Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0659
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    31   0.028
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   2.5  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   2.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   5.7  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         23   10.0 
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         23   10.0 
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         23   10.0 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   10.0 

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 31.1 bits (67), Expect = 0.028
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 259 WLPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMA 128
           W P   G +S + G  +E R KL+++ S P    FD R ++T A
Sbjct: 466 WSPVFMGGRSGILGRESENRRKLVTTVSTPV---FDRRNHSTRA 506


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = -2

Query: 293 GQDPARVSIDKMVADNRWYQVIVDR*LHRTQG*IDLLAVWPSRVQVRWPWICHDGW 126
           G+D      D+ V D+  Y++ + +   + QG +++      RV  RW ++C DG+
Sbjct: 750 GRDGCGNRADEQVCDHIGYELKLSK---KAQGSVEV------RVYDRWGYVCDDGF 796


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = -2

Query: 293 GQDPARVSIDKMVADNRWYQVIVDR*LHRTQG*IDLLAVWPSRVQVRWPWICHDGW 126
           G+D      D+ V D+  Y++ + +   + QG +++      RV  RW ++C DG+
Sbjct: 749 GRDGCGNRADEQVCDHIGYELKLSK---KAQGSVEV------RVYDRWGYVCDDGF 795


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 345 SERIPVCSDGHRGQLRTWPG 286
           S+ +PVC  GH   L+ W G
Sbjct: 811 SDEVPVCEPGH---LKLWDG 827


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -2

Query: 500 PALYNTQTHTHFVTRAHHKNTHSHM*RTHNTSTQ 399
           P+LY T +     T+  H + H H  R     +Q
Sbjct: 12  PSLYTTVSEPSASTKHRHHSRHHHRRRRERYRSQ 45


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -2

Query: 500 PALYNTQTHTHFVTRAHHKNTHSHM*RTHNTSTQ 399
           P+LY T +     T+  H + H H  R     +Q
Sbjct: 12  PSLYTTVSEPSASTKHRHHSRHHHRRRRERYRSQ 45


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -2

Query: 500 PALYNTQTHTHFVTRAHHKNTHSHM*RTHNTSTQ 399
           P+LY T +     T+  H + H H  R     +Q
Sbjct: 12  PSLYTTVSEPSASTKHRHHSRHHHRRRRERYRSQ 45


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 302  SCPRCPSLHTGIRSECRSPCSRPKKR*CEILEIVL 406
            +CPRCP +  G+       C R  +   E+L+ VL
Sbjct: 955  ACPRCPGVVEGV-EHVMFECPRFAEVRSELLDGVL 988


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,235
Number of Sequences: 2352
Number of extensions: 15023
Number of successful extensions: 65
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)