Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0661
         (351 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.52 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   3.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   3.7  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   4.8  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   6.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   6.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   8.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 0.52
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 122  NRNKMADQNSIPTNADSTRTPV-PFYFCCTECI 217
            N +  A+ N+IPTNA +T   +  F + C + +
Sbjct: 1015 NSSVNANTNNIPTNAGTTPGAILAFSWACNDAV 1047


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 84  DLK*TLFIYIICATETKWRIKIRYLP 161
           D+  T+ + +     TK  IK+R++P
Sbjct: 478 DIPETIVLVVDIVLRTKEGIKVRFIP 503


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 84  DLK*TLFIYIICATETKWRIKIRYLP 161
           D+  T+ + +     TK  IK+R++P
Sbjct: 478 DIPETIVLVVDIVLRTKEGIKVRFIP 503


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 252 IVTASVTEVLLAMIINNLMY 311
           +VTA   + L A+ INN+++
Sbjct: 171 LVTAHRVQTLAAIRINNILF 190


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 128 FCCTYYVNKKCL 93
           F C YY  K C+
Sbjct: 231 FSCQYYQGKNCV 242


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 128 FCCTYYVNKKCL 93
           F C YY  K C+
Sbjct: 251 FSCQYYQGKNCV 262


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 290 DNQ*FNVYNKDFY 328
           + Q  +VYN DFY
Sbjct: 2   EGQMVSVYNNDFY 14


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,985
Number of Sequences: 336
Number of extensions: 1700
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)