Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0661
         (351 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B51AF Cluster: PREDICTED: similar to sodium/pot...    33   1.0  

>UniRef50_UPI00015B51AF Cluster: PREDICTED: similar to
           sodium/potassium-dependent atpase beta-2 subunit; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to
           sodium/potassium-dependent atpase beta-2 subunit -
           Nasonia vitripennis
          Length = 327

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 22/83 (26%), Positives = 41/83 (49%)
 Frame = +2

Query: 29  SLIFHQASLRARSEICKG*SKIDTFYLHNMCNRNKMADQNSIPTNADSTRTPVPFYFCCT 208
           SLI++ ++    ++I +  +++D F L N  N++K+ +        D  R P P   C  
Sbjct: 113 SLIYYSSN--NATQIKEWVNRLDMF-LENYLNKSKLPESGRNQVICDYDRPPAPGKVCAV 169

Query: 209 ECIKFGCCHERQTFNCDGFSNRS 277
           +   +G C   Q++   GF+N S
Sbjct: 170 DINSWGPCSAEQSY---GFNNSS 189


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,370,874
Number of Sequences: 1657284
Number of extensions: 5518919
Number of successful extensions: 11289
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 11085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11279
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)