Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0656
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containi... 40 0.001
At2g37230.1 68415.m04568 pentatricopeptide (PPR) repeat-containi... 40 0.002
At1g63330.1 68414.m07159 pentatricopeptide (PPR) repeat-containi... 40 0.002
At1g62590.1 68414.m07061 pentatricopeptide (PPR) repeat-containi... 39 0.004
At5g04810.1 68418.m00503 pentatricopeptide (PPR) repeat-containi... 38 0.009
At4g01400.1 68417.m00180 pentatricopeptide (PPR) repeat-containi... 38 0.009
At1g63150.1 68414.m07137 pentatricopeptide (PPR) repeat-containi... 37 0.012
At1g09900.1 68414.m01114 pentatricopeptide (PPR) repeat-containi... 37 0.012
At2g39230.1 68415.m04818 pentatricopeptide (PPR) repeat-containi... 37 0.016
At1g74900.1 68414.m08683 pentatricopeptide (PPR) repeat-containi... 36 0.022
At1g63400.1 68414.m07170 pentatricopeptide (PPR) repeat-containi... 36 0.022
At1g80880.1 68414.m09490 pentatricopeptide (PPR) repeat-containi... 36 0.029
At1g09820.1 68414.m01104 pentatricopeptide (PPR) repeat-containi... 36 0.029
At5g39710.1 68418.m04808 pentatricopeptide (PPR) repeat-containi... 36 0.038
At4g31850.1 68417.m04525 pentatricopeptide (PPR) repeat-containi... 36 0.038
At2g38420.1 68415.m04719 pentatricopeptide (PPR) repeat-containi... 36 0.038
At3g48250.1 68416.m05266 pentatricopeptide (PPR) repeat-containi... 35 0.050
At1g63130.1 68414.m07134 pentatricopeptide (PPR) repeat-containi... 35 0.050
At1g12300.1 68414.m01422 pentatricopeptide (PPR) repeat-containi... 35 0.050
At2g30780.1 68415.m03753 pentatricopeptide (PPR) repeat-containi... 35 0.066
At3g22470.1 68416.m02840 pentatricopeptide (PPR) repeat-containi... 34 0.088
At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containi... 34 0.088
At1g51965.1 68414.m05859 pentatricopeptide (PPR) repeat-containi... 34 0.088
At1g20300.1 68414.m02534 pentatricopeptide (PPR) repeat-containi... 34 0.088
At1g06710.1 68414.m00713 pentatricopeptide (PPR) repeat-containi... 34 0.088
At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containi... 34 0.12
At3g60040.1 68416.m06705 F-box family protein contains a novel d... 34 0.12
At3g59040.2 68416.m06580 pentatricopeptide (PPR) repeat-containi... 34 0.12
At3g59040.1 68416.m06581 pentatricopeptide (PPR) repeat-containi... 34 0.12
At3g04760.1 68416.m00512 pentatricopeptide (PPR) repeat-containi... 34 0.12
At2g26790.1 68415.m03213 pentatricopeptide (PPR) repeat-containi... 34 0.12
At1g12770.1 68414.m01482 DEAD/DEAH box helicase family protein /... 34 0.12
At3g03580.1 68416.m00361 pentatricopeptide (PPR) repeat-containi... 33 0.15
At2g01740.1 68415.m00103 pentatricopeptide (PPR) repeat-containi... 33 0.15
At1g64580.1 68414.m07320 pentatricopeptide (PPR) repeat-containi... 33 0.15
At1g62670.1 68414.m07073 pentatricopeptide (PPR) repeat-containi... 33 0.15
At5g50280.1 68418.m06226 pentatricopeptide (PPR) repeat-containi... 33 0.20
At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containi... 33 0.20
At3g09650.1 68416.m01144 pentatricopeptide (PPR) repeat-containi... 33 0.20
At1g79490.1 68414.m09264 pentatricopeptide (PPR) repeat-containi... 33 0.20
At4g19440.1 68417.m02860 pentatricopeptide (PPR) repeat-containi... 33 0.27
At4g11690.1 68417.m01867 pentatricopeptide (PPR) repeat-containi... 33 0.27
At3g16710.1 68416.m02134 pentatricopeptide (PPR) repeat-containi... 33 0.27
At1g62910.1 68414.m07103 pentatricopeptide (PPR) repeat-containi... 33 0.27
At1g12700.1 68414.m01473 helicase domain-containing protein / pe... 33 0.27
At5g67570.1 68418.m08520 pentatricopeptide (PPR) repeat-containi... 32 0.35
At5g43820.1 68418.m05358 pentatricopeptide (PPR) repeat-containi... 32 0.35
At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containi... 32 0.35
At4g02820.1 68417.m00382 pentatricopeptide (PPR) repeat-containi... 32 0.35
At2g17525.1 68415.m02027 pentatricopeptide (PPR) repeat-containi... 32 0.35
At1g79080.1 68414.m09220 pentatricopeptide (PPR) repeat-containi... 32 0.35
At1g26460.1 68414.m03227 pentatricopeptide (PPR) repeat-containi... 32 0.35
At1g02420.1 68414.m00189 pentatricopeptide (PPR) repeat-containi... 32 0.35
At5g64320.1 68418.m08079 pentatricopeptide (PPR) repeat-containi... 32 0.47
At4g26680.1 68417.m03844 pentatricopeptide (PPR) repeat-containi... 32 0.47
At2g19280.1 68415.m02250 pentatricopeptide (PPR) repeat-containi... 32 0.47
At1g62680.1 68414.m07074 pentatricopeptide (PPR) repeat-containi... 32 0.47
At1g52640.1 68414.m05944 pentatricopeptide (PPR) repeat-containi... 32 0.47
At5g61990.1 68418.m07780 pentatricopeptide (PPR) repeat-containi... 31 0.62
At5g02860.1 68418.m00229 pentatricopeptide (PPR) repeat-containi... 31 0.62
At1g10270.1 68414.m01157 pentatricopeptide (PPR) repeat-containi... 31 0.62
At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.62
At5g46100.1 68418.m05668 pentatricopeptide (PPR) repeat-containi... 31 0.82
At4g20090.1 68417.m02938 pentatricopeptide (PPR) repeat-containi... 31 0.82
At3g18110.1 68416.m02303 pentatricopeptide (PPR) repeat-containi... 31 0.82
At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containi... 31 0.82
At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containi... 31 1.1
At5g50990.1 68418.m06322 pentatricopeptide (PPR) repeat-containi... 31 1.1
At5g12100.1 68418.m01421 pentatricopeptide (PPR) repeat-containi... 31 1.1
At5g01110.1 68418.m00015 pentatricopeptide (PPR) repeat-containi... 31 1.1
At2g32630.1 68415.m03983 pentatricopeptide (PPR) repeat-containi... 31 1.1
At2g27800.1 68415.m03370 pentatricopeptide (PPR) repeat-containi... 31 1.1
At2g02150.1 68415.m00151 pentatricopeptide (PPR) repeat-containi... 31 1.1
At1g64100.1 68414.m07261 pentatricopeptide (PPR) repeat-containi... 31 1.1
At1g52620.1 68414.m05941 pentatricopeptide (PPR) repeat-containi... 31 1.1
At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containi... 31 1.1
At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containi... 30 1.4
At5g11310.1 68418.m01320 pentatricopeptide (PPR) repeat-containi... 30 1.4
At3g16890.1 68416.m02159 pentatricopeptide (PPR) repeat-containi... 30 1.4
At2g41720.2 68415.m05156 pentatricopeptide (PPR) repeat-containi... 30 1.4
At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containi... 30 1.4
At2g17140.1 68415.m01979 pentatricopeptide (PPR) repeat-containi... 30 1.4
At1g63070.1 68414.m07125 pentatricopeptide (PPR) repeat-containi... 30 1.4
At1g62930.1 68414.m07105 pentatricopeptide (PPR) repeat-containi... 30 1.4
At1g62720.1 68414.m07079 pentatricopeptide (PPR) repeat-containi... 30 1.4
At1g06580.1 68414.m00697 pentatricopeptide (PPR) repeat-containi... 30 1.4
At3g57430.1 68416.m06394 pentatricopeptide (PPR) repeat-containi... 30 1.9
At3g44120.1 68416.m04730 F-box family protein contains Pfam:PF00... 30 1.9
At3g29230.1 68416.m03667 pentatricopeptide (PPR) repeat-containi... 30 1.9
At3g13880.1 68416.m01754 pentatricopeptide (PPR) repeat-containi... 30 1.9
At2g15630.1 68415.m01790 pentatricopeptide (PPR) repeat-containi... 30 1.9
At1g63320.1 68414.m07158 pentatricopeptide (PPR) repeat-containi... 30 1.9
At1g30290.1 68414.m03704 pentatricopeptide (PPR) repeat-containi... 30 1.9
At1g19525.1 68414.m02432 pentatricopeptide (PPR) repeat-containi... 30 1.9
At5g59900.1 68418.m07512 pentatricopeptide (PPR) repeat-containi... 29 2.5
At5g39980.1 68418.m04848 pentatricopeptide (PPR) repeat-containi... 29 2.5
At5g21222.1 68418.m02532 protein kinase family protein contains ... 29 2.5
At3g60050.1 68416.m06706 pentatricopeptide (PPR) repeat-containi... 29 2.5
At2g31400.1 68415.m03837 pentatricopeptide (PPR) repeat-containi... 29 2.5
At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containi... 29 2.5
At2g07140.1 68415.m00816 F-box family protein contains Pfam:PF00... 29 2.5
At1g77360.1 68414.m09009 pentatricopeptide (PPR) repeat-containi... 29 2.5
At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containi... 29 2.5
At1g22960.1 68414.m02869 pentatricopeptide (PPR) repeat-containi... 29 2.5
At5g55840.1 68418.m06958 pentatricopeptide (PPR) repeat-containi... 29 3.3
At5g55740.1 68418.m06948 pentatricopeptide (PPR) repeat-containi... 29 3.3
At5g28460.1 68418.m03456 pentatricopeptide (PPR) repeat-containi... 29 3.3
At5g28370.1 68418.m03445 pentatricopeptide (PPR) repeat-containi... 29 3.3
At4g34830.1 68417.m04942 pentatricopeptide (PPR) repeat-containi... 29 3.3
At3g61520.1 68416.m06890 pentatricopeptide (PPR) repeat-containi... 29 3.3
At3g53700.1 68416.m05931 pentatricopeptide (PPR) repeat-containi... 29 3.3
At3g15590.1 68416.m01975 DNA-binding protein, putative similar t... 29 3.3
At3g15130.1 68416.m01914 pentatricopeptide (PPR) repeat-containi... 29 3.3
At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containi... 29 3.3
At1g74850.1 68414.m08674 pentatricopeptide (PPR) repeat-containi... 29 3.3
At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containi... 29 3.3
At1g19290.1 68414.m02398 pentatricopeptide (PPR) repeat-containi... 29 3.3
At1g07740.1 68414.m00835 pentatricopeptide (PPR) repeat-containi... 29 3.3
