KNRHPCIVVCNKNDL 144
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 365
K +++G+ AVGKT L Y + F S +V TV ++ V TV + L ++DTAGQE
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE 461
Y + Y F++ + + + SF+ V++
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEESFQAVQD 114
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 55.6 bits (128), Expect = 4e-08
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV--MIGGEPYTLGLFDTAGQE 362
+ +++GD VGK+ LL +T +F PTV ++ V V + G L ++DTAGQE
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQE 74
Query: 363 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH--HQQKTPFLLVGTQID 530
+ + Y T L+ + + + SF NV + W E + + F+LVG +ID
Sbjct: 75 RFRSITYSYYRNTVGCLIIYDITNRDSFVNVMD-WYKEAKQCVEEAEVVFMLVGHKID 131
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 54.0 bits (124), Expect = 1e-07
Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Frame = +3
Query: 198 VVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRL 377
VVG G VGK+ + I Y N+F T D Y G+ Y + + DTAGQE+Y
Sbjct: 2603 VVGSGGVGKSSVTIRYLKNEF------TEID-YC------GKLYDIEVVDTAGQEEYTSF 2649
Query: 378 RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-----PFLLVG---TQIDL 533
R S D FLV F++ S SS+ +K+ I H++ P ++VG T +++
Sbjct: 2650 RDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTTCTIPMVIVGNKMTGLNV 2709
Query: 534 RDD-SATMEKLAKIKQKPVSLEQ 599
R+ M+++ KI P LE+
Sbjct: 2710 RESFQLMMQQIQKI--NPALLER 2730
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/88 (31%), Positives = 46/88 (52%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 365
+K V++G+ VGK+ L + + T +F EY T+ Y + GE + L DTAG+
Sbjct: 862 VKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGENS 921
Query: 366 YDRLRPLSYPQTDVFLVCFSVVSPSSFE 449
+L +VF+V +S+ S SF+
Sbjct: 922 PAKLE-RCLEIGEVFVVLYSITSRHSFD 948
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Frame = +3
Query: 153 EETTNCLKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI------ 314
EE + K IK + +GD VGKT LL YT + F +VPT+ ++ ++
Sbjct: 96 EEEEDQGKEFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNP 155
Query: 315 GGEPYTLG------LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE 476
GE T G L+DTAGQE + L + FL+ F + SF N++ W+ +
Sbjct: 156 DGERSTRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIR-NWLSQ 214
Query: 477 ITHH 488
+ H
Sbjct: 215 LQTH 218
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Frame = +3
Query: 174 KMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDT 350
K+ K V++G+ AVGK+ L++ + +F T+ + TV + ++DT
Sbjct: 18 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDT 77
Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLV---GT 521
AGQE Y L P+ Y +V + + + +F K WV E+ +Q +P +++ G
Sbjct: 78 AGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK-TWVKEL--QRQASPNIVIALSGN 134
Query: 522 QIDL 533
+ DL
Sbjct: 135 KADL 138
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 51.6 bits (118), Expect = 6e-07
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356
M+ K VV+G G VGK+ L + + T +F +Y PT+ D Y TAG
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY----------------HTAG 44
Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQIDL 533
E + +R L FL+ +S+++ +F ++K + + P +LVG + D+
Sbjct: 45 TEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDI 104
Query: 534 RDD 542
D+
Sbjct: 105 YDE 107
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 51.2 bits (117), Expect = 8e-07
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 258 FPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVS 434
F Y+ T+ ++ + T+ I GE L ++DTAGQE + + Y T +V + V S
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 435 PSSFENVKEKWVPEITHHQQKTPFLLVGTQID 530
+F NVK +W+ EI + +LVG + D
Sbjct: 62 ADTFVNVK-RWLHEIDQNCDDVIRILVGNKDD 92
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 50.8 bits (116), Expect = 1e-06
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTN---------------------KFPSEYVPTVFDNYAV- 302
K +++GD VGK+CLL+ + + + Y+ T+ ++ +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 303 TVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT 482
T+ + G+ L ++DTAGQE + + Y +V + V SF NVK+ W+ EI
Sbjct: 70 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEID 128
Query: 483 HHQ-QKTPFLLVGTQIDLRDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVKYGRMLSA 656
+ + LLVG + DL AK + + + E AK V+ M A
Sbjct: 129 RYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMA 187
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
K V+G +VGK+ L I + +F Y PT+ + + + G+ + L L DTAGQ++Y
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQDEY 67
Query: 369 DRLRPLSY 392
+ P SY
Sbjct: 68 S-IFPQSY 74
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 48.0 bits (109), Expect = 7e-06
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Frame = +3
Query: 180 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT--LGLFDTA 353
+ K +VVGD GK + Y N + Y PT+ ++A+ + + T L ++ A
Sbjct: 17 RNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIA 76
Query: 354 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-----THHQQKTPFLLVG 518
GQE + + + Y D +V F + ++ + KW ++ H ++ P +LVG
Sbjct: 77 GQERFSSMTRVYYKGADACVVLFDLERQTTLDGA-IKWKKDLDSKYKLHSRKPVPCILVG 135
Query: 519 TQIDLRDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVK 635
+ DL D E + K+ ++ L E KE VK
Sbjct: 136 NKSDLPDRPVDKEIIDKLCKEHSFLCWTEMSVKEDINVK 174
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +3
Query: 180 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEY--VPTVFDNYAVTVMIGGEPYTLGLFDTA 353
+ K + G VGKT + +T++FP E + + + V I + + L+DT
Sbjct: 7 EVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTL 66
Query: 354 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE 461
G E+Y+ L Y + V LV +S+ P S VKE
Sbjct: 67 GMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE 102
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Frame = +3
Query: 318 GEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQK 497
G+ Y + + D+AGQE+Y R S D FLV F++ S SS+ +K+ I H++
Sbjct: 20 GKLYDIEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHKES 79
Query: 498 T-----PFLLVG---TQIDLRDD-SATMEKLAKIKQ 578
P ++VG T +++R+ M+++ KI +
Sbjct: 80 NTTCTIPMVIVGNKMTGLNVRESFQLMMQQIQKINR 115
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 359
++ VV+G VGK+ L + + T +F EY T+ + + I E +L + DTAG+
Sbjct: 17 VRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTAGE 74
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 318 GEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQ 494
G+ L ++DTAGQE + + Y ++ + V + SF N+ KW+ +I H +
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI-SKWLKKIDDHANE 60
Query: 495 KTPFLLVGTQIDLRD 539
+LVG + D+ D
Sbjct: 61 DVKRMLVGNKCDMYD 75
>SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3
Query: 360 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEK 464
E+Y+ +R Y TDVFLVCF + +PSS ++V +K
Sbjct: 3 ENYESIRRQMYLDTDVFLVCFDIGNPSSLQSVIDK 37
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF---DNYAVTVMIGGEPYTLGLFDTAGQ 359
K +++G+ VGK+CL+ F ++V + D + + + L + DTAGQ
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQ 411
Query: 360 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP---EITHHQQKTPFLLVGTQID 530
E Y + P + + F + +F + +W+ + +LVG + D
Sbjct: 412 ERYFSILPAYFRGVQGVFLVFDITVEITFLQL-HRWIDLARTTSGADSNIQLILVGNKKD 470
Query: 531 LRDDSATMEKLAK 569
+ D+ A AK
Sbjct: 471 MEDNRAVTYSRAK 483
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +3
Query: 339 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-----THHQQKTP 503
++DTAGQE + L Y D ++ F V P+SF+ + + W E + P
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTL-DSWRDEFLIQASPRDPENFP 59
Query: 504 FLLVGTQIDLRDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVK 635
F+++G +IDL + + + ++ + E AKE V+
Sbjct: 60 FVVLGNKIDLENRAVSAKRAQAWCHSKNDIPYFETSAKEAINVE 103
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 39.5 bits (88), Expect = 0.003
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGG---EPYTLGL--FDT 350
IK V++G+ GKT S E + ++ V V+I EP L + D
Sbjct: 261 IKLVLLGESGAGKT----SCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDGLEVQVVDC 316
Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVS----PSSFENVKEKWVPEITHHQQKTPFLLVG 518
AGQ Y P + + L+ ++ S P SFE W+ +T +K ++V
Sbjct: 317 AGQRRYQLTHPFFLSEEALHLLVINLHSYKKTPESFERNAGDWIKWVTSRLEKPRIMVVL 376
Query: 519 TQID-LRDDSATMEKLAKIKQKPVSLEQGE--KLAKELXAVK 635
T D R+D T +K + I + SLE E +L E+ A+K
Sbjct: 377 THRDECREDEIT-DKCSDILKGIKSLESHEVRRLKMEMEAIK 417
