Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0656
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro... 99 6e-21
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ... 99 6e-21
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P... 99 6e-21
AE014296-2672|AAF49513.1| 597|Drosophila melanogaster CG4950-PA... 31 1.3
BT011031-1|AAR30191.1| 703|Drosophila melanogaster RE45108p pro... 29 8.9
AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p pro... 29 8.9
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ... 29 8.9
AE014296-927|AAF50798.1| 703|Drosophila melanogaster CG4611-PA ... 29 8.9
>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p
protein.
Length = 1412
Score = 99.1 bits (236), Expect = 6e-21
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
Frame = +1
Query: 265 TDRMSSEEL-LEKLIAGLSTDIHQKNRVYKNDLMRVINRVKEMNFSTKKQGXXXXXXXXX 441
T+ + EL L+K I L D+ + R+ + DL V++ ++ +T Q
Sbjct: 51 TNAAAKAELSLDKQIRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGN 110
Query: 442 XXPDETPSARMALVELVWNTLKP-HTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP-- 612
P+E P R ALV+ +W TL + + HYN LL+ Y+ N T F+ ++
Sbjct: 111 LVPEELPEVRTALVQEIWKTLNALNVPMNISHYNALLRVYLENEHGFAPTDFLAEIEAKG 170
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PN TY+ +I GD+ AT +L M+A++LP EN+FNSL
Sbjct: 171 IEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL 216
>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
stability factor protein.
Length = 1412
Score = 99.1 bits (236), Expect = 6e-21
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
Frame = +1
Query: 265 TDRMSSEEL-LEKLIAGLSTDIHQKNRVYKNDLMRVINRVKEMNFSTKKQGXXXXXXXXX 441
T+ + EL L+K I L D+ + R+ + DL V++ ++ +T Q
Sbjct: 51 TNAAAKAELSLDKQIRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGN 110
Query: 442 XXPDETPSARMALVELVWNTLKP-HTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP-- 612
P+E P R ALV+ +W TL + + HYN LL+ Y+ N T F+ ++
Sbjct: 111 LVPEELPEVRTALVQEIWKTLNALNVPMNISHYNALLRVYLENEHGFAPTDFLAEIEAKG 170
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PN TY+ +I GD+ AT +L M+A++LP EN+FNSL
Sbjct: 171 IEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL 216
>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
protein.
Length = 1412
Score = 99.1 bits (236), Expect = 6e-21
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
Frame = +1
Query: 265 TDRMSSEEL-LEKLIAGLSTDIHQKNRVYKNDLMRVINRVKEMNFSTKKQGXXXXXXXXX 441
T+ + EL L+K I L D+ + R+ + DL V++ ++ +T Q
Sbjct: 51 TNAAAKAELSLDKQIRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGN 110
Query: 442 XXPDETPSARMALVELVWNTLKP-HTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP-- 612
P+E P R ALV+ +W TL + + HYN LL+ Y+ N T F+ ++
Sbjct: 111 LVPEELPEVRTALVQEIWKTLNALNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKG 170
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PN TY+ +I GD+ AT +L M+A++LP EN+FNSL
Sbjct: 171 IEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL 216
>AE014296-2672|AAF49513.1| 597|Drosophila melanogaster CG4950-PA
protein.
Length = 597
Score = 31.5 bits (68), Expect = 1.3
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Frame = +1
Query: 115 LSSLKIFKRIGQILDVRVDPMHKAINKCSVNLSSGRGNISQTVST-EFLK--NTDRMSSE 285
L+S++ IG + +R+D + I+ SVN G ISQ T LK + D
Sbjct: 153 LTSIQTSVFIGANVLMRLDLSYNEISSLSVNAFCGLHTISQIYLTGNLLKELHNDIFKDN 212
Query: 286 ELLEKLI--AGLSTDIHQKNRVYKNDLMRVINRVKEMNFSTKKQGXXXXXXXXXXXPDE- 456
E LEK+ L T I + V++N + R+KE+N S + PD
Sbjct: 213 EYLEKVSFEGNLLTSIQPE--VFRN-----MRRIKEVNLSNNR--------LIFIHPDTF 257
Query: 457 TPSARMALVELVWNTLKPHTKFQVDHYNELLQAYIANN 570
+A + + L +N LK FQ+ N + Q ++ NN
Sbjct: 258 ADAASLENLVLSYNELK---NFQLTEKNIVHQLHLDNN 292
>BT011031-1|AAR30191.1| 703|Drosophila melanogaster RE45108p
protein.
Length = 703
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+PN+ Y +I+A GD++ A + M + L + FN L
Sbjct: 255 EPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFL 299
>AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p protein.
Length = 1775
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = +1
Query: 163 RVDPMHKAINKCSVNLSSGRGNISQTVSTEFLKNTDRMSSEELLEKLIAGLSTDIHQKNR 342
RV A S SS IS S L T + +L +KL A L T H K++
Sbjct: 1633 RVSDEPSATASSSAASSSSPSKISSAGSNSELLGTTSAAGSDLKQKL-AELQTVKHSKDK 1691
Query: 343 VYKNDLMRVINRVKEMNFSTKKQG 414
V ++ + + ++ ++ KQG
Sbjct: 1692 VIVDEREQRLQQMLQLQKDMAKQG 1715
>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
protein.
Length = 2779
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = +1
Query: 163 RVDPMHKAINKCSVNLSSGRGNISQTVSTEFLKNTDRMSSEELLEKLIAGLSTDIHQKNR 342
RV A S SS IS S L T + +L +KL A L T H K++
Sbjct: 2637 RVSDEPSATASSSAASSSSPSKISSAGSNSELLGTTSAAGSDLKQKL-AELQTVKHSKDK 2695
Query: 343 VYKNDLMRVINRVKEMNFSTKKQG 414
V ++ + + ++ ++ KQG
Sbjct: 2696 VIVDEREQRLQQMLQLQKDMAKQG 2719
>AE014296-927|AAF50798.1| 703|Drosophila melanogaster CG4611-PA
protein.
Length = 703
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+PN+ Y +I+A GD++ A + M + L + FN L
Sbjct: 255 EPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFL 299
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,844,379
Number of Sequences: 53049
Number of extensions: 476497
Number of successful extensions: 1180
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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