At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to cyto... 29 4.4
At4g39620.1 68417.m05600 pentatricopeptide (PPR) repeat-containi... 29 4.4
At3g06920.1 68416.m00821 pentatricopeptide (PPR) repeat-containi... 29 4.4
At1g79540.1 68414.m09272 pentatricopeptide (PPR) repeat-containi... 29 4.4
At1g36160.1 68414.m04495 acetyl-CoA carboxylase 1 (ACC1) nearly ... 29 4.4
At1g11900.1 68414.m01372 pentatricopeptide (PPR) repeat-containi... 29 4.4
At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containi... 29 4.4
At5g46580.1 68418.m05735 pentatricopeptide (PPR) repeat-containi... 28 5.8
At5g43790.1 68418.m05355 pentatricopeptide (PPR) repeat-containi... 28 5.8
At5g38730.1 68418.m04684 pentatricopeptide (PPR) repeat-containi... 28 5.8
At4g24790.1 68417.m03550 expressed protein ; expression supporte... 28 5.8
At3g20150.1 68416.m02554 kinesin motor family protein contains P... 28 5.8
At3g07290.1 68416.m00868 pentatricopeptide (PPR) repeat-containi... 28 5.8
At2g06000.2 68415.m00654 pentatricopeptide (PPR) repeat-containi... 28 5.8
At2g06000.1 68415.m00653 pentatricopeptide (PPR) repeat-containi... 28 5.8
At2g01510.1 68415.m00075 pentatricopeptide (PPR) repeat-containi... 28 5.8
At1g80270.2 68414.m09398 DNA-binding protein, putative similar t... 28 5.8
At1g80270.1 68414.m09397 DNA-binding protein, putative similar t... 28 5.8
At1g53330.1 68414.m06045 pentatricopeptide (PPR) repeat-containi... 28 5.8
At1g15480.1 68414.m01862 DNA-binding protein, putative similar t... 28 5.8
At5g55210.1 68418.m06882 expressed protein similar to unknown pr... 28 7.6
At3g54980.1 68416.m06100 pentatricopeptide (PPR) repeat-containi... 28 7.6
At1g31840.1 68414.m03912 pentatricopeptide (PPR) repeat-containi... 28 7.6
At1g11710.1 68414.m01344 pentatricopeptide (PPR) repeat-containi... 28 7.6
At1g08610.1 68414.m00954 pentatricopeptide (PPR) repeat-containi... 28 7.6
At1g05600.1 68414.m00580 pentatricopeptide (PPR) repeat-containi... 28 7.6
>At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 938
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANN--RTIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N L+ Y + R + T + + PN+ TY IIR L AG + + + LS MK
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 709 AQNLPATENIFNSL 750
++ + + +N+L
Sbjct: 776 SRGMRPDDFTYNAL 789
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 544 LLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
L +A ++ ++T + K V PN+ TY +I G L +A +L M+ QN+
Sbjct: 374 LCKAGDLSSAEFIITQMLEKS--VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 430
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNM 705
PN+ TY ++ L AGDL+ A +++ M
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQM 390
>At2g37230.1 68415.m04568 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 757
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 466 ARMALVELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYE 639
A VE+ N + P V Y +++ Y+A +R +M ++PN TTY
Sbjct: 309 AEKLFVEMKGNKIGP----SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYS 364
Query: 640 LIIRALRXAGDLNQATEVLSNMKAQNL-PATENIFNSL 750
++ L AG + +A +L NM A+++ P +IF L
Sbjct: 365 TLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKL 402
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLS 699
+ YN L + + R ++ + NKM+ V+P TY L++ + L A
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 700 NMKAQNLPATENIFNSL 750
+MK + + + FN++
Sbjct: 280 DMKTRGISPDDATFNTM 296
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 580 VVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPA 726
++ + K + K N +L++ + AGD+ ATEVL M N+PA
Sbjct: 382 ILKNMMAKHIAPKDNSIFLKLLVSQSK-AGDMAAATEVLKAMATLNVPA 429
>At1g63330.1 68414.m07159 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 558
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+ L+ +N+ +++M+ +PN+ TY +++ L GD++ A +L+ M+
Sbjct: 117 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 176
Query: 709 AQNLPATENIFNSL 750
A + A IFN++
Sbjct: 177 AAKIEADVVIFNTI 190
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PN+ TY +I L G + A+++LS+M + + FN+L
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
VKPN+ TY +I L L +A +L MK +N+L
Sbjct: 460 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 505
>At1g62590.1 68414.m07061 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 634
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+ L+ +N+ +++M+ +PN+ TY +++ L GD + A +L+ M+
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 252
Query: 709 AQNLPATENIFNSL 750
A + A IFN++
Sbjct: 253 AAKIEADVVIFNTI 266
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PN+ TY +I L G + A+++LS+M + + FN+L
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
VKPN+ TY +I L L +A +L MK +N+L
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
>At5g04810.1 68418.m00503 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 952
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ + I +M VKP+I TY I A AGD+N+AT+ + M+
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 709 AQNLPATENIFNSL 750
A + + +L
Sbjct: 792 ALGVKPNIKTYTTL 805
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
KP+ T + L+++ GD+++A E M+A+ + T I+ SL
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y +++Q Y + T + ++ + +I TYE +++A +G + A V M
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 709 AQNLPATENIFNSL 750
A+N+P ++N L
Sbjct: 722 ARNIPRNSFVYNIL 735
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 502 LKPHTKFQVDHYNELLQAY--IANNRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDL 675
+K K V YN ++ A+ + N + T + L +P T+ II +GD+
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 676 NQATEVLSNMKAQNLPATENIFNSL 750
++ EV M+ T + FN L
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGL 630
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = +1
Query: 484 ELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRAL 657
+L+ K K + Y + A T I +M L VKPNI TY +I+
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 658 RXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
A +A MKA + + +++ L
Sbjct: 810 ARASLPEKALSCYEEMKAMGIKPDKAVYHCL 840
>At4g01400.1 68417.m00180 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1117
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKML--PVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
YN L+QA+ N+ + KML V P++ +Y+++I+ G +N A E+L +M
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM 251
>At1g63150.1 68414.m07137 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 629
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+ L+ +N+ +++M+ +P++ TY ++ L GD++ A +L+ M+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 709 AQNLPATENIFNSL 750
A + A IFN++
Sbjct: 251 AARIKANVVIFNTI 264
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PN+ TY +I L G + A+ +LSNM + + FN+L
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
>At1g09900.1 68414.m01114 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 598
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
YN ++ Y + +++M V P++ TY I+R+L +G L QA EVL M
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM-SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN LL + + ++ +M+ P+I TY ++ AL G + A E+L+ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 709 AQNLPATENIFNSL 750
++ +N++
Sbjct: 442 SKGCSPVLITYNTV 455
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATEN-IFNSL 750
P++ TY ++I AG++N A VL M T N I SL
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSL 214
>At2g39230.1 68415.m04818 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 867
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN ++ A+ + + ++ML ++PN TY ++I D A +V++ M
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 709 AQNLPATENIFNSL 750
A N A E I+N++
Sbjct: 547 ASNFEANEVIYNTI 560
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 601 KMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
K V PN+ Y +I G+LN+A + M + + + +FN L
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
>At1g74900.1 68414.m08683 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 482
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN ++Q + +M+ +PN+TTY ++IR L AG+ ++ E++ M+
Sbjct: 303 YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRME 362
Query: 709 AQNLPATENIFNSL 750
+ +N +
Sbjct: 363 NEGCEPNFQTYNMM 376
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +1
Query: 517 KFQVDH--YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQA 684
+F VD YN +L + RT + +M+ + PN+TTY +++ AG + A
Sbjct: 190 RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 685 TEVLSNMKAQN 717
E MK ++
Sbjct: 250 WEFFLEMKKRD 260
>At1g63400.1 68414.m07170 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR-repeats Pfam profile:
PF01535
Length = 577
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/74 (21%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+ L+ +N+ +++M+ +PN+ TY +++ L GD++ A +L+ M+
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252
Query: 709 AQNLPATENIFNSL 750
A + A I++++
Sbjct: 253 AAKIEANVVIYSTV 266
