Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0657
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   9.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 190 LDKLKAERERGITIDIALWKFETSKYYVTII 282
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 190 LDKLKAERERGITIDIALWKFETSKYYVTII 282
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
 Frame = +3

Query: 564 NPSAVAFVPISGWHGXN-MLEPSTKMP 641
           NP+    + I GW+  N +L P    P
Sbjct: 93  NPNLKTIISIGGWNAGNAILAPIAASP 119


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 297 QRFHQEHDHRNLS 335
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +1

Query: 244 WKFETSKYYVTIIDAPGHRDFIKNMITGTSHADC 345
           W  +T+  Y T  D     + +KN     S+ DC
Sbjct: 18  WSEDTTHKYTTKYDNIDLENVVKNERLLKSYVDC 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,356
Number of Sequences: 336
Number of extensions: 3391
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)