BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0658 (700 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF145695-1|AAD38670.1| 719|Drosophila melanogaster BcDNA.LD3382... 57 2e-08 AE014297-3908|AAN14069.1| 719|Drosophila melanogaster CG8384-PD... 57 2e-08 AE014297-3907|AAN14068.1| 719|Drosophila melanogaster CG8384-PC... 57 2e-08 AE014297-3906|AAF56556.1| 719|Drosophila melanogaster CG8384-PB... 57 2e-08 AE014297-3905|AAF56557.1| 719|Drosophila melanogaster CG8384-PA... 57 2e-08 AE014297-3904|AAS65218.1| 730|Drosophila melanogaster CG8384-PE... 57 2e-08 M20571-1|AAA28512.1| 719|Drosophila melanogaster protein ( D.me... 55 8e-08 >AF145695-1|AAD38670.1| 719|Drosophila melanogaster BcDNA.LD33829 protein. Length = 719 Score = 57.2 bits (132), Expect = 2e-08 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%) Frame = +3 Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386 RHP G P P PIKFT+ ++ +RIKEEFNFLQAQYH IKL + +SN Sbjct: 7 RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54 >AE014297-3908|AAN14069.1| 719|Drosophila melanogaster CG8384-PD, isoform D protein. Length = 719 Score = 57.2 bits (132), Expect = 2e-08 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%) Frame = +3 Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386 RHP G P P PIKFT+ ++ +RIKEEFNFLQAQYH IKL + +SN Sbjct: 7 RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54 >AE014297-3907|AAN14068.1| 719|Drosophila melanogaster CG8384-PC, isoform C protein. Length = 719 Score = 57.2 bits (132), Expect = 2e-08 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%) Frame = +3 Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386 RHP G P P PIKFT+ ++ +RIKEEFNFLQAQYH IKL + +SN Sbjct: 7 RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54 >AE014297-3906|AAF56556.1| 719|Drosophila melanogaster CG8384-PB, isoform B protein. Length = 719 Score = 57.2 bits (132), Expect = 2e-08 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%) Frame = +3 Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386 RHP G P P PIKFT+ ++ +RIKEEFNFLQAQYH IKL + +SN Sbjct: 7 RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54 >AE014297-3905|AAF56557.1| 719|Drosophila melanogaster CG8384-PA, isoform A protein. Length = 719 Score = 57.2 bits (132), Expect = 2e-08 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%) Frame = +3 Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386 RHP G P P PIKFT+ ++ +RIKEEFNFLQAQYH IKL + +SN Sbjct: 7 RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54 >AE014297-3904|AAS65218.1| 730|Drosophila melanogaster CG8384-PE, isoform E protein. Length = 730 Score = 57.2 bits (132), Expect = 2e-08 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%) Frame = +3 Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386 RHP G P P PIKFT+ ++ +RIKEEFNFLQAQYH IKL + +SN Sbjct: 7 RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54 >M20571-1|AAA28512.1| 719|Drosophila melanogaster protein ( D.melanogaster enhancerof split mRNA, complete cds. ). Length = 719 Score = 55.2 bits (127), Expect = 8e-08 Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 2/53 (3%) Frame = +3 Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386 RHP G P P PIKFT+ ++ +RIKEEFNFLQA YH IKL + +SN Sbjct: 7 RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAHYHS-----IKLECEKLSN 54 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,232,911 Number of Sequences: 53049 Number of extensions: 537183 Number of successful extensions: 1642 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1591 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1642 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3067209849 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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