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/99 (20%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = +1
Query: 463 SARMALVELVWNTLKPHTKFQVDHYNELLQAYIANNR---TIVVTTFINKMLPVKPNITT 633
+A+M ++V + + P+ + YN LL N + +VV ++ + ++P I T
Sbjct: 453 NAQMVFKQMVSDGVHPN----IMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYT 507
Query: 634 YELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
Y ++I + AG + ++ ++ + + I+N++
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
>At1g80880.1 68414.m09490 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 540
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNS 747
+KP+ TY +IR L AG L+ A VL+ M ++NL T + F++
Sbjct: 360 LKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHA 404
>At1g09820.1 68414.m01104 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 606
Score = 35.9 bits (79), Expect = 0.029
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +1
Query: 451 DETPSARMALVELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP--VKPN 624
D P + E++ +KP+ V YN L+ + + +KM+ V+PN
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPN----VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365
Query: 625 ITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+ TY +I L +A ++ ++K Q T ++N L
Sbjct: 366 LITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +1
Query: 535 YNELLQAYI---ANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLS 699
YN L+ Y N + + +M+ V PN+TT+ ++I +L + +V
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFK 320
Query: 700 NMKAQNLPATENIFNSL 750
M Q++ +NSL
Sbjct: 321 EMLDQDVKPNVISYNSL 337
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 517 KFQVDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELI 645
+ V YN LLQ Y + +N+ML + PN TYE++
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>At5g39710.1 68418.m04808 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 747
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKML---PVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
YN +L A I + R I + K + V PN+ TY ++IR AG+++ A + M
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 706 KAQNLPATENIFNSL 750
+ + +N+L
Sbjct: 232 ETKGCLPNVVTYNTL 246
>At4g31850.1 68417.m04525 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1112
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 607 LPVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
L +KPN+ T+ + IR L AG +N+A E+L M
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 601 KMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
K + +KP + TY ++ L G + +A E+ M + P FN+L
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
>At2g38420.1 68415.m04719 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 444
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 595 INKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFN 744
+NK L +PN+ TY ++I+AL AGDL++A + M+ + + F+
Sbjct: 338 MNK-LGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFD 386
>At3g48250.1 68416.m05266 pentatricopeptide (PPR) repeat-containing
protein vacontains Pfam profile PF01535: PPR repeat
Length = 621
Score = 35.1 bits (77), Expect = 0.050
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 544 LLQAYIANNRTIVVTTFINKMLP---VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQ 714
L+ ++ +N+ + F+ +M+ VKP +TY+L+I L +A ++L MK Q
Sbjct: 481 LIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540
Query: 715 NLPATENIFN 744
N PA F+
Sbjct: 541 NYPAYAEAFD 550
>At1g63130.1 68414.m07134 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 630
Score = 35.1 bits (77), Expect = 0.050
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N L+ +NR +++M+ +P++ TY +++ L GD++ A +L M+
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 709 AQNLPATENIFNSL 750
+ I+N++
Sbjct: 249 QGKIEPGVVIYNTI 262
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PN+ TY +IR L G + A+ +LS+M + + F++L
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
>At1g12300.1 68414.m01422 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 637
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+Q + + V +M+ V PNI TY++++ L G+ +A E+ ++
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 709 AQNLPATENIFN 744
+ I+N
Sbjct: 501 KSKMELDIGIYN 512
>At2g30780.1 68415.m03753 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 452
Score = 34.7 bits (76), Expect = 0.066
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +1
Query: 535 YNELLQAYI-ANNRTIVVTTFIN-KMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ Y+ A N + TF K PV+P+ TY+L++R +G+LN+ E+ +K
Sbjct: 212 YNFLIAGYMTAWNWDKMEATFQEMKRGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEVIK 271
Query: 709 AQ 714
Q
Sbjct: 272 DQ 273
>At3g22470.1 68416.m02840 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repea
Length = 619
Score = 34.3 bits (75), Expect = 0.088
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ + + + +M+ V P++ TY +++ L G+LN+A E+ M+
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 709 AQNLPATENIFN 744
+ I+N
Sbjct: 483 KSRMTLGIGIYN 494
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
VKP++ TY ++I L G L++A + MK + +N L
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
>At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 551
Score = 34.3 bits (75), Expect = 0.088
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLS 699
V YN L+ AY +N V N+M + P+ TY ++I L GDL++A EV
Sbjct: 298 VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSE 357
Query: 700 NMKAQNLPATENIF 741
L + N++
Sbjct: 358 EAIKHKLLSRPNMY 371
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTI-VVTTF--INKMLPVKPNITTYELIIRALRXAGDLNQATEVL 696
V +N LL AY+ + + + TF + + L + P++ TY +I+AL G ++ +
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 697 SNMKAQNLPATENIFNSL 750
++ FN+L
Sbjct: 217 EELEKNGFEPDLISFNTL 234
>At1g51965.1 68414.m05859 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 650
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y+ L++ + R + + +ML +PNI TY +++ L G +A ++ S MK
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609
Query: 709 AQNL 720
Q L
Sbjct: 610 QQGL 613
>At1g20300.1 68414.m02534 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 537
Score = 34.3 bits (75), Expect = 0.088
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 601 KMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
K+ ++PN+ TY ++I AL G +++A +V ++M FN+L
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N L++ ++ RT V N+M L +P+ TY +I A +L A +VL+ M
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI 387
Query: 709 AQNLPATENIFNSL 750
+ + FN++
Sbjct: 388 KKKCEVNASTFNTI 401
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
YN L++ ++ + T +V +M V+PN+ TY L++ G N A ++ M
Sbjct: 433 YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
>At1g06710.1 68414.m00713 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 946
Score = 34.3 bits (75), Expect = 0.088
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y LL + ++R ++ M +PN Y+ +I L G L++A EV + M
Sbjct: 601 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 660
Query: 709 AQNLPATENIFNSL 750
PAT ++SL
Sbjct: 661 EHGFPATLYTYSSL 674
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNM- 705
Y L+ AY+ + ML PNI TY +I AG + +A ++ M
Sbjct: 515 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 574
Query: 706 KAQNLPATENIF 741
++++P + F
Sbjct: 575 GSKDVPDVDMYF 586
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 592 FINKMLPVK--PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
F+N+M PN+ TY ++ L + VL+ M + + IFNSL
Sbjct: 283 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 337
>At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 504
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKML--PVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y L+Q Y + V +M+ V PNI TY +++ L G + +A +L++M+
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 709 AQNLPATENIFN 744
+ A +N
Sbjct: 424 KNGMDADIVTYN 435
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKML--PVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
+N L+ A + R F +M+ + P+I TY L+I L L++A E+ M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN LL N + + M + +I TY +IIR + AG++ A ++ ++
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 709 AQNL 720
Q L
Sbjct: 459 CQGL 462
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN ++ + + +N+M + P++ TY +I L +G + AT ++S M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 709 AQNLPATENIFNSL 750
+ + FN+L
Sbjct: 249 KREIYPDVFTFNAL 262
>At3g60040.1 68416.m06705 F-box family protein contains a novel
domain with similarity to F-box domain;
Length = 838
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +1
Query: 532 HYNELLQAYIANNRTIVVTTFINKMLPVK---PNITTYELIIRALRXAGDLNQATEVLSN 702
HY L+ Y+ + +M VK PN+ TY +IR L AG+ +A +L
Sbjct: 726 HYTTLIDGYVVSGELDKAKEMFREMT-VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 784
Query: 703 MKAQNLPATENIFNSL 750
M+++ ++++L
Sbjct: 785 MESRGCNPNFVVYSTL 800
>At3g59040.2 68416.m06580 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 590
