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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0657
         (700 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef...   272   2e-74
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef...   272   3e-74
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef...   272   3e-74
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa...   158   6e-40
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote...   151   7e-38
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E...    89   6e-19
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce...    57   3e-09
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    48   1e-06
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    48   2e-06
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...    42   1e-04
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...    42   1e-04
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    33   0.004
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    33   0.030
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    33   0.052
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||...    30   0.37 
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p...    29   0.48 
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su...    29   0.64 
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    29   0.85 
SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1 |Schiz...    27   2.6  
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom...    27   3.4  
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|...    27   3.4  
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi...    26   6.0  
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb...    25   7.9  

>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
           Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score =  272 bits (668), Expect = 2e-74
 Identities = 126/141 (89%), Positives = 133/141 (94%)
 Frame = +1

Query: 19  RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198
           + K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3   KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62

Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378
           LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTS ADCAVLI+  GTGE
Sbjct: 63  LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGE 122

Query: 379 FEAGISKNGQTREHALLAFTL 441
           FEAGISK+GQTREHALLA+TL
Sbjct: 123 FEAGISKDGQTREHALLAYTL 143



 Score = 60.5 bits (140), Expect = 2e-10
 Identities = 21/36 (58%), Positives = 28/36 (77%)
 Frame = +3

Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXGW 656
           +K G+NP  V FVP+SG+ G NM+EP+T MPW+ GW
Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212



 Score = 46.4 bits (105), Expect = 4e-06
 Identities = 24/42 (57%), Positives = 29/42 (69%)
 Frame = +2

Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568
           GVKQLIV VNKMD+T   + + RFEEI KE S++ KK    P
Sbjct: 144 GVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNP 183


>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
           Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 460

 Score =  272 bits (667), Expect = 3e-74
 Identities = 125/141 (88%), Positives = 133/141 (94%)
 Frame = +1

Query: 19  RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198
           + K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3   KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62

Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378
           LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTS ADCA+LI+  GTGE
Sbjct: 63  LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGE 122

Query: 379 FEAGISKNGQTREHALLAFTL 441
           FEAGISK+GQTREHALLA+TL
Sbjct: 123 FEAGISKDGQTREHALLAYTL 143



 Score = 60.5 bits (140), Expect = 2e-10
 Identities = 21/36 (58%), Positives = 28/36 (77%)
 Frame = +3

Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXGW 656
           +K G+NP  V FVP+SG+ G NM+EP+T MPW+ GW
Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212



 Score = 46.4 bits (105), Expect = 4e-06
 Identities = 24/42 (57%), Positives = 29/42 (69%)
 Frame = +2

Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568
           GVKQLIV VNKMD+T   + + RFEEI KE S++ KK    P
Sbjct: 144 GVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNP 183


>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
           Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score =  272 bits (667), Expect = 3e-74
 Identities = 125/141 (88%), Positives = 133/141 (94%)
 Frame = +1

Query: 19  RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198
           + K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3   KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62

Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378
           LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTS ADCA+LI+  GTGE
Sbjct: 63  LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGE 122

Query: 379 FEAGISKNGQTREHALLAFTL 441
           FEAGISK+GQTREHALLA+TL
Sbjct: 123 FEAGISKDGQTREHALLAYTL 143



 Score = 60.5 bits (140), Expect = 2e-10
 Identities = 21/36 (58%), Positives = 28/36 (77%)
 Frame = +3

Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXGW 656
           +K G+NP  V FVP+SG+ G NM+EP+T MPW+ GW
Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212



 Score = 46.4 bits (105), Expect = 4e-06
 Identities = 24/42 (57%), Positives = 29/42 (69%)
 Frame = +2

Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568
           GVKQLIV VNKMD+T   + + RFEEI KE S++ KK    P
Sbjct: 144 GVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNP 183


>SPCC584.04 |sup35|erf3|translation release factor eRF3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score =  158 bits (384), Expect = 6e-40
 Identities = 71/138 (51%), Positives = 97/138 (70%)
 Frame = +1

Query: 25  KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 204
           K H+NIV IGHVD+GKST  G++++  G +DKRT+EK E+EA+E GK S+  +W LD   
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295

Query: 205 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGEFE 384
            ERE+G T+++    FET     +++DAPGH+ ++ NMI G S AD  VL++ A  GEFE
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 355

Query: 385 AGISKNGQTREHALLAFT 438
           AG  + GQTREHA+LA T
Sbjct: 356 AGFERGGQTREHAVLART 373


>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score =  151 bits (367), Expect = 7e-38
 Identities = 71/135 (52%), Positives = 91/135 (67%)
 Frame = +1

Query: 25  KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 204
           K  +++VV GHVDSGKST  G ++++ G I+ R+++K   EA   GKGSF YAW+LD  +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234

Query: 205 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGEFE 384
            ER RG+T+D+A   FE+ K    I DAPGHRDFI  MI G S AD AVL+V +    FE
Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFE 294

Query: 385 AGISKNGQTREHALL 429
            G  +NGQTREHA L
Sbjct: 295 RGFLENGQTREHAYL 309


>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
           EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 439

 Score = 89.0 bits (211), Expect = 6e-19
 Identities = 56/140 (40%), Positives = 75/140 (53%)
 Frame = +1

Query: 13  WARXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 192
           + R K H+NI  IGHVD GK+T T   I KC                ++G+ SF     +
Sbjct: 47  FVRKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQI 91

Query: 193 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGT 372
           DK   E+ RGITI  A  ++ET+  +   +D PGH D+IKNMITG +  D A+++V A  
Sbjct: 92  DKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATD 151

