Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0657
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 259 1e-69
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 259 1e-69
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 259 1e-69
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 259 1e-69
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 155 4e-38
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 146 1e-35
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 87 1e-17
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 80 1e-15
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 56 3e-08
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 56 3e-08
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 52 4e-07
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 52 5e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 50 1e-06
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 44 7e-05
At5g13650.2 68418.m01585 elongation factor family protein contai... 40 0.002
At5g13650.1 68418.m01584 elongation factor family protein contai... 40 0.002
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 39 0.003
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 37 0.015
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 37 0.015
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 27 0.42
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 30 1.3
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 30 1.3
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 30 1.3
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 30 1.7
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 30 1.7
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 29 2.2
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 2.2
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 29 2.2
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 3.0
At5g44000.1 68418.m05384 glutathione S-transferase C-terminal do... 29 3.9
At5g35980.1 68418.m04333 protein kinase family protein contains ... 28 5.2
At3g58950.1 68416.m06569 F-box family protein contains F-box dom... 27 9.0
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 259 bits (635), Expect = 1e-69
Identities = 122/141 (86%), Positives = 129/141 (91%)
Frame = +1
Query: 19 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198
+ K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDK
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378
LKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTS ADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 379 FEAGISKNGQTREHALLAFTL 441
FEAGISK+GQTREHALLAFTL
Sbjct: 123 FEAGISKDGQTREHALLAFTL 143
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568
GVKQ+I NKMD+T P Y + R++EI KEVSSY KK P
Sbjct: 144 GVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXG 653
+K GYNP + FVPISG+ G NM+E ST + W+ G
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 259 bits (635), Expect = 1e-69
Identities = 122/141 (86%), Positives = 129/141 (91%)
Frame = +1
Query: 19 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198
+ K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDK
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378
LKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTS ADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 379 FEAGISKNGQTREHALLAFTL 441
FEAGISK+GQTREHALLAFTL
Sbjct: 123 FEAGISKDGQTREHALLAFTL 143
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568
GVKQ+I NKMD+T P Y + R++EI KEVSSY KK P
Sbjct: 144 GVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXG 653
+K GYNP + FVPISG+ G NM+E ST + W+ G
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 259 bits (635), Expect = 1e-69
Identities = 122/141 (86%), Positives = 129/141 (91%)
Frame = +1
Query: 19 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198
+ K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDK
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378
LKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTS ADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 379 FEAGISKNGQTREHALLAFTL 441
FEAGISK+GQTREHALLAFTL
Sbjct: 123 FEAGISKDGQTREHALLAFTL 143
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568
GVKQ+I NKMD+T P Y + R++EI KEVSSY KK P
Sbjct: 144 GVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXG 653
+K GYNP + FVPISG+ G NM+E ST + W+ G
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 259 bits (635), Expect = 1e-69
Identities = 122/141 (86%), Positives = 129/141 (91%)
Frame = +1
Query: 19 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 198
+ K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDK
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 199 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGE 378
LKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTS ADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 379 FEAGISKNGQTREHALLAFTL 441
FEAGISK+GQTREHALLAFTL
Sbjct: 123 FEAGISKDGQTREHALLAFTL 143
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXKKDXLQP 568
GVKQ+I NKMD+T P Y + R++EI KEVSSY KK P
Sbjct: 144 GVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 549 RKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXG 653
+K GYNP + FVPISG+ G NM+E ST + W+ G
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 155 bits (375), Expect = 4e-38
Identities = 66/133 (49%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Frame = +1
Query: 28 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 207
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 208 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGEFEA 387
ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G + AD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 388 GISK-NGQTREHA 423
G GQTREHA
Sbjct: 358 GFDNLKGQTREHA 370
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 146 bits (354), Expect = 1e-35
Identities = 66/142 (46%), Positives = 95/142 (66%)
Frame = +1
Query: 16 ARXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 195
A K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 96 ANKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMD 155
Query: 196 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
+ ER +G T+++ FET TI+DAPGH+ ++ NMI+G S AD VL++ A G
Sbjct: 156 TNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 215
Query: 376 EFEAGISKNGQTREHALLAFTL 441
EFE G + GQTREH LA TL
Sbjct: 216 EFETGYERGGQTREHVQLAKTL 237
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 443 GVKQLIVGVNKMDSTEPPYXEPRFEEIXKEVSSYXK 550
GV +LIV VNKMD + + R++EI +++ + K
Sbjct: 238 GVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLK 273
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 87.0 bits (206), Expect = 1e-17
Identities = 52/141 (36%), Positives = 71/141 (50%)
Frame = +1
Query: 10 KWARXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 189
K+ R K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116
Query: 190 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAG 369
+D ER RGITI+ A ++ET + +D PGH D++KNMITG + D A+L+V
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 370 TGEFEAGISKNGQTREHALLA 432
G QT+EH LLA
Sbjct: 177 DGPMP-------QTKEHILLA 190
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 80.2 bits (189), Expect = 1e-15
Identities = 51/140 (36%), Positives = 70/140 (50%)
Frame = +1
Query: 13 WARXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 192
+ R K H+N+ IGHVD GK+T T + K E GK +
Sbjct: 61 FTRNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEI 105
Query: 193 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGT 372
DK E++RGITI A ++ET+K + +D PGH D++KNMITG + D +L+V
Sbjct: 106 DKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPD 165
Query: 373 GEFEAGISKNGQTREHALLA 432
G QT+EH LLA
Sbjct: 166 GPMP-------QTKEHILLA 178
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 55.6 bits (128), Expect = 3e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 217 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGEFEAGIS 396
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 397 KNGQTREH 420
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 55.6 bits (128), Expect = 3e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 217 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTGEFEAGIS 396
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 397 KNGQTREH 420
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/113 (31%), Positives = 53/113 (46%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
NI ++ HVD GK+T HLI GG + GK F +D L E+
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57
Query: 217 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
R IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/117 (30%), Positives = 56/117 (47%)
Frame = +1
Query: 25 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 204
K + NI ++ H+D+GK+TTT ++Y G K E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYK---------IGEVHEGTATMDW----ME 140
Query: 205 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
E+ERGITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 50.0 bits (114), Expect = 1e-06
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 217 RGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
RGITI + + +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 44.4 bits (100), Expect = 7e-05
Identities = 41/122 (33%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
N +I H+D GKST L+ G I K G G +Y LDKL +RE
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY---LDKL--QRE 109
Query: 217 RGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAG 369
RGIT+ E S Y + +ID PGH DF + S A+L+V A
Sbjct: 110 RGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAA 169
Query: 370 TG 375
G
Sbjct: 170 QG 171
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/113 (29%), Positives = 49/113 (43%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 217 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/113 (29%), Positives = 49/113 (43%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 217 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 181
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 204
N+ VI HVD GKST T L+ G I + + + A E +G + K + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 205 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIV 360
E ++ + ++Y + +ID+PGH DF + D A+++V
Sbjct: 81 MTDE---SLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 36.7 bits (81), Expect = 0.015
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 217 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 36.7 bits (81), Expect = 0.015
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +1
Query: 37 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 216
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 217 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 26.6 bits (56), Expect(2) = 0.42
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Frame = +1
Query: 196 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVX 363
K+ A GIT I +K +D PGH F G D A+++V
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 364 AGTG 375
A G
Sbjct: 585 ADDG 588
Score = 23.8 bits (49), Expect(2) = 0.42
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 40 IVVIGHVDSGKSTTTGHL 93
I ++GHVD GK+T ++
Sbjct: 504 ITIMGHVDHGKTTLLDYI 521
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 256 TSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXA 366
T + +V+ +D PGH + M+ G + D A+L++ A
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 256 TSKYYVTIIDAPGHRDFIKNMITGTSHADCAVLIVXA 366
T + +V+ +D PGH + M+ G + D A+L++ A
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 271 VTIIDAPGHRDFIKNMITGTSHADCAVLIVXAGTG 375
+T +D PGH F + G + D VL+V A G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 268 YVTIIDAPGHRDFIKNMITGTSHADCAVLIVXA 366
+V+ +D PGH + M+ G + D A+LI+ A
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +1
Query: 250 FETSKY----YVTIIDAPGHRDFIKNMITGTSHADCAVLIVXA 366
FE SK +V+ +D PGH + M+ G + D A+L++ A
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 277 IIDAPGHRDFIKNMITGTSHADCAVLIV 360
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 277 IIDAPGHRDFIKNMITGTSHADCAVLIV 360
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 277 IIDAPGHRDFIKNMITGTSHADCAVLIV 360
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 271 VTIIDAPGHRDFIKNMITGTSHADCAVLIV 360
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g44000.1 68418.m05384 glutathione S-transferase C-terminal
domain-containing protein contains Pfam domain PF00043:
Glutathione S-transferase, C-terminal domain
Length = 399
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 680 CFRYGSTCPSXEPRHFG*RLQHVVSVPS 597
CF T PS PRHF R+ H PS
Sbjct: 4 CFAPQLTFPSFSPRHFSPRMSHQSPKPS 31
>At5g35980.1 68418.m04333 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 956
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 504 SPDLRKSXRKYPH--TXRKXGYNPSAVAFVPISGWHGXNMLEPSTKMPWFXG 653
SPD R+ +YPH G +PSA F P+ + P+T + G
Sbjct: 587 SPDARRRVMQYPHGNGPNGLGTSPSAGNFAPLPLGTSPSQFTPNTNNQFLAG 638
>At3g58950.1 68416.m06569 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 320 SQEPLTLIALCSSXLPVPVNSKLVSLRTAK 409
S + L +++LC +PV N KL+S++TA+
Sbjct: 250 SLDTLQVLSLCCKSMPVFNNLKLLSVKTAE 279
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,808,741
Number of Sequences: 28952
Number of extensions: 300677
Number of successful extensions: 904
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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