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFIN--KMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y +L AY+ + F K+ +PNI TY +I+ A D+ + EV M+
Sbjct: 394 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 453
Query: 709 AQNLPATENIFNSL 750
+ A + I ++
Sbjct: 454 LSGIKANQTILTTI 467
>At3g59040.1 68416.m06581 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 583
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFIN--KMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y +L AY+ + F K+ +PNI TY +I+ A D+ + EV M+
Sbjct: 387 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 446
Query: 709 AQNLPATENIFNSL 750
+ A + I ++
Sbjct: 447 LSGIKANQTILTTI 460
>At3g04760.1 68416.m00512 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 602
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 484 ELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLPVK--PNITTYELIIRAL 657
E+V N + V YN LL+A + + + KM K PN+ TY ++I L
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 658 RXAGDLNQATEVLSNMKAQNL 720
G + +A +L MK + L
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGL 364
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 532 HYNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLSNM 705
+YN +L N + K+ V PN ++Y + AL +GD +A ++ M
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 706 KAQNLPATENIFNSL 750
+ + E +NS+
Sbjct: 465 MSNGIDPDEITYNSM 479
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y L++A + +++ML +KP++ TY IIR + G +++A E++ N++
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290
>At2g26790.1 68415.m03213 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 799
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLS 699
V +Y L+ Y + + I++M+ + P++ TY +++ L G + E+
Sbjct: 423 VINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 700 NMKAQNLPATENIFNSL 750
MKA+ P + NS+
Sbjct: 483 RMKAEG-PKPNAVTNSV 498
>At1g12770.1 68414.m01482 DEAD/DEAH box helicase family protein /
pentatricopeptide (PPR) repeat-containing protein
contains Pfam profiles: PF00271 helicase conserved
C-terminal domain, PF01535 PPR repeat, PF00270: DEAD/DEAH
box helicase
Length = 1145
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+Q + + + V +M+ V+P+I +Y++++ L G+L +A E+ ++
Sbjct: 942 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 1001
Query: 709 AQNLPATENIF 741
+ I+
Sbjct: 1002 KSKMELDIGIY 1012
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPA 726
P+ TY ++IRA D A E++ MK+ PA
Sbjct: 1077 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 1112
>At3g03580.1 68416.m00361 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 882
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 502 LKPHTKFQ--VDHYNELLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDL 675
+K H K ++HY ++ + + FI M P+KP+ + + ++RA R +GD+
Sbjct: 636 MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM-PIKPDASIWASVLRACRTSGDM 694
Query: 676 NQATEV 693
A V
Sbjct: 695 ETAERV 700
>At2g01740.1 68415.m00103 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 559
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y ++ + + F+ KML ++ +IT Y +II L G L +ATE++ +M+
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330
Query: 709 AQNLPATENIFNSL 750
+L IF ++
Sbjct: 331 KSDLVPDMVIFTTM 344
>At1g64580.1 68414.m07320 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 1052
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+PN+ Y +I L G+LN A E+L+ M+ + L A +N+L
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 544 LLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQN 717
LL + NR + ++ M PN+ Y +I L DLN A EV M+ +
Sbjct: 684 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 743
Query: 718 LPATENIFNSL 750
+ A +N+L
Sbjct: 744 IRADAVTYNTL 754
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ Y + V N+M+ V P+I TY +++ L G + +A ++ +++
Sbjct: 891 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 950
Query: 709 AQNL 720
+
Sbjct: 951 KSEM 954
>At1g62670.1 68414.m07073 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR repeats Pfam Profile:
PF01535
Length = 630
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N L+ +N+ I++M+ +P++ TY +++ L GD + A +L+ M+
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 709 AQNLPATENIFNSL 750
L I+N++
Sbjct: 249 QGKLEPGVLIYNTI 262
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 622 NITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
N TY ++I+ L AGD + A E+ M + +P +N+L
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
>At5g50280.1 68418.m06226 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 723
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+KP++ TY ++ A R +GD + E+ M + + T +N+L
Sbjct: 516 IKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
>At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein contains CBS and
PPR domain repeats
Length = 580
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPVK--PNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L++ Y+ + +++ML ++ P+ TY +I A GDL+ A + ++MK
Sbjct: 193 YNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMK 252
>At3g09650.1 68416.m01144 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 778
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPVK-----PNITTYELIIRALRXAGDLNQATEVLS 699
Y L++ Y+ N R + M P+ TY ++ A AG +++A +VL+
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 700 NMKAQNLPATENIFNSL 750
M +PA +N L
Sbjct: 477 EMARMGVPANRITYNVL 493
>At1g79490.1 68414.m09264 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 836
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 628 TTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+TYELII +L +G L+ A ++ MK + L + ++F+SL
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSL 354
>At4g19440.1 68417.m02860 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 825
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y+ ++ RT F ++M+ V+PN Y +IRA +G L+ A E+ +MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 709 AQNLPATENIFNSL 750
+ + + SL
Sbjct: 673 HKGISPNSATYTSL 686
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++P + TY ++++ L A + A VL M + P ++N+L
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L++AY + R + M + PN TY +I+ + + +A + M+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 709 AQNLPATENIFN 744
+ L N+F+
Sbjct: 708 MEGL--EPNVFH 717
>At4g11690.1 68417.m01867 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 566
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 607 LPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
L + P++ TY ++I G +N+A+ + +M +N E I+N++
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
V NI TY +I L LN+A +V+ MK+ + +N+L
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
>At3g16710.1 68416.m02134 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 434
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+ LL Y NR +++L + KPN+ TY +IR L LN A E+ + M
Sbjct: 83 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 142
Query: 709 AQNLPATENIFNSL 750
+N+L
Sbjct: 143 TNGSRPNVVTYNAL 156
>At1g62910.1 68414.m07103 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1133
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/74 (20%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+ L+ +N+ +++M+ +P++ TY ++ L GD++ A +L M+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 709 AQNLPATENIFNSL 750
+ A I+N++
Sbjct: 251 KGKIEADVVIYNTI 264
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 535 YNELLQAYIANNR---TIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
YN LL N + +VV ++ + ++P+I TY ++I + AG + E+ N+
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 706 KAQNLPATENIFNSL 750
+ + +N++
Sbjct: 530 SLKGVSPNVIAYNTM 544
>At1g12700.1 68414.m01473 helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein
contains Pfam profiles PF01535: PPR repeat, PF00271:
Helicase conserved C-terminal domain
Length = 828
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N L++ + +++M+ +P++ TY I+ + +GD + A ++L M+
Sbjct: 151 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 210
Query: 709 AQNLPA 726
+N+ A
Sbjct: 211 ERNVKA 216
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN ++ + T + + KM VK ++ TY II +L G ++ A + M+
Sbjct: 186 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 245
Query: 709 AQNLPATENIFNSL 750
+ + ++ +NSL
Sbjct: 246 TKGIKSSVVTYNSL 259
>At5g67570.1 68418.m08520 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 611
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 481 VELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRA 654
VEL N L+P+ Y ++ + + + V F KM P TY++++RA
Sbjct: 365 VELRKNGLRPNGAT----YGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRA 420
Query: 655 LRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
L G + +A E + +M+ + + T +++ L
Sbjct: 421 LWREGKIEEAVEAVRDMEQKGVIGTGSVYYEL 452
>At5g43820.1 68418.m05358 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 680
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/97 (18%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +1
Query: 466 ARMALVELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYE 639