Query: 373 GEFEAGISKNGQTREHALLA 432
           G+         QTREH LLA
Sbjct: 152 GQMP-------QTREHLLLA 164



 Score = 29.9 bits (64), Expect = 0.37
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSY 544
           GVKQ++V +NK+D  EP   E    E+ + +S Y
Sbjct: 168 GVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY 201


>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 813

 Score = 56.8 bits (131), Expect = 3e-09
 Identities = 37/113 (32%), Positives = 53/113 (46%)
 Frame = +1

Query: 37  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
           N+ +I H+D+GK+T T  ++Y  G         F      +  G      V+D L AER+
Sbjct: 30  NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76

Query: 217 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
           RGITI+ A   F      + +ID PGH DF   +    +  D AV I+    G
Sbjct: 77  RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 48.4 bits (110), Expect = 1e-06
 Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
 Frame = +1

Query: 19  RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198
           R K   NI +  H+DSGK+T T  ++Y  G I         K+  E+ +G       +D 
Sbjct: 55  RLKQIRNIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDF 104

Query: 199 LKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIKNMI 321
           ++ ERE+GITI  A     W+               FE S Y + IID PGH DF   + 
Sbjct: 105 MELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTIEVE 163

Query: 322 TGTSHADCAVLIVXAGTGEFEAGISKNGQTREH 420
                 D AVL++ A +G     I+ + Q R +
Sbjct: 164 RALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
 Frame = +1

Query: 37  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
           N  VI H+D GKST +  ++   G I++              +  F     LDKL+ ER 
Sbjct: 60  NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103

Query: 217 RGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
           RGIT+       ++ +    Y + +ID PGH DF   ++   +  +  +L+V A  G
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160


>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
 Frame = +1

Query: 37  NIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 207
           N+ VI HVD GKST T  L+ K G I   K    +F +  A E  +G    +  +  L A
Sbjct: 21  NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFA 79

Query: 208 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360
           E       D+     + + + V +ID+PGH DF   +       D A+++V
Sbjct: 80  EMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
 Frame = +1

Query: 37  NIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 207
           N+ VI HVD GKST T  L+ K G I   K    +F +  A E  +G    +  +  L A
Sbjct: 21  NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFA 79

Query: 208 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360
           E       D+     + + + V +ID+PGH DF   +       D A+++V
Sbjct: 80  EMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 33.1 bits (72), Expect(2) = 0.004
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = +1

Query: 160 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 333
           GK +   A+    + +    GIT  I  +   F+    ++T +D PGH  F      G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242

Query: 334 HADCAVLIVXAGTG 375
            AD  VL+V    G
Sbjct: 243 IADIVVLVVAGDDG 256



 Score = 22.2 bits (45), Expect(2) = 0.004
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 40  IVVIGHVDSGKST 78
           + ++GHVD GK+T
Sbjct: 174 VTLMGHVDHGKTT 186


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 33.5 bits (73), Expect = 0.030
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
 Frame = +1

Query: 37  NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKA 207
           N  ++ HVD GK+T    L+   G I  +   T+   +    E+ +G      +  K  A
Sbjct: 21  NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSA 74

Query: 208 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
                  I     K     Y + +ID+PGH DF   + + +   D A ++V A  G
Sbjct: 75  ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 32.7 bits (71), Expect = 0.052
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
 Frame = +1

Query: 46  VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 219
           ++GHVD+GK+    +L        +  +++ E     Q++G   F    +  K K   ++
Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541

Query: 220 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360
           G        K + +   + IID PGH  F      GTS  + A+L++
Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVI 580


>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 380

 Score = 29.9 bits (64), Expect = 0.37
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +1

Query: 193 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 315
           +K++A+  E+ + I+I   + E   +++  T+ID PG  DFI N
Sbjct: 60  EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103


>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 704

 Score = 29.5 bits (63), Expect = 0.48
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 230 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 102
           I IP+   A S+ N++ + +D LP  +   S    V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213


>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 29.1 bits (62), Expect = 0.64
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 268 YVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360
           +V+ +D PGH   +  M+ G +  D A+L++
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 139


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
 Frame = +1

Query: 37  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
           + +V GH+  GKS     L+Y               + +   + S +Y    D    ERE
Sbjct: 142 SFIVAGHLHHGKSALLDLLVYYT-----------HPDTKPPKRRSLRYT---DTHYLERE 187

Query: 217 RGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360
           R ++I      +A+   +   +    ID PGH DF+  +    + +D  VL+V
Sbjct: 188 RVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240


>SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 451

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +1

Query: 253 ETSKYYVTIIDAPGHRDFIKNMIT-GTSHADCAVLIVXAGTGEFEAGISKNG 405
           E S   + I   P  +  ++++ T G+ H DC +    A    F AGI  +G
Sbjct: 319 EFSDLILAIKTVPSLQSAMQHINTHGSKHTDCIITSSEAAANRFMAGIDASG 370


>SPCC63.03 |||DNAJ domain protein, DNAJC11
           family|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 642

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 254 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 123
           S F   IS+ +P     FSL+ ++   K  LPI W S  + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446


>SPBC1826.01c |mot1||TATA-binding protein associated factor
            Mot1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1953

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -2

Query: 603  AIQKWARKRQQMGCSXSFXMYEDTSXLISSNLGSLYGGSVESILFTPTMSCL 448
            +I K A++RQ + CS S      T   +   L S+  G +ESI      SCL
Sbjct: 965  SIYKIAKERQDIQCSASIASAMVTYDKLPKKLNSIIKGIMESIK-KEQFSCL 1015


>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
           Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 690

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 220 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 122
           H+H  PL  P+P     +L P P  P   S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166


>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 662

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -1

Query: 199 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 71
           V  +PK I  I++ F  P S  S    C+Y     S D  W T
Sbjct: 31  VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,754,275
Number of Sequences: 5004
Number of extensions: 54446
Number of successful extensions: 185
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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