Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0650
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0072 + 19463801-19464166,19464608-19464701,19464805-194649... 66 3e-11
03_02_0136 + 5828645-5828669,5829207-5829282,5829634-5829913,583... 58 7e-09
12_01_0255 + 1888193-1888914,1890247-1890460,1890535-1890615,189... 32 0.38
07_01_0013 - 99952-100413,100534-100704 32 0.50
04_03_0555 + 17087996-17088406 31 0.88
08_02_0797 + 21307534-21307639,21307907-21308988,21309385-213094... 31 1.2
08_02_1607 - 28201729-28201818,28201913-28201972,28202040-282020... 30 1.5
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 30 2.0
04_04_1395 + 33219711-33220629,33220750-33220787 30 2.0
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000... 30 2.0
03_01_0050 + 430744-431337,432131-432249,432539-433084,433177-43... 30 2.0
11_01_0257 + 1972111-1972832,1974214-1974427,1974502-1974582,197... 29 2.7
02_01_0085 + 610872-611297 29 2.7
12_02_0604 + 20920609-20922144 29 3.5
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 3.5
05_05_0123 - 22553400-22554509 29 3.5
05_01_0556 - 4876849-4877328 29 3.5
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 29 3.5
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 29 3.5
03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228 29 3.5
08_01_0169 - 1396657-1396710,1396801-1396843,1397440-1397904,139... 29 4.7
04_04_0978 - 29856872-29858023 29 4.7
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 29 4.7
12_02_0323 + 17518887-17519882 28 6.2
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 28 6.2
11_03_0010 - 8922361-8922375,8923888-8924610 28 6.2
06_03_0331 - 19644913-19645287 28 6.2
02_03_0246 - 16807619-16808145,16808208-16808868 28 6.2
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 28 6.2
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 25 6.8
12_02_1215 + 27070164-27070302,27070308-27071098 28 8.2
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 28 8.2
05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 28 8.2
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 28 8.2
04_01_0599 + 7871933-7872004,7872696-7873168,7873257-7873334,787... 28 8.2
03_06_0233 + 32530174-32530492,32531081-32531127,32531277-325314... 28 8.2
03_01_0030 + 290232-291020 28 8.2
02_04_0307 - 21905897-21906490,21906581-21906722,21907116-219072... 28 8.2
02_04_0305 - 21873195-21873788,21873878-21874019,21874597-218747... 28 8.2
>02_04_0072 +
19463801-19464166,19464608-19464701,19464805-19464926,
19465033-19465130,19465461-19465560
Length = 259
Score = 66.1 bits (154), Expect = 3e-11
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Frame = +2
Query: 83 ENGG-PRSELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIE 259
++GG + +++L+ A +E+ ++ +++ E +E TLV L+ QG+Q+ R
Sbjct: 51 DSGGLEQQSVQELENYAAYKAEETTDALGGCLRIAENIREDAANTLVTLNKQGQQISRTH 110
Query: 260 EGMDQINADMREAEKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGNDDG--KVVNNQPQ 433
E +I+ D+ + E L + G P K ++ G +DD K ++ Q
Sbjct: 111 EKAVEIDQDLSKGESLLGSLG---GFFSKPW-KPKKTRQIKGPAHVSDDSFKKKASHIEQ 166
Query: 434 RVMDERNGIGPQAGYIGRITND---------AREDEMEENMGQVNTMIGNLRNMALDMGS 586
R E+ G+ P R + + + ++ + ++ ++G L+ MA DMGS
Sbjct: 167 R---EKLGLSPSGKSANRSYAEPTTAMEKVQVEKQKQDDALDDLSGVLGQLKGMACDMGS 223
Query: 587 ELENQNRQIDRINRKGESNETRXTLANQRAHELLK 691
EL+ QN+ +D + + +R ANQRA +L++
Sbjct: 224 ELDRQNKALDDLQGDVDELNSRVKGANQRARKLIE 258
>03_02_0136 +
5828645-5828669,5829207-5829282,5829634-5829913,
5830372-5830462,5830541-5830665,5830742-5830839,
5830948-5831047
Length = 264
Score = 58.0 bits (134), Expect = 7e-09
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 10/204 (4%)
Frame = +2
Query: 107 LEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINAD 286
+++L+ A +E+ ++ E +E +TLV L QGEQ+ R I D
Sbjct: 65 IQELEDYAVDKVEETSRKVNDCVRAAEAIREDATKTLVTLHRQGEQITRTHRVAADIEHD 124
Query: 287 MREAEKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGNDDGKVVNNQPQRVMDERNGIG- 463
+ +EK L + P + K + N N+ QR +R GI
Sbjct: 125 LSMSEKLLGSLGGLFSKTWKP-KRNQQIKGPIS--QNNSFTSSANHMEQR---QRLGISS 178
Query: 464 ---PQAGYIGRITNDARED------EMEENMGQVNTMIGNLRNMALDMGSELENQNRQID 616