+ ++ + V+N K + F YN ++ + + + +M+ P+ +Y
Sbjct: 235 SHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYS 294
Query: 640 LIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+I L G +N + E+ N+K + N++N++
Sbjct: 295 HLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
>At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 634
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
K N+TTY ++IR L G+ ++ + M + + E I+ SL
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSL 508
>At4g02820.1 68417.m00382 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 532
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM-LPVKPNITTYELIIRALRXAGDLNQATEVLSNMKA 711
YN +L YI+ + V I ++ + P+I TY L + A D+ A +V K
Sbjct: 200 YNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKE 259
Query: 712 QNL 720
+ L
Sbjct: 260 EKL 262
>At2g17525.1 68415.m02027 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat; gene
structure supported by cDNA sequence and Brassica genome
sequence alignments.
Length = 626
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 517 KFQVDHYNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATE 690
K V N L++ Y A + V F +M PN+ TY L+I G L+ A +
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 691 VLSNMKAQNLPATENIFNSL 750
++MK + FN+L
Sbjct: 375 TFNDMKTDAIRWNFATFNTL 394
>At1g79080.1 68414.m09220 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 576
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTIVVTTFINKMLPVK--PNITTYELIIRALRXAGDLNQATEVLS 699
VD++N ++ RT + M+ K PN TTY +++ + +L A EVL
Sbjct: 494 VDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLD 553
Query: 700 NMKAQNL 720
++ + +
Sbjct: 554 ELRLRKV 560
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +1
Query: 529 DHYNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLSN 702
D Y ++ + T + +M P+ TY +IR L G A EVLS
Sbjct: 424 DFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSI 483
Query: 703 M-KAQNLPATENIFNSL 750
M +++N T + FN++
Sbjct: 484 MEESENCKPTVDNFNAM 500
>At1g26460.1 68414.m03227 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 630
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLS 699
+D YN LL A+ +T T ++ VKP+ TY L++ A D A V+
Sbjct: 505 IDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRTYSLLVDAHLINRDPKSALTVVD 564
Query: 700 NM-KAQNLPATENI 738
+M KA P+ E +
Sbjct: 565 DMIKAGFEPSRETL 578
>At1g02420.1 68414.m00189 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile: PF01535 PPR
repeat
Length = 491
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN ++ + R +++M+ + PN TTY L R L A DL ++ E+ M
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRML 378
Query: 709 AQN-LPATEN 735
LP T++
Sbjct: 379 GNECLPNTQS 388
>At5g64320.1 68418.m08079 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 730
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
V N TY +I A G++ +A ++++ M Q P E +NSL
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
>At4g26680.1 68417.m03844 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 521
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PN+ T+ +I A L +A++V MKA N+ +N+L
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
>At2g19280.1 68415.m02250 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 693
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 544 LLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQN 717
LL Y R NK+L +KP++ Y +I GD+ +A E++ M +
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 718 LPATENIFNSL 750
+ E+ ++L
Sbjct: 649 MLPNESTHHAL 659
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y ++ Y RT + +L P++TT ++I A G ++ A V NMK
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 709 AQNLPATENIFNSL 750
+ L +N+L
Sbjct: 471 TEGLKLDVVTYNNL 484
>At1g62680.1 68414.m07074 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR repeats Pfam Profile:
PF01535
Length = 542
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y+ LL A++ N + + +M + + P+I TY +I L +++A ++ M
Sbjct: 257 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 316
Query: 709 AQNLPATENIFNSL 750
++ A +N+L
Sbjct: 317 SKGCLADVVSYNTL 330
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+Q + F ++M + P+I TY +++ L G+L +A + +M+
Sbjct: 362 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 421
Query: 709 AQNL 720
+ +
Sbjct: 422 KREM 425
>At1g52640.1 68414.m05944 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 523
Score = 31.9 bits (69), Expect = 0.47
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN LL A + +M L +KP+ ++ + I A AGD++ A +VL MK
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 709 AQNLPATENIFNSL 750
+L FN +
Sbjct: 306 RYDLVPNVYTFNHI 319
>At5g61990.1 68418.m07780 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 974
Score = 31.5 bits (68), Expect = 0.62
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPV------KPNITTYELIIRALRXAGDLNQATEVL 696
+N L+ +T + T +N+++ KPN TY ++I L G+L A E+
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 697 SNMKAQNLPATENIFNSL 750
M+ NL T + SL
Sbjct: 829 HQMQNANLMPTVITYTSL 846
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN LL + + +++M + PN TY II +GDL +A + MK
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 709 AQNLPATENIFNSL 750
+ L ++ +L
Sbjct: 725 LKGLVPDSFVYTTL 738
>At5g02860.1 68418.m00229 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 819
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKML--PVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
YN LL Y ++R +N+M+ P+I TY +I A G L++A E+ + M
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +1
Query: 484 ELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRAL 657
E++ L K + YN ++ AY N R + ++M + P++ TY I +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 658 RXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+A V+ M +N +NS+
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
>At1g10270.1 68414.m01157 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat;
similar to ESTs gb|R30192 and gb|AA651017
Length = 913
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 535 YNELLQAYIAN---NRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
YN+++ A+ + + V I P P+ TY + + L AG + A +L M
Sbjct: 219 YNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREM 278
Query: 706 KAQNLPATENIFNSL 750
++ A ++N+L
Sbjct: 279 LSKGQAADSTVYNNL 293
>At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP-glucose:salicylic acid
glucosyltransferase [Nicotiana tabacum] GI:7385017;
contains Pfam profiles PF00201: UDP-glucoronosyl and
UDP-glucosyl transferase, PF01535: PPR repeat
Length = 1184
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+ EL+ Y N M+ PN+ TY +I L GDL+ A E+L M
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 709 AQNLPATENIFNSL 750
L +NS+
Sbjct: 927 KIGLQPNIFTYNSI 940
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PNI TY I+ L +G++ +A +++ +A L A + +L
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975
>At5g46100.1 68418.m05668 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 472
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y+ L+ + R++ M+ +PN+ TY +I L + +A E+L M
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Query: 709 AQNLPATENIFNSL 750
Q L ++ +
Sbjct: 325 LQGLKPDAGLYGKV 338
>At4g20090.1 68417.m02938 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 660
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
KPNI Y +++ L G N+A E+L+ M A ++SL
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
>At3g18110.1 68416.m02303 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 1429
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLSNM 705
Y L+ + NRT+ +++ML V KP + TY +I AG +A + S M
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
>At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 738
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLS 699
V+ ++ L+ + + NKM+ + PN+ TY +I+ G +++A VLS
Sbjct: 377 VNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLS 436
Query: 700 NMKAQNL 720
++++ L
Sbjct: 437 KVQSEGL 443
>At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 915
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +1
Query: 583 VTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNM-KAQNLPATENIFNSL 750
V + KM+ V PN +YE +I + G+L A +V +M + + + +E +FN+L
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
PN+ TY +I G + A +V+ M+++ L +N L
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
>At5g50990.1 68418.m06322 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 511
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 553 AYIANNRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
AY NR+ + + L + P + LII +L G+ A +VL N QN+
Sbjct: 51 AYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNV 106
>At5g12100.1 68418.m01421 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 816
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
VK N T +++ AL G + +A E+L A+ L E I+N++
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ + + F +ML ++ N+ TY +I L G L++A ++L +
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 709 AQNLPATENIFNSL 750
+ L +NSL
Sbjct: 592 RKGLKPDVFTYNSL 605
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPVK--PNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ R ++ML + P++ TY +I AG+ ++ +V MK
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 709 AQNLPATENIFNSL 750
A ++ + FN+L
Sbjct: 277 ADHIEPSLITFNTL 290
>At5g01110.1 68418.m00015 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 729
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +1
Query: 469 RMALVELVWNTLKPHTK----FQVDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNIT 630
R+ VEL W + ++ V N ++ A + + V TF++++ V P+I
Sbjct: 212 RIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIV 271
Query: 631 TYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
TY +I A G + +A E+++ M + +N++
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
>At2g32630.1 68415.m03983 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 624
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
V+PN TY ++I A G + +A ++ +NM+A + + SL
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
>At2g27800.1 68415.m03370 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 427
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+PN TY+ +I L G A E+LS MK + +NSL
Sbjct: 306 EPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSL 350
>At2g02150.1 68415.m00151 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1141
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 538 NELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLSNMKA 711
N LL + +T V F M+ +P + TY ++I + GD+ A + MK
Sbjct: 99 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158
Query: 712 QNLPATENIFNSL 750
+ L +NS+
Sbjct: 159 RGLVPDTVTYNSM 171
>At1g64100.1 68414.m07261 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 666
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLS 699
V YN ++ + + +KM +P+ +TY +IR AG+++++ E++S
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 700 NMKA 711
M++
Sbjct: 632 EMRS 635
>At1g52620.1 68414.m05941 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 819
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y L+QAY + + + + +M KP+I TY ++I L +G ++ A + +
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 709 AQNLPATENIFNSL 750
+ + I+N L
Sbjct: 443 DRGVSPDAAIYNML 456
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
KPN+ TY +I GD A E M+ ++L
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
>At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 660
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 496 NTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAG 669
N ++ +K V Y L+ Y + +++M+ KP++ TY +++ L G
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Query: 670 DLNQATEVLSNMKAQNLPATENIFNSL 750
+ +A + + L ++SL
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSL 438
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQ 714
+KP+I TY +I+ AG +A E L +M+ +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR 286
>At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 576
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQ 714
+N ++ + N + + F ++M P+ TY +I A +GD N A +VLS+M
Sbjct: 226 WNAIVASCSRNGKLELGLWFFHQM--PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNP 283
Query: 715 N 717
N
Sbjct: 284 N 284
>At5g11310.1 68418.m01320 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 602
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFN 744
P I TY +++ AGDL A+++L M + + T +N
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 601 KMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
K + VKP + TY +I + A EVL MK + +FN +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPI 326
>At3g16890.1 68416.m02159 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 659
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNS 747
++PN TY ++IR+ GD +++ ++ + MK L +N+
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN +Q++ + + ML + KP+ TY +I+AL +G ++A E+ S+++
Sbjct: 568 YNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIE 627
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N L Y V + K+L KP++ T+ LII L A ++ A + M
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML 522
Query: 709 AQNLPATENIFNSL 750
+ E +N L
Sbjct: 523 EWGIEPNEITYNIL 536
>At2g41720.2 68415.m05156 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 683
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N +L AY + + ++ M V+P+ TT+ +II L G +QA ++ ++M+
Sbjct: 119 HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR 178
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
KPN+ TY +I A G L +A E+ M+ +
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
>At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N +L AY + + ++ M V+P+ TT+ +II L G +QA ++ ++M+
Sbjct: 251 HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR 310
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
KPN+ TY +I A G L +A E+ M+ +
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
>At2g17140.1 68415.m01979 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 903
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLS 699
++ YN L+ N+ + +++M + PNI TY I+ L + AT +L
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 700 NMKAQNLPATENIFN 744
M +N+ N+F+
Sbjct: 654 EMMQKNI--APNVFS 666
>At1g63070.1 68414.m07125 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 590
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+KP++ TY +I L G + A+ +LS+M +N+ FN+L
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+ L+ +N+ + +M+ +P++ TY +I L G+ + A +L+ M+
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 709 AQNLPATENIFNSL 750
+ A I+N++
Sbjct: 243 KGKIEADVVIYNTI 256
>At1g62930.1 68414.m07105 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 659
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++PN+ TY +IR L G + A+ +LS+M + + F++L
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
>At1g62720.1 68414.m07079 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR repeats Pfam Profile:
PF01535
Length = 426
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQ 714
YN ++Q Y R ++M +PNI TY +++ L + +A + NM+
Sbjct: 293 YNTIIQGYFQAGRPDAAQEIFSRM-DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 351
Query: 715 NLPATENIFN 744
+ +N
Sbjct: 352 EIELDITTYN 361
>At1g06580.1 68414.m00697 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 500
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
++ L+ Y + + N+M+ V PNI TY +I L G L++A +VL+ +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 709 AQNLPATENIFNSL 750
++ +N+L
Sbjct: 317 SKGFFPNAVTYNTL 330
>At3g57430.1 68416.m06394 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 890
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPVKPNITT-YELIIRALRXAGDLNQATEVLSNMKA 711
++ LL A +N + ++ ++PN+ + Y L+ AG ++ATEV NMK
Sbjct: 690 WSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKE 749
Query: 712 QNL 720
Q +
Sbjct: 750 QGV 752
>At3g44120.1 68416.m04730 F-box family protein contains Pfam:PF00646
F-box domain ; contains TIGRFAM TIGR01640: F-box protein
interaction domain ; contains TIGRFAM TIGR01640: F-box
protein interaction domain
Length = 384
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 167 TRTSNICPIRLNIFKELSSIGVHNPNSLTSPH 72
T+ ICPI +N+ S+ V N SL PH
Sbjct: 61 TKNYRICPINVNLHGTTPSLEVKNEVSLVDPH 92
>At3g29230.1 68416.m03667 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 600
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 523 QVDHYNELLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSN 702
QV+HY L+ R + M P++PN+ + ++ A R +++ A EVL N
Sbjct: 451 QVEHYGCLVDLLGRVGRLKEAIKVVQTM-PMEPNVVIWGALLGACRMHNEVDIAKEVLDN 509
Query: 703 M 705
+
Sbjct: 510 L 510
>At3g13880.1 68416.m01754 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 748
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIF 741
P++ TY +I +L G N+A + +MK + + F
Sbjct: 523 PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAF 563
>At2g15630.1 68415.m01790 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 627
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +1
Query: 595 INKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
I ++ +KP I TY +++ G + A ++S MK++ +N +
Sbjct: 250 IMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPI 301
>At1g63320.1 68414.m07158 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 189
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 622 NITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
N TY +I+ L AGD + A E+ M + +P +N L
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNIL 57
>At1g30290.1 68414.m03704 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 802
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 538 NELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNMKA 711
N + ++ NR F+ +M + + PN+ TY +IR + +A E+L +M +
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340
Query: 712 Q 714
+
Sbjct: 341 K 341
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNM 705
PN TY +I+ LR G L++A +V+ M
Sbjct: 518 PNSITYSVIMHGLRREGKLSEACDVVREM 546
>At1g19525.1 68414.m02432 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 316
