Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0658
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145695-1|AAD38670.1|  719|Drosophila melanogaster BcDNA.LD3382...    57   2e-08
AE014297-3908|AAN14069.1|  719|Drosophila melanogaster CG8384-PD...    57   2e-08
AE014297-3907|AAN14068.1|  719|Drosophila melanogaster CG8384-PC...    57   2e-08
AE014297-3906|AAF56556.1|  719|Drosophila melanogaster CG8384-PB...    57   2e-08
AE014297-3905|AAF56557.1|  719|Drosophila melanogaster CG8384-PA...    57   2e-08
AE014297-3904|AAS65218.1|  730|Drosophila melanogaster CG8384-PE...    57   2e-08
M20571-1|AAA28512.1|  719|Drosophila melanogaster protein ( D.me...    55   8e-08

>AF145695-1|AAD38670.1|  719|Drosophila melanogaster BcDNA.LD33829
           protein.
          Length = 719

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = +3

Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386
           RHP  G P P  PIKFT+ ++ +RIKEEFNFLQAQYH      IKL  + +SN
Sbjct: 7   RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54


>AE014297-3908|AAN14069.1|  719|Drosophila melanogaster CG8384-PD,
           isoform D protein.
          Length = 719

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = +3

Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386
           RHP  G P P  PIKFT+ ++ +RIKEEFNFLQAQYH      IKL  + +SN
Sbjct: 7   RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54


>AE014297-3907|AAN14068.1|  719|Drosophila melanogaster CG8384-PC,
           isoform C protein.
          Length = 719

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = +3

Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386
           RHP  G P P  PIKFT+ ++ +RIKEEFNFLQAQYH      IKL  + +SN
Sbjct: 7   RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54


>AE014297-3906|AAF56556.1|  719|Drosophila melanogaster CG8384-PB,
           isoform B protein.
          Length = 719

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = +3

Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386
           RHP  G P P  PIKFT+ ++ +RIKEEFNFLQAQYH      IKL  + +SN
Sbjct: 7   RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54


>AE014297-3905|AAF56557.1|  719|Drosophila melanogaster CG8384-PA,
           isoform A protein.
          Length = 719

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = +3

Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386
           RHP  G P P  PIKFT+ ++ +RIKEEFNFLQAQYH      IKL  + +SN
Sbjct: 7   RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54


>AE014297-3904|AAS65218.1|  730|Drosophila melanogaster CG8384-PE,
           isoform E protein.
          Length = 730

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = +3

Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386
           RHP  G P P  PIKFT+ ++ +RIKEEFNFLQAQYH      IKL  + +SN
Sbjct: 7   RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHS-----IKLECEKLSN 54


>M20571-1|AAA28512.1|  719|Drosophila melanogaster protein (
           D.melanogaster enhancerof split mRNA, complete cds. ).
          Length = 719

 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
 Frame = +3

Query: 234 RHP--GPPQPGQPIKFTVGESCDRIKEEFNFLQAQYHK*VH*YIKLANKSISN 386
           RHP  G P P  PIKFT+ ++ +RIKEEFNFLQA YH      IKL  + +SN
Sbjct: 7   RHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAHYHS-----IKLECEKLSN 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,232,911
Number of Sequences: 53049
Number of extensions: 537183
Number of successful extensions: 1642
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)