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 306 VMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH 485
+++ + Y ++DTAGQE + L PL Y ++ + + S+F +++ W+ E+
Sbjct: 2 MIVNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLR-PWIRELQR 60
Query: 486 H-QQKTPFLLVGTQIDLRD 539
+ Q + G + D D
Sbjct: 61 YGPQDIVIAVAGNKCDKAD 79
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 198 VVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRL 377
V G VGKT ++ + KF EY PTV D Y+ + G L D++G + +
Sbjct: 13 VFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSGSYQFPAM 72
Query: 378 RPLS 389
R ++
Sbjct: 73 REVA 76
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 180 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 359
+ + V+G VGK+ + T +F EY P + NY ++ I G+ L + DTAG+
Sbjct: 180 RALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTAGK 239
Query: 360 EDYD-RLRPLSYPQT 401
+ R+ P +T
Sbjct: 240 VSREARMSPRQKTKT 254
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 339 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE-KWVPEITHHQQKTPFLLV 515
+ DTAGQE+Y +R + FL F+V + SFE++ + + + ++ P +LV
Sbjct: 281 ILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPMVLV 340
Query: 516 GTQIDL 533
G + DL
Sbjct: 341 GNKCDL 346
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV------MIGGEPYTLG 338
++ ++ VVGD VGKT L+ + S T+ V + M GG+ + L
Sbjct: 4 VEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLE 63
Query: 339 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI 479
+D G +++ R + Y + ++ + + SF N++ KW+ E+
Sbjct: 64 FWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLR-KWLAEV 109
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 37.5 bits (83), Expect = 0.010
Identities = 30/109 (27%), Positives = 52/109 (47%)
Frame = +3
Query: 231 LLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVF 410
L + + T +F EY P + +Y + + G+ + + DTAG+ D++ L V+
Sbjct: 2 LTVRFITRRFIGEYDPCLEASYRHHLTVHGQYIAMDVVDTAGKNTPDKVDALLEAANIVY 61
Query: 411 LVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSATME 557
L+ +SV +SFE + W+ Q K +V T DL+ S +E
Sbjct: 62 LL-YSVTDRASFE--EAAWLAR-RIQQNKA---IVATNKDLKHLSQVLE 103
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 368
K +++GD VGKTC+L ++ + F + ++ T+ +N + + + LF ++
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI-ENVLLNTLAHTLNFERTLFRHGNSGNF 69
Query: 369 DR 374
DR
Sbjct: 70 DR 71
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 35.9 bits (79), Expect = 0.032
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLL--ISYTTNKFPSE--YVPTVFDNYAVTVMIGGEPYTLGLFDTAG 356
K V+VGD VGK+ ++ ++ T+ + Y PT + + L L DT+G
Sbjct: 15 KVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGH--ASYFTASNSCHLYLLDTSG 72
Query: 357 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW 467
E+Y L + D + F++ P S ++ EKW
Sbjct: 73 LEEYRELTKIYLKNLDCVVFTFALNDPHSLSSL-EKW 108
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 195 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT 305
VV+G VGKT L++ + T +F +EY PT+ ++ T
Sbjct: 328 VVLGAAGVGKTALVVRFVTGRFLNEYDPTLGEHARTT 364
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 35.5 bits (78), Expect = 0.042
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 350
K ++G AVGKT L+ + F +E++PT+ D + G Y + L DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDT 350
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 34.7 bits (76), Expect = 0.073
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 14/142 (9%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEY--VPTVFDNYAVTVM------IG-----GEP 326
+K +VVG GKT LL + PS V V D ++V + IG G
Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDEWSVQISTSLLSRIGITSGIGPT 726
Query: 327 YTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCF-SVVSPSSFENVKEKWVPEITHHQQKTP 503
TL +D AGQ Y + + ++L + + + EN++ W+ I +
Sbjct: 727 ITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLR-SWLLNIKARAPYSD 785
Query: 504 FLLVGTQIDLRDDSATMEKLAK 569
+++GT +D R A+ E K
Sbjct: 786 VIIIGTHLD-RIPRASRESRVK 806
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 339 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE 461
L+DT G E+Y+ L Y + V LV +S+ P S VKE
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE 43
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 333 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPF-L 509
L ++DTAGQE + + Y + ++ + + +F+NV +W ++ + + L
Sbjct: 97 LQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNV-IRWGEDVQKYAPENAIKL 155
Query: 510 LVGTQIDL-RDDSATMEKLAKIKQKPVSLEQGEKLAKE 620
LVG + DL R+ ++E L+ E AK+
Sbjct: 156 LVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAKD 193
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 284
++ + V+G+G VGK+ L+ + F EYVPT+
Sbjct: 25 LKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI 60
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 351 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQI 527
AGQE + + Y ++ + + S+ N+ KW+ E+ T+ + +LVG +I
Sbjct: 376 AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNL-HKWLMEVETYASEGVHMILVGNKI 434
Query: 528 DLRDD 542
DL D
Sbjct: 435 DLDTD 439
>SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059)
Length = 141
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 465 WVPEITHHQQKTPFLLVGTQIDLRDDSATMEKLAKIKQKPVSLEQGEKL 611
W PE+ P+LL+G + DLR DSA + +P + + +L
Sbjct: 1 WAPELKEACPGVPYLLIGCKNDLRTDSALELNFLSVPGEPDNADSISRL 49
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTA 353
K V++GD VGK+ LL YT N+F T+ A V I G+ ++DTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +3
Query: 306 VMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH 485
V +GG+ L ++DTAGQE + + Y L+ + + S +F ++ T
Sbjct: 137 VNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTL 196
Query: 486 HQQKTPFLLVGTQIDLRDD 542
+LVG + DL D
Sbjct: 197 ASPNIVIILVGNKKDLDAD 215
>SB_47852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 474 EITHHQQKTPFLLVGTQIDLRDDSATMEKLAKIKQKPVS-LEQGEKLAKELXAVKYGRML 650
++ H K +L + D R + + +P + QG KLA L A+ R++
Sbjct: 41 KLLSHSSKMKMMLTVVRKDNRPQYVRIGSSSSSPMRPSGGIPQGTKLAPMLFAILVNRLV 100
Query: 651 SAYPERLK 674
S +P RLK
Sbjct: 101 SNWPTRLK 108
>SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1720
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 534 RDDSATMEKLAKIKQKPVSLEQGEKLAKELXAVKYG-RML 650
+DD + E + KI KP + +Q KL K L KYG RML
Sbjct: 608 QDDVLSEEDMEKINAKPSTKKQAAKLLKILCRRKYGLRML 647
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 284
K ++VGD VGKT + Y EY PT+
Sbjct: 24 KVLIVGDATVGKTSFVQRYVHGNTRREYKPTI 55
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 177 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 284
+++++ VV+G VGK+ L + T +F EY T+
Sbjct: 14 VRSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTL 49
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 281
+K V+ GD GKTC+ F +Y+PT
Sbjct: 226 MKIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 411 LVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDLR 536
L+ + + ++ENV E+W+ E+ H +LVG + DLR
Sbjct: 10 LLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR 51
>SB_15987| Best HMM Match : RVT_1 (HMM E-Value=3.7e-27)
Length = 745
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 591 LEQGEKLAKELXAVKYGRMLSAYPERLK 674
+ QG KLA L A+ R++S +P RLK
Sbjct: 298 IPQGTKLAPMLFAILVNRLVSNWPTRLK 325
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +3
Query: 186 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 365
IK VVVG+GAVGK+ ++ S GE L L+DTAGQE+
Sbjct: 10 IKVVVVGNGAVGKSSMIQS-----------------------ANGEDIRLMLWDTAGQEE 46
Query: 366 YDRLRPLSY 392
+D + Y
Sbjct: 47 FDAITKAYY 55
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 150 CEETTNCLKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 281
CE C T K V DG+ G C I T + SE P+
Sbjct: 382 CEPVNPCANGGTCKRTVGSDGSAGYNCTCIEGFTGENCSEITPS 425
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 189 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN 293
K +V+GD VGKT L+ Y F Y TV N
Sbjct: 673 KVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFN 707
>SB_39224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -3
Query: 545 RIIAQVYLRPNQQKR---CLLLMMSYFRDPLFLYIFK*TR 435
R+ +VYL+ KR CL+ +M Y RD F + K T+
Sbjct: 169 RVFKRVYLKGKVNKRVDTCLVNLMQYVRDKAFNRMIKMTK 208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,560,022
Number of Sequences: 59808
Number of extensions: 423713
Number of successful extensions: 1084
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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