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
P+I T ++ +G+ +ATE N+K+ L E I+ ++
Sbjct: 8 PDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAM 51
>At5g59900.1 68418.m07512 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 907
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
VKPN TY ++I GD+++A E L M + +
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKA 711
++P++ Y +IR+L DL++A E++++M+A
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
>At5g39980.1 68418.m04848 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 678
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN +++ Y T + +M ++PN TY II AG L++A + ++
Sbjct: 403 YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLR 462
Query: 709 AQNLPATENIFNSL 750
+ + + ++ ++
Sbjct: 463 SSGVEIDQVLYQTM 476
>At5g21222.1 68418.m02532 protein kinase family protein contains
Pfam profile: PF00069 protein kinase domain
Length = 831
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNM 705
+N L++ ++ N V ++ M VKP++ T+ ++ A GD+ + E+ ++M
Sbjct: 569 FNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM 627
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPAT 729
+ PN+TTYE +I A +A E+L +M+ +N+ T
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPT 741
>At3g60050.1 68416.m06706 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 473
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
PN+ TY +IR L AG+ +A +L M+++ ++++L
Sbjct: 392 PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
>At2g31400.1 68415.m03837 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587, post-transcriptional control of
chloroplast gene expression CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 918
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +1
Query: 517 KFQVDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATE 690
K V YN LL Y + V +M V PN+ TY +I G +A E
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 691 VLSNMKAQNLPATENIFNSL 750
+ K+ L A ++++L
Sbjct: 536 IFREFKSAGLRADVVLYSAL 555
>At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 743
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
P+I TY +I+A GDL+ A E++ M + + N++
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 520 FQVDHY--NELLQAYIANNRTIVVTTFINKMLPVKP-NITTYELIIRALRXAGDLNQATE 690
F+ D+Y N LL T F N ++ + + TY +I A L +A +
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYD 646
Query: 691 VLSNMKAQNLPATENIFNS 747
+LS M+ + L +NS
Sbjct: 647 LLSEMEEKGLEPDRFTYNS 665
>At2g07140.1 68415.m00816 F-box family protein contains Pfam:PF00646
F-box domain ; contains TIGRFAM TIGR01640: F-box protein
interaction domain ; contains TIGRFAM TIGR01640: F-box
protein interaction domain
Length = 384
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 167 TRTSNICPIRLNIFKELSSIGVHNPNSLTSPH 72
T+ ICPI +N+ S+ V N SL PH
Sbjct: 61 TKNYRICPINVNLHGTTPSLEVKNEVSLLDPH 92
>At1g77360.1 68414.m09009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 481
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 493 WNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLPVKP-NITTYELIIRALRXAG 669
W+ + H + V Y+ ++++ + ++ IN M K N+ T+ +++R A
Sbjct: 87 WSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQ 146
Query: 670 DLNQATEVLSNMKAQNLPATENIFNSL 750
+++A + M+ +LP FN L
Sbjct: 147 KVDEAIYAFNVMEKYDLPPNLVAFNGL 173
>At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 614
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N L+ A+ + I ++M+ + PNI TY +I L++A ++ + M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 709 AQNLPATENIFNSL 750
+++ +N+L
Sbjct: 373 SKDCLPDVVTYNTL 386
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
++P++ TY +I L G + A+ +LS+M + + FNSL
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 481 VELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRA 654
V+L +K + +++LL A + +V +F KM L V N+ TY ++I
Sbjct: 50 VDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINC 109
Query: 655 LRXAGDLNQATEVLSNM 705
L L+ A +L M
Sbjct: 110 LCRRSQLSFALAILGKM 126
>At1g22960.1 68414.m02869 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 718
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ YI + + + + + + P+I TY +I L +G+L A + M
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 709 AQ 714
Q
Sbjct: 437 TQ 438
>At5g55840.1 68418.m06958 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 1274
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Frame = +1
Query: 475 ALVELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELII 648
A +EL+ + V YN L+ +NR + M + PN TY +I
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 649 RALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
G + A+++L+ M + L FN+L
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339
>At5g55740.1 68418.m06948 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 830
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRT-IVVTTFINKMLP-VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
+N LL AY + + + F L V PN+ T+ LII +L G +++A ++ M+
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 709 AQNL 720
+ +
Sbjct: 504 SSGI 507
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNM 705
+KP+ T ++ A AGD+NQA E+ +++
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDI 674
>At5g28460.1 68418.m03456 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 766
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
PN TY +I AG L A EV+S MK +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
>At5g28370.1 68418.m03445 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 727
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
PN TY +I AG L A EV+S MK +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
>At4g34830.1 68417.m04942 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 749
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLP 723
VKP+ + +I A +G +++A +VL+ MKA+ P
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHP 604
>At3g61520.1 68416.m06890 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 766
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
PN TY +I AG L A EV+S MK +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
>At3g53700.1 68416.m05931 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 754
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
P++ TY +I L G++ +A EVL M ++ +N+L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN LL + + M +P+I TY +I L AG + A+++L +++
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 709 AQNLPATENIFN 744
+ + T + +N
Sbjct: 603 MKGINLTPHAYN 614
>At3g15590.1 68416.m01975 DNA-binding protein, putative similar to
DNA-binding protein [Triticum aestivum] GI:6958202;
contains Pfam profile: PF01535 PPR repeat
Length = 610
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 484 ELVWNTLKPHTKFQVDHY--NELLQAYIANNRT-IVVTTFINKMLPVKPNITTYELIIRA 654
E ++N +K KF + N+LL Y ++R I + + +KP+ TY +I +
Sbjct: 262 EDIFNKMK-ELKFPTSVFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRATYHFLINS 320
Query: 655 LRXAGDLNQATEVLSNMKAQNL 720
AGD+ +++ +K + +
Sbjct: 321 KGLAGDITGMEKIVETIKEEGI 342
>At3g15130.1 68416.m01914 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 689
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 484 ELVWNTLKPH-TKFQVDHYNELLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIRALR 660
EL L+ H K +V+HY ++ R I+ M P+KPN+ ++ ++ R
Sbjct: 435 ELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM-PIKPNVGIWQTLLSLCR 493
Query: 661 XAGDLNQATEV 693
GD+ EV
Sbjct: 494 VHGDIELGKEV 504
>At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1077
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
P + L++ A GDL++A EVL M+++ L
Sbjct: 906 PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGL 939
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+KP++ TY +II G +++A E+L+ K ++ + +++L
Sbjct: 939 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHAL 984
>At1g74850.1 68414.m08674 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 862
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
P+IT+Y +++ A +G + +A V M+A N ++ L
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +1
Query: 526 VDHYNELLQAYIANNRTIVVTTFINKMLPV--KPNITTYELIIRALRXAGDLNQATEVLS 699
+ YN LL+AY + ++M PN TY +++ +G + ++
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 700 NMKAQNLPATENIFNSL 750
MK+ N +N L
Sbjct: 377 EMKSSNTDPDAATYNIL 393
>At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 491
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNM 705
YN L+ Y T V I ++ V P+ TY + +RAL D++ V+ M
Sbjct: 161 YNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEM 219
>At1g19290.1 68414.m02398 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 745
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
PNI TY +I+ L G++++A +L + + + +N+L
Sbjct: 629 PNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 672
>At1g07740.1 68414.m00835 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat;
possible frameshift prevents accurate annotation of the
gene product
Length = 459
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ N+ + + M+ ++PN T+ L+++ L G+ N+A +++ +M+
Sbjct: 224 YNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME 283
>At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to
cytochrome P450 71B10 (SP:Q9LVD2) [Arabidopsis thaliana]
Length = 1483
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
V+PN+ TY IIR L G L +A + + + + + E ++ +L
Sbjct: 820 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTL 865
>At4g39620.1 68417.m05600 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 563
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/59 (22%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 583 VTTFINKMLPVK---PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
V +++KM ++ PN+ TY +++RA +G ++Q + ++ + FN +
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
>At3g06920.1 68416.m00821 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 871
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
PN++TY ++I L AG L+ A E+ +M+ L
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
>At1g79540.1 68414.m09272 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 780
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +1
Query: 619 PNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
P+I +Y ++I AGD++ A ++L+ ++ + L +N+L
Sbjct: 515 PDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
>At1g36160.1 68414.m04495 acetyl-CoA carboxylase 1 (ACC1) nearly
identical to acetyl-CoA carboxylase 1 (ACC1) [Arabidopsis
thaliana] GI:11869927
Length = 2247
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLP-ATENIFNSL 750
K N++ YEL + LR LNQ E+ ++ Q LP N+ N +
Sbjct: 2185 KDNVSNYELKLSELRAQKLLNQLAEIGNSSDLQALPQGLANLLNKV 2230
>At1g11900.1 68414.m01372 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 367
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMK 708
KP++ TY ++ L AG +N+ VLS MK
Sbjct: 209 KPDVITYNSVLDILGRAGLVNEILGVLSTMK 239
>At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 793
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFIN--KMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
Y+ LL+AY N+T VT+ + + ++ + + YE +I++ D + A V MK
Sbjct: 534 YSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQSQVIQNDTHGALNVFKEMK 593
>At5g46580.1 68418.m05735 pentatricopeptide (PPR) repeat-containing
protein contains similarity to 67kD chloroplastic
RNA-binding protein, P67.1 [Raphanus sativus]
GI:9755886; contains Pfam profile PF01535: PPR repeat
Length = 711
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN LL+A + + + N+ML + PN T +++ A A ++ MK
Sbjct: 329 YNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMK 388
Query: 709 AQNLPATENIFNSL 750
A+ P ++N+L
Sbjct: 389 AKKWPMDFILYNTL 402
>At5g43790.1 68418.m05355 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 460
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 523 QVDHYNELLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSN 702
+V+HY L+ + R I KM PVKPN T + + + + GD + L +
Sbjct: 352 KVEHYGCLVDLLGRSGRLEEAEECIKKM-PVKPNATLWRSFLGSSQTHGDFERGEIALKH 410
Query: 703 M 705
+
Sbjct: 411 L 411
>At5g38730.1 68418.m04684 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 596
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ Y + + ++M V PNI TY I G + +AT + +K
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK 300
>At4g24790.1 68417.m03550 expressed protein ; expression supported
by MPSS
Length = 815
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 139 RIGQILDVRVDPMHKAINKCSVNLSSGRGNISQTVSTEFLKNTDRMSSEELLEKLIAGLS 318
R +++ ++DPM +V + GN ++ S L+ R +SEE ++KL L
Sbjct: 502 RARELMRSKIDPMQLISQLANVIMDIIAGNSQESSSATRLRFLTRHTSEEEMQKLRNALK 561
Query: 319 --TDIHQKNRVYKN 354
+D + R KN
Sbjct: 562 ILSDAEKHLRASKN 575
>At3g20150.1 68416.m02554 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1114
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 154 LDVRVDPMHKAINKCSVNLSS 216
LD+ +PM+ A N+CSV+LSS
Sbjct: 694 LDIIDNPMNPASNRCSVSLSS 714
>At3g07290.1 68416.m00868 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535: PPR repeat
Length = 880
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
V PN TY ++++ G L++A E + M + + I++SL
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692
>At2g06000.2 68415.m00654 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 536
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKA 711
+P+I TY +I+ + +LN+A+E+ ++K+
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
>At2g06000.1 68415.m00653 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 536
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 616 KPNITTYELIIRALRXAGDLNQATEVLSNMKA 711
+P+I TY +I+ + +LN+A+E+ ++K+
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
>At2g01510.1 68415.m00075 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 584
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKM--LPVKPNITTYELIIRALRXAGDLN 678
+N L + Y+ N KM L V+P+ TY +++A+ GD +
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFS 126
>At1g80270.2 68414.m09398 DNA-binding protein, putative similar to
DNA-binding protein [Triticum aestivum] GI:6958202;
contains Pfam profile: PF01535 PPR repeat
Length = 596
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +1
Query: 484 ELVWNTLK----PHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIR 651
ELV+N +K P + F D LL I + V + K +KP++ TY+++I
Sbjct: 249 ELVFNKMKDLGFPLSGFTCDQML-LLHKRIDRKKIADVLLLMEKE-NIKPSLLTYKILID 306
Query: 652 ALRXAGDLNQATEVLSNMKAQNL 720
D++ ++L MK + +
Sbjct: 307 VKGATNDISGMEQILETMKDEGV 329
>At1g80270.1 68414.m09397 DNA-binding protein, putative similar to
DNA-binding protein [Triticum aestivum] GI:6958202;
contains Pfam profile: PF01535 PPR repeat
Length = 596
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +1
Query: 484 ELVWNTLK----PHTKFQVDHYNELLQAYIANNRTIVVTTFINKMLPVKPNITTYELIIR 651
ELV+N +K P + F D LL I + V + K +KP++ TY+++I
Sbjct: 249 ELVFNKMKDLGFPLSGFTCDQML-LLHKRIDRKKIADVLLLMEKE-NIKPSLLTYKILID 306
Query: 652 ALRXAGDLNQATEVLSNMKAQNL 720
D++ ++L MK + +
Sbjct: 307 VKGATNDISGMEQILETMKDEGV 329
>At1g53330.1 68414.m06045 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 471
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 517 KFQVDH--YNELLQAYIANNRTIVVTTFINKMLP--VKPNITTYELIIRALRXAGDLNQA 684
K +VD Y+ L+ + I R+ V+ + +M KP+ TY ++I D A
Sbjct: 253 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 312
Query: 685 TEVLSNMKAQNL 720
VL M + L
Sbjct: 313 NRVLDEMVEKGL 324
>At1g15480.1 68414.m01862 DNA-binding protein, putative similar to
DNA-binding protein [Triticum aestivum] GI:6958202;
contains Pfam profile PF01535: PPR repeat
Length = 623
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNL 720
+KPN+ TY+++I + D+ +++ MK++ +
Sbjct: 321 LKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGV 356
>At5g55210.1 68418.m06882 expressed protein similar to unknown
protein (pir||T04913)
Length = 168
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 137 LNIFKELSSIGVHNPNSLTSPHHIIL 60
+ +F+ S G +N N+ SPHH++L
Sbjct: 43 VGVFRASKSNGRNNSNNSNSPHHLLL 68
>At3g54980.1 68416.m06100 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 851
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 577 IVVTTFINKMLPVKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
IV + + K L KPN TY ++I D A EV+++M + N+ ++ ++
Sbjct: 499 IVFSNILEKGL--KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTI 554
>At1g31840.1 68414.m03912 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR domains: Pfam profile:
PF01535: PPR repeat
Length = 690
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/91 (18%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +1
Query: 484 ELVWNTLKPHTKFQVDHYNELLQAYIANNRTIVVTTFINKML--PVKPNITTYELIIRAL 657
+L L K V ++ + Y+ + + +ML + PN+ TY ++I+ L
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 658 RXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
G + +A + + + + + ++SL
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
>At1g11710.1 68414.m01344 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 657
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 613 VKPNITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
V PN TY +I AG L+ A + +M + E + +L
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGAL 332
>At1g08610.1 68414.m00954 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 559
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 535 YNELLQAYIANNRTIVVTTFINKMLPVK--PNITTYELIIRALRXAGDLNQATEVLSNMK 708
YN L+ F +ML K P+I TY ++ A+ G ++ A E+L +K
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 709 AQNLPATENIFNSL 750
P +NS+
Sbjct: 412 NTCCPPGLITYNSV 425
>At1g05600.1 68414.m00580 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 504
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +1
Query: 622 NITTYELIIRALRXAGDLNQATEVLSNMKAQNLPATENIFNSL 750
+I Y +++ AL AG+++ A E+L + + L A + ++ +
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,136,064
Number of Sequences: 28952
Number of extensions: 231549
Number of successful extensions: 1152
Number of sequences better than 10.0: 144
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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