Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0656
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 23 2.0
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 23 2.0
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 23 2.0
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 23 2.0
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 23 2.0
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 22 4.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 4.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 4.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 6.0
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 21 8.0
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 337 FSDVYPWIIQLLISLKVLQMTFY 269
F+D++ W LLI+ LQ+ Y
Sbjct: 195 FNDIFGWPFLLLITFTSLQIMVY 217
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 337 FSDVYPWIIQLLISLKVLQMTFY 269
F+D++ W LLI+ LQ+ Y
Sbjct: 195 FNDIFGWPFLLLITFTSLQIMVY 217
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 337 FSDVYPWIIQLLISLKVLQMTFY 269
F+D++ W LLI+ LQ+ Y
Sbjct: 515 FNDIFGWPFLLLITFTSLQIMVY 537
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 334 SDVYPWIIQLLISLKVLQMTFY 269
+D++ W I LI+ LQ+ Y
Sbjct: 222 NDIFGWQILFLITYATLQILVY 243
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 69 MMWTRQGIRIMNSNRAKFFKNIQTNRANIGCPCRSH 176
+ W R G + N+ + NIQ A++ CP H
Sbjct: 591 LSWFRYGNGALMINQWENVTNIQCPNADLPCPKDGH 626
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 69 MMWTRQGIRIMNSNRAKFFKNIQTNRANIGCPCRSH 176
+ W R G + N+ + NIQ A++ CP H
Sbjct: 591 LSWFRYGNGALMINQWENVTNIQCPNADLPCPKDGH 626
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +3
Query: 57 NKNNMMWTRQGIRIMNSNRAKFFKNI 134
NK +WTR I +F+K++
Sbjct: 280 NKTKPIWTRNADDISQEEYGEFYKSL 305
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.6
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 154 LDVRVDPMHK-AINKCSVNLSSGRGNISQTVSTE 252
L V P K A + S NLSS + S T STE
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTE 180
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.2 bits (45), Expect = 4.6
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 154 LDVRVDPMHK-AINKCSVNLSSGRGNISQTVSTE 252
L V P K A + S NLSS + S T STE
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTE 180
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.6
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 154 LDVRVDPMHK-AINKCSVNLSSGRGNISQTVSTE 252
L V P K A + S NLSS + S T STE
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTE 180
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.2 bits (45), Expect = 4.6
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 154 LDVRVDPMHK-AINKCSVNLSSGRGNISQTVSTE 252
L V P K A + S NLSS + S T STE
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTE 180
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 4.6
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 154 LDVRVDPMHK-AINKCSVNLSSGRGNISQTVSTE 252
L V P K A + S NLSS + S T STE
Sbjct: 103 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTE 136
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.6
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 154 LDVRVDPMHK-AINKCSVNLSSGRGNISQTVSTE 252
L V P K A + S NLSS + S T STE
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTE 180
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.6
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 154 LDVRVDPMHK-AINKCSVNLSSGRGNISQTVSTE 252
L V P K A + S NLSS + S T STE
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTE 180
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.0
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 154 LDVRVDPMHK-AINKCSVNLSSGRGNISQTVSTE 252
L V P K A + S NLSS + S T STE
Sbjct: 147 LSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTE 180
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 334 SDVYPWIIQLLISLKVLQMTFY 269
+D++ W I LI+ LQ+ Y
Sbjct: 222 NDIFGWQILFLITYATLQILVY 243
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,195
Number of Sequences: 336
Number of extensions: 2900
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -