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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0656
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro...    99   6e-21
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ...    99   6e-21
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P...    99   6e-21
AE014296-2672|AAF49513.1|  597|Drosophila melanogaster CG4950-PA...    31   1.3  
BT011031-1|AAR30191.1|  703|Drosophila melanogaster RE45108p pro...    29   8.9  
AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p pro...    29   8.9  
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ...    29   8.9  
AE014296-927|AAF50798.1|  703|Drosophila melanogaster CG4611-PA ...    29   8.9  

>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p
           protein.
          Length = 1412

 Score = 99.1 bits (236), Expect = 6e-21
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
 Frame = +1

Query: 265 TDRMSSEEL-LEKLIAGLSTDIHQKNRVYKNDLMRVINRVKEMNFSTKKQGXXXXXXXXX 441
           T+  +  EL L+K I  L  D+ +  R+ + DL  V++ ++    +T  Q          
Sbjct: 51  TNAAAKAELSLDKQIRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGN 110

Query: 442 XXPDETPSARMALVELVWNTLKP-HTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP-- 612
             P+E P  R ALV+ +W TL   +    + HYN LL+ Y+ N      T F+ ++    
Sbjct: 111 LVPEELPEVRTALVQEIWKTLNALNVPMNISHYNALLRVYLENEHGFAPTDFLAEIEAKG 170

Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
           ++PN  TY+ +I      GD+  AT +L  M+A++LP  EN+FNSL
Sbjct: 171 IEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL 216


>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
           stability factor protein.
          Length = 1412

 Score = 99.1 bits (236), Expect = 6e-21
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
 Frame = +1

Query: 265 TDRMSSEEL-LEKLIAGLSTDIHQKNRVYKNDLMRVINRVKEMNFSTKKQGXXXXXXXXX 441
           T+  +  EL L+K I  L  D+ +  R+ + DL  V++ ++    +T  Q          
Sbjct: 51  TNAAAKAELSLDKQIRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGN 110

Query: 442 XXPDETPSARMALVELVWNTLKP-HTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP-- 612
             P+E P  R ALV+ +W TL   +    + HYN LL+ Y+ N      T F+ ++    
Sbjct: 111 LVPEELPEVRTALVQEIWKTLNALNVPMNISHYNALLRVYLENEHGFAPTDFLAEIEAKG 170

Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
           ++PN  TY+ +I      GD+  AT +L  M+A++LP  EN+FNSL
Sbjct: 171 IEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL 216


>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
           protein.
          Length = 1412

 Score = 99.1 bits (236), Expect = 6e-21
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
 Frame = +1

Query: 265 TDRMSSEEL-LEKLIAGLSTDIHQKNRVYKNDLMRVINRVKEMNFSTKKQGXXXXXXXXX 441
           T+  +  EL L+K I  L  D+ +  R+ + DL  V++ ++    +T  Q          
Sbjct: 51  TNAAAKAELSLDKQIRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGN 110

Query: 442 XXPDETPSARMALVELVWNTLKP-HTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP-- 612
             P+E P  R ALV+ +W TL   +    + HYN LL+ Y+ N      T F+ ++    
Sbjct: 111 LVPEELPEVRTALVQEIWKTLNALNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKG 170

Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
           ++PN  TY+ +I      GD+  AT +L  M+A++LP  EN+FNSL
Sbjct: 171 IEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL 216


>AE014296-2672|AAF49513.1|  597|Drosophila melanogaster CG4950-PA
           protein.
          Length = 597

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
 Frame = +1

Query: 115 LSSLKIFKRIGQILDVRVDPMHKAINKCSVNLSSGRGNISQTVST-EFLK--NTDRMSSE 285
           L+S++    IG  + +R+D  +  I+  SVN   G   ISQ   T   LK  + D     
Sbjct: 153 LTSIQTSVFIGANVLMRLDLSYNEISSLSVNAFCGLHTISQIYLTGNLLKELHNDIFKDN 212

Query: 286 ELLEKLI--AGLSTDIHQKNRVYKNDLMRVINRVKEMNFSTKKQGXXXXXXXXXXXPDE- 456
           E LEK+     L T I  +  V++N     + R+KE+N S  +             PD  
Sbjct: 213 EYLEKVSFEGNLLTSIQPE--VFRN-----MRRIKEVNLSNNR--------LIFIHPDTF 257

Query: 457 TPSARMALVELVWNTLKPHTKFQVDHYNELLQAYIANN 570
             +A +  + L +N LK    FQ+   N + Q ++ NN
Sbjct: 258 ADAASLENLVLSYNELK---NFQLTEKNIVHQLHLDNN 292


>BT011031-1|AAR30191.1|  703|Drosophila melanogaster RE45108p
           protein.
          Length = 703

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +1

Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
           +PN+  Y  +I+A    GD++ A  +   M  + L    + FN L
Sbjct: 255 EPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFL 299


>AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p protein.
          Length = 1775

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 163  RVDPMHKAINKCSVNLSSGRGNISQTVSTEFLKNTDRMSSEELLEKLIAGLSTDIHQKNR 342
            RV     A    S   SS    IS   S   L  T   +  +L +KL A L T  H K++
Sbjct: 1633 RVSDEPSATASSSAASSSSPSKISSAGSNSELLGTTSAAGSDLKQKL-AELQTVKHSKDK 1691

Query: 343  VYKNDLMRVINRVKEMNFSTKKQG 414
            V  ++  + + ++ ++     KQG
Sbjct: 1692 VIVDEREQRLQQMLQLQKDMAKQG 1715


>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
            protein.
          Length = 2779

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 163  RVDPMHKAINKCSVNLSSGRGNISQTVSTEFLKNTDRMSSEELLEKLIAGLSTDIHQKNR 342
            RV     A    S   SS    IS   S   L  T   +  +L +KL A L T  H K++
Sbjct: 2637 RVSDEPSATASSSAASSSSPSKISSAGSNSELLGTTSAAGSDLKQKL-AELQTVKHSKDK 2695

Query: 343  VYKNDLMRVINRVKEMNFSTKKQG 414
            V  ++  + + ++ ++     KQG
Sbjct: 2696 VIVDEREQRLQQMLQLQKDMAKQG 2719


>AE014296-927|AAF50798.1|  703|Drosophila melanogaster CG4611-PA
           protein.
          Length = 703

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +1

Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
           +PN+  Y  +I+A    GD++ A  +   M  + L    + FN L
Sbjct: 255 EPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFL 299


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,844,379
Number of Sequences: 53049
Number of extensions: 476497
Number of successful extensions: 1180
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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