Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0661
         (351 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    25   0.62 
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   1.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   7.6  

>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 242 GVHGNIQTLYTLCNKNKMAQVSALNQRW*VSNFD 141
           G  G +Q  +T+    +M ++S+   RW   +FD
Sbjct: 220 GRRGPLQAAFTIKELREMLKLSSCTTRWRADDFD 253


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
 Frame = +2

Query: 140 DQNSIPTN--ADSTRTPVPFYFCC 205
           DQ S  +N    +T TP   +FCC
Sbjct: 122 DQESCSSNECVSTTETPTRHFFCC 145


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 233 HERQTFNCDGFSNRSF 280
           HE +  NC+G+S + F
Sbjct: 337 HECKPCNCNGYSTKCF 352


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,828
Number of Sequences: 2352
Number of extensions: 6239
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)