BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0654 (700 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 462 e-132 X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 447 e-128 AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 352 2e-99 EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 319 2e-89 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 38 1e-04 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2 AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.8 D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.7 AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.5 AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.5 >AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha F2 protein. Length = 461 Score = 462 bits (1139), Expect = e-132 Identities = 217/229 (94%), Positives = 220/229 (96%) Frame = +3 Query: 12 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191 + K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62 Query: 192 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 371 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE Sbjct: 63 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 122 Query: 372 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 551 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIG Sbjct: 123 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 182 Query: 552 YNPAAVAFVPISGWHGDNMLEPSTKMPWFXGWQVERXESKADGKCLIEA 698 YNPAAVAFVPISGWHGDNMLE S+KMPWF GW VER E K +GKCLIEA Sbjct: 183 YNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEA 231 >X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha protein. Length = 461 Score = 447 bits (1101), Expect = e-128 Identities = 209/229 (91%), Positives = 216/229 (94%) Frame = +3 Query: 12 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191 + K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62 Query: 192 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 371 LKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GE Sbjct: 63 LKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGE 122 Query: 372 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 551 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIG Sbjct: 123 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIG 182 Query: 552 YNPAAVAFVPISGWHGDNMLEPSTKMPWFXGWQVERXESKADGKCLIEA 698 YN A+VAFVPISGWHGDNMLEPS K PW+ GW+VER + ADGK LIEA Sbjct: 183 YNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEA 231 >AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-alpha protein. Length = 274 Score = 352 bits (865), Expect = 2e-99 Identities = 165/174 (94%), Positives = 167/174 (95%) Frame = +3 Query: 177 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 356 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60 Query: 357 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 536 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSY Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120 Query: 537 IKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFXGWQVERXESKADGKCLIEA 698 IKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWF GW VER E K +GKCLIEA Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEA 174 >EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-alpha protein. Length = 172 Score = 319 bits (783), Expect = 2e-89 Identities = 149/158 (94%), Positives = 151/158 (95%) Frame = +3 Query: 225 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 404 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60 Query: 405 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 584 REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPI Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120 Query: 585 SGWHGDNMLEPSTKMPWFXGWQVERXESKADGKCLIEA 698 SGWHGDNMLE S+KMPWF GW VER E K +GKCLIEA Sbjct: 121 SGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEA 158 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 37.5 bits (83), Expect = 1e-04 Identities = 36/117 (30%), Positives = 52/117 (44%) Frame = +3 Query: 264 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 443 VT +D PGH FI G D VL+VAA G E QT + +A V Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246 Query: 444 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 614 +IV +NK+D + ++E K + I+++G + V IS G N+ E Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGI--VIEELG---GEIQCVKISALKGINLRE 298 Score = 25.4 bits (53), Expect = 0.52 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +3 Query: 18 KTHINIVVIGHVDSGKST 71 K H + ++GHVD GK+T Sbjct: 143 KRHPIVTIMGHVDHGKTT 160 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 24.2 bits (50), Expect = 1.2 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +3 Query: 27 INIVVIGHVDSGKST 71 INI IGHV GKST Sbjct: 43 INIGTIGHVAHGKST 57 >AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 23.0 bits (47), Expect = 2.8 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +3 Query: 249 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 350 T KYY D P + FIKN+ ++ +D LI Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327 >D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 22.6 bits (46), Expect = 3.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +3 Query: 249 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 350 T KYY D P + FIKN+ ++ +D L+ Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327 >AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic acetylcholine Apisa7-2 subunit protein. Length = 461 Score = 21.4 bits (43), Expect = 8.5 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = -3 Query: 626 FG*RLQHVVSVPSRNGHESDSSWV 555 FG L H++ V +N + + WV Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58 >AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase protein. Length = 580 Score = 21.4 bits (43), Expect = 8.5 Identities = 7/20 (35%), Positives = 13/20 (65%) Frame = +1 Query: 469 WIPLNHHTVSPDLRKSRRKY 528 W+P+N + S +L +R+Y Sbjct: 443 WLPVNENYKSLNLAAQKREY 462 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 198,236 Number of Sequences: 438 Number of extensions: 4177 Number of successful extensions: 17 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21439440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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