P + R A E + ++ + ++ M+G L+ MALDMG+E+E QN+ +D
Sbjct: 179 TRQPSPNQVHRSPATAIEKVQVEIAKQDDALSDLSNMLGELKGMALDMGTEIERQNKSLD 238
Query: 617 RINRKGESNETRXTLANQRAHELL 688
+ R ANQR LL
Sbjct: 239 AFGDDVDELNFRVKGANQRGRRLL 262
>12_01_0255 +
1888193-1888914,1890247-1890460,1890535-1890615,
1890753-1890842,1890950-1891036,1891553-1891653,
1891966-1892011,1892366-1892440,1892557-1892640,
1892721-1892936,1893216-1893358,1893488-1893629
Length = 666
Score = 32.3 bits (70), Expect = 0.38
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = -1
Query: 586 GTHVQGHVAQIP------DHGVHLTHVLLHFVFTSVVRYPPDISSLRADPIAFIHHSLRL 425
G HVQ H A + + G+H +L + T + P DI RA+ + LRL
Sbjct: 375 GLHVQPHKAIVGANAFAHESGIHQDG-MLKYKGTYEIISPDDIGLTRANEFGIVLGKLRL 433
Query: 424 IVDHLTVIVALP 389
+ HLT+ ALP
Sbjct: 434 NIAHLTLRKALP 445
>07_01_0013 - 99952-100413,100534-100704
Length = 210
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 539 SLDPCSPPFRLHERRSLSSRYIQPAGRSHCVHP 441
S+ PC P H SS + PA R HC HP
Sbjct: 115 SVPPCRPCSATHAGLPQSSSPLMPASRCHCRHP 147
>04_03_0555 + 17087996-17088406
Length = 136
Score = 31.1 bits (67), Expect = 0.88
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 272 GPCPPRFCPIVLPGRLERPEYECRPPCSP 186
GPCPPR P P R P+Y C +P
Sbjct: 103 GPCPPRGFPFNTPSRGCNPKYGCNTGHNP 131
>08_02_0797 +
21307534-21307639,21307907-21308988,21309385-21309432,
21309705-21310217
Length = 582
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 514 FVFTSVVRYPPDISSLRADPIAFIHH 437
FV + RYPPD+++LR D IA H
Sbjct: 341 FVLSDFGRYPPDVANLRKDVIAPYKH 366
>08_02_1607 -
28201729-28201818,28201913-28201972,28202040-28202096,
28203526-28203670,28204318-28204331
Length = 121
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 491 TNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQIDRI 622
++ E E ++ M ++ + L+ + D+ E+EN NR +DR+
Sbjct: 29 SSQIHEHENDQAMDSLHDRVSVLKRLTGDIHEEVENHNRMLDRM 72
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/73 (24%), Positives = 40/73 (54%)
Frame = +2
Query: 98 RSELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQI 277
+ ELEQ++ + ++ + LES RR+ ++ E+S EA R+ L + + + + +
Sbjct: 879 KDELEQVEAQKVELKENQLESHRRLSEVQEDS-EALRRSNAKLQATVDHVVEECKSLQTL 937
Query: 278 NADMREAEKNLSG 316
AD+++ + + G
Sbjct: 938 TADLKKQKLEVHG 950
>04_04_1395 + 33219711-33220629,33220750-33220787
Length = 318
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = -2
Query: 219 TRVRMPASLLSSHSCIIRLVDSNDSSVT*PARICSCSSSLRGPPFSAGGTAAGXPC 52
TRV +S HS I VD N + AR C+CS G P+ A G PC
Sbjct: 260 TRVSQWTRCVSVHSAIDDAVDGN---LYGRAR-CNCSKGYEGNPYLANGCQDCGPC 311
>03_06_0614 -
35099225-35099461,35099545-35099694,35099919-35100066,
35100152-35100231,35100428-35100594,35100692-35100940,
35101025-35102310,35102423-35102544,35102946-35103272
Length = 921
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 47 KQQGMPAAVPPAENGGPRSELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVAL 226
K++ +P PP + GG E E+ D + T + + E + +G+
Sbjct: 214 KEEPLPLHEPPRDGGGSAGEEEEEH-------DVGTKETEPVNAVSGEQQPSGVDPAELS 266
Query: 227 DDQGE-QLDRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCNKGAS 367
DQ + +D ++G ++ AD ++ L G CVLP G S
Sbjct: 267 PDQVQGDVDPSDKG-EESTADQKDEISELPGEGASVLYCVLPERNGHS 313
>03_01_0050 +
430744-431337,432131-432249,432539-433084,433177-433483,
433605-433773,433861-433960,435805-436103,436796-436869,
437007-437442,437622-437650
Length = 890
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +2
Query: 335 ICVLPCNKGASFKEDDGTWKGNDDGKVVNNQPQRVMDERNGIGPQAGYIGRITNDAREDE 514
IC L ++ + + WK N D V N + + R+ + Y+ N +R+D
Sbjct: 680 ICQLSSHRDGTIYNNQLYWKNNYDIDVTNRE-----ETRDHVDSMLNYV---FNRSRDDP 731
Query: 515 MEENMGQVNTMIGNLRNMAL 574
+ N G + M G R +AL
Sbjct: 732 IAVNQGSLIEMTGPKRGIAL 751
>11_01_0257 +
1972111-1972832,1974214-1974427,1974502-1974582,
1974720-1974809,1974911-1974997,1975484-1975584,
1975892-1975937,1976272-1976346,1976459-1976542,
1976620-1976861,1977067-1977258,1977391-1977532
Length = 691
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = -1
Query: 586 GTHVQGHVAQIP------DHGVHLTHVLLHFVFTSVVRYPPDISSLRADPIAFIHHSLRL 425
G HVQ H A + + G+H +L + T + P DI RA+ + LRL
Sbