Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0661
         (351 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ252203-1|CAB64656.1|  219|Drosophila melanogaster putative COQ...    29   2.2  
AJ252202-1|CAB64655.1|  219|Drosophila melanogaster putative COQ...    29   2.2  
AE014298-949|AAF46199.2|  219|Drosophila melanogaster CG14437-PA...    29   2.2  
AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA...    28   2.9  
BT028783-1|ABI34164.1|  178|Drosophila melanogaster IP07257p pro...    27   5.1  
AY095177-1|AAM12270.1|  487|Drosophila melanogaster GH12942p pro...    27   5.1  
AE013599-2337|AAF57958.1|  178|Drosophila melanogaster CG5267-PA...    27   5.1  
AE013599-2061|AAF58135.2|  765|Drosophila melanogaster CG8179-PA...    27   5.1  

>AJ252203-1|CAB64656.1|  219|Drosophila melanogaster putative COQ7
           isologue protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +2

Query: 140 DQNSIPTNADSTRTPVPFYFCCTECIKFGC 229
           +Q    T  D      PFY   TE IKFGC
Sbjct: 180 EQEHHDTGIDHGAEQAPFYQAMTEVIKFGC 209


>AJ252202-1|CAB64655.1|  219|Drosophila melanogaster putative COQ7
           isologue protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +2

Query: 140 DQNSIPTNADSTRTPVPFYFCCTECIKFGC 229
           +Q    T  D      PFY   TE IKFGC
Sbjct: 180 EQEHHDTGIDHGAEQAPFYQAMTEVIKFGC 209


>AE014298-949|AAF46199.2|  219|Drosophila melanogaster CG14437-PA
           protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +2

Query: 140 DQNSIPTNADSTRTPVPFYFCCTECIKFGC 229
           +Q    T  D      PFY   TE IKFGC
Sbjct: 180 EQEHHDTGIDHGAEQAPFYQAMTEVIKFGC 209


>AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA
           protein.
          Length = 1010

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 102 FIYIICATETKWRIKIR-YLPTLIQRGHLC 188
           +IY++C T+  +  KIR Y   L QR  LC
Sbjct: 97  YIYLVCITQIIFFFKIRKYAGNLCQRASLC 126


>BT028783-1|ABI34164.1|  178|Drosophila melanogaster IP07257p
           protein.
          Length = 178

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 176 RTPVPFYFCCTECIKFGCCHERQTFNCDG 262
           R P+P      +  KFGCCH      C G
Sbjct: 92  RNPLPEEKYIKQPFKFGCCHNSTYVGCAG 120


>AY095177-1|AAM12270.1|  487|Drosophila melanogaster GH12942p
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +2

Query: 122 NRNKMADQNSIPTNADSTRTPV-PFYFCCTECIKFGCCHERQ 244
           NRN  A        A   RTP  P   CC    +  CCH ++
Sbjct: 330 NRNLSAADWLFEERAGRQRTPAAPTVICCCSAAEDCCCHRQR 371


>AE013599-2337|AAF57958.1|  178|Drosophila melanogaster CG5267-PA
           protein.
          Length = 178

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 176 RTPVPFYFCCTECIKFGCCHERQTFNCDG 262
           R P+P      +  KFGCCH      C G
Sbjct: 92  RNPLPEEKYIKQPFKFGCCHNSTYVGCAG 120


>AE013599-2061|AAF58135.2|  765|Drosophila melanogaster CG8179-PA
           protein.
          Length = 765

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +2

Query: 122 NRNKMADQNSIPTNADSTRTPV-PFYFCCTECIKFGCCHERQ 244
           NRN  A        A   RTP  P   CC    +  CCH ++
Sbjct: 330 NRNLSAADWLFEERAGRQRTPAAPTVICCCSAAEDCCCHRQR 371


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,848,333
Number of Sequences: 53049
Number of extensions: 266928
Number of successful extensions: 972
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)