BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0657 (700 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 272 2e-74 SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 272 3e-74 SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 272 3e-74 SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 158 6e-40 SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 151 7e-38 SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 89 6e-19 SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 57 3e-09 SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 48 1e-06 SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 48 2e-06 SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 42 1e-04 SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 42 1e-04 SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.004 SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 33 0.030 SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 33 0.052 SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.37 SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.48 SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 29 0.64 SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 29 0.85 SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1 |Schiz... 27 2.6 SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 3.4 SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 27 3.4 SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 6.0 SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 7.9 >SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual Length = 460 Score = 272 bits (668), Expect = 2e-74 Identities = 126/141 (89%), Positives = 133/141 (94%) Frame = +1 Query: 19 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198 + K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62 Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378 LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTS ADCAVLI+ GTGE Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGE 122 Query: 379 FEAGISKNGQTREHALLAFTL 441 FEAGISK+GQTREHALLA+TL Sbjct: 123 FEAGISKDGQTREHALLAYTL 143 Score = 60.5 bits (140), Expect = 2e-10 Identities = 21/36 (58%), Positives = 28/36 (77%) Frame = +3 Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXGW 656 +K G+NP V FVP+SG+ G NM+EP+T MPW+ GW Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212 Score = 46.4 bits (105), Expect = 4e-06 Identities = 24/42 (57%), Positives = 29/42 (69%) Frame = +2 Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568 GVKQLIV VNKMD+T + + RFEEI KE S++ KK P Sbjct: 144 GVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNP 183 >SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual Length = 460 Score = 272 bits (667), Expect = 3e-74 Identities = 125/141 (88%), Positives = 133/141 (94%) Frame = +1 Query: 19 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198 + K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62 Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378 LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTS ADCA+LI+ GTGE Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGE 122 Query: 379 FEAGISKNGQTREHALLAFTL 441 FEAGISK+GQTREHALLA+TL Sbjct: 123 FEAGISKDGQTREHALLAYTL 143 Score = 60.5 bits (140), Expect = 2e-10 Identities = 21/36 (58%), Positives = 28/36 (77%) Frame = +3 Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXGW 656 +K G+NP V FVP+SG+ G NM+EP+T MPW+ GW Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212 Score = 46.4 bits (105), Expect = 4e-06 Identities = 24/42 (57%), Positives = 29/42 (69%) Frame = +2 Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568 GVKQLIV VNKMD+T + + RFEEI KE S++ KK P Sbjct: 144 GVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNP 183 >SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 272 bits (667), Expect = 3e-74 Identities = 125/141 (88%), Positives = 133/141 (94%) Frame = +1 Query: 19 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198 + K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62 Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378 LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTS ADCA+LI+ GTGE Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGE 122 Query: 379 FEAGISKNGQTREHALLAFTL 441 FEAGISK+GQTREHALLA+TL Sbjct: 123 FEAGISKDGQTREHALLAYTL 143 Score = 60.5 bits (140), Expect = 2e-10 Identities = 21/36 (58%), Positives = 28/36 (77%) Frame = +3 Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXGW 656 +K G+NP V FVP+SG+ G NM+EP+T MPW+ GW Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212 Score = 46.4 bits (105), Expect = 4e-06 Identities = 24/42 (57%), Positives = 29/42 (69%) Frame = +2 Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568 GVKQLIV VNKMD+T + + RFEEI KE S++ KK P Sbjct: 144 GVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNP 183 >SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 158 bits (384), Expect = 6e-40 Identities = 71/138 (51%), Positives = 97/138 (70%) Frame = +1 Query: 25 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 204 K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295 Query: 205 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGEFE 384 ERE+G T+++ FET +++DAPGH+ ++ NMI G S AD VL++ A GEFE Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 355 Query: 385 AGISKNGQTREHALLAFT 438 AG + GQTREHA+LA T Sbjct: 356 AGFERGGQTREHAVLART 373 >SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 592 Score = 151 bits (367), Expect = 7e-38 Identities = 71/135 (52%), Positives = 91/135 (67%) Frame = +1 Query: 25 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 204 K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234 Query: 205 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGEFE 384 ER RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFE 294 Query: 385 AGISKNGQTREHALL 429 G +NGQTREHA L Sbjct: 295 RGFLENGQTREHAYL 309 >SPBC9B6.04c |tuf1||mitochondrial translation elongation factor EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 439 Score = 89.0 bits (211), Expect = 6e-19 Identities = 56/140 (40%), Positives = 75/140 (53%) Frame = +1 Query: 13 WARXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 192 + R K H+NI IGHVD GK+T T I KC ++G+ SF + Sbjct: 47 FVRKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQI 91 Query: 193 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGT 372 DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG + D A+++V A Sbjct: 92 DKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATD 151 Query: 373 GEFEAGISKNGQTREHALLA 432 G+ QTREH LLA Sbjct: 152 GQMP-------QTREHLLLA 164 Score = 29.9 bits (64), Expect = 0.37 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +2 Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSY 544 GVKQ++V +NK+D EP E E+ + +S Y Sbjct: 168 GVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY 201 >SPBC660.10 |||translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 813 Score = 56.8 bits (131), Expect = 3e-09 Identities = 37/113 (32%), Positives = 53/113 (46%) Frame = +1 Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216 N+ +I H+D+GK+T T ++Y G F + G V+D L AER+ Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76 Query: 217 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375 RGITI+ A F + +ID PGH DF + + D AV I+ G Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129 >SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 770 Score = 48.4 bits (110), Expect = 1e-06 Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 19/153 (12%) Frame = +1 Query: 19 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198 R K NI + H+DSGK+T T ++Y G I K+ E+ +G +D Sbjct: 55 RLKQIRNIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDF 104 Query: 199 LKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIKNMI 321 ++ ERE+GITI A W+ FE S Y + IID PGH DF + Sbjct: 105 MELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTIEVE 163 Query: 322 TGTSHADCAVLIVXAGTGEFEAGISKNGQTREH 420 D AVL++ A +G I+ + Q R + Sbjct: 164 RALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196 >SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 646 Score = 47.6 bits (108), Expect = 2e-06 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 4/117 (3%) Frame = +1 Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216 N VI H+D GKST + ++ G I++ + F LDKL+ ER Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103 Query: 217 RGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375 RGIT+ ++ + Y + +ID PGH DF ++ + + +L+V A G Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160 >SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 842 Score = 41.5 bits (93), Expect = 1e-04 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 3/111 (2%) Frame = +1 Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 207 N+ VI HVD GKST T L+ K G I K +F + A E +G + + L A Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFA 79 Query: 208 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360 E D+ + + + V +ID+PGH DF + D A+++V Sbjct: 80 EMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elongation factor 2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 842 Score = 41.5 bits (93), Expect = 1e-04 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 3/111 (2%) Frame = +1 Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 207 N+ VI HVD GKST T L+ K G I K +F + A E +G + + L A Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFA 79 Query: 208 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360 E D+ + + + V +ID+PGH DF + D A+++V Sbjct: 80 EMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual Length = 686 Score = 33.1 bits (72), Expect(2) = 0.004 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Frame = +1 Query: 160 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 333 GK + A+ + + GIT I + F+ ++T +D PGH F G + Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242 Query: 334 HADCAVLIVXAGTG 375 AD VL+V G Sbjct: 243 IADIVVLVVAGDDG 256 Score = 22.2 bits (45), Expect(2) = 0.004 Identities = 7/13 (53%), Positives = 11/13 (84%) Frame = +1 Query: 40 IVVIGHVDSGKST 78 + ++GHVD GK+T Sbjct: 174 VTLMGHVDHGKTT 186 >SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1000 Score = 33.5 bits (73), Expect = 0.030 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 3/116 (2%) Frame = +1 Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKA 207 N ++ HVD GK+T L+ G I + T+ + E+ +G + K A Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSA 74 Query: 208 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375 I K Y + +ID+PGH DF + + + D A ++V A G Sbjct: 75 ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130 >SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1079 Score = 32.7 bits (71), Expect = 0.052 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%) Frame = +1 Query: 46 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 219 ++GHVD+GK+ +L + +++ E Q++G F + K K ++ Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541 Query: 220 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360 G K + + + IID PGH F GTS + A+L++ Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVI 580 >SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1|||Manual Length = 380 Score = 29.9 bits (64), Expect = 0.37 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Frame = +1 Query: 193 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 315 +K++A+ E+ + I+I + E +++ T+ID PG DFI N Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103 >SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces pombe|chr 1|||Manual Length = 704 Score = 29.5 bits (63), Expect = 0.48 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -3 Query: 230 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 102 I IP+ A S+ N++ + +D LP + S V+L +P H Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213 >SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma subunit|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 29.1 bits (62), Expect = 0.64 Identities = 10/31 (32%), Positives = 19/31 (61%) Frame = +1 Query: 268 YVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360 +V+ +D PGH + M+ G + D A+L++ Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 139 >SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces pombe|chr 2|||Manual Length = 983 Score = 28.7 bits (61), Expect = 0.85 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 5/113 (4%) Frame = +1 Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216 + +V GH+ GKS L+Y + + + S +Y D ERE Sbjct: 142 SFIVAGHLHHGKSALLDLLVYYT-----------HPDTKPPKRRSLRYT---DTHYLERE 187 Query: 217 RGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360 R ++I +A+ + + ID PGH DF+ + + +D VL+V Sbjct: 188 RVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240 >SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 451 Score = 27.1 bits (57), Expect = 2.6 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = +1 Query: 253 ETSKYYVTIIDAPGHRDFIKNMIT-GTSHADCAVLIVXAGTGEFEAGISKNG 405 E S + I P + ++++ T G+ H DC + A F AGI +G Sbjct: 319 EFSDLILAIKTVPSLQSAMQHINTHGSKHTDCIITSSEAAANRFMAGIDASG 370 >SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharomyces pombe|chr 3|||Manual Length = 642 Score = 26.6 bits (56), Expect = 3.4 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -3 Query: 254 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 123 S F IS+ +P FSL+ ++ K LPI W S + S V Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446 >SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1953 Score = 26.6 bits (56), Expect = 3.4 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -2 Query: 603 AIQKWARKRQQMGCSXSFXMYEDTSXLISSNLGSLYGGSVESILFTPTMSCL 448 +I K A++RQ + CS S T + L S+ G +ESI SCL Sbjct: 965 SIYKIAKERQDIQCSASIASAMVTYDKLPKKLNSIIKGIMESIK-KEQFSCL 1015 >SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schizosaccharomyces pombe|chr 1|||Manual Length = 690 Score = 25.8 bits (54), Expect = 6.0 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -1 Query: 220 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 122 H+H PL P+P +L P P P S WY Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166 >SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pombe|chr 2|||Manual Length = 662 Score = 25.4 bits (53), Expect = 7.9 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = -1 Query: 199 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 71 V +PK I I++ F P S S C+Y S D W T Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,754,275 Number of Sequences: 5004 Number of extensions: 54446 Number of successful extensions: 185 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 180 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 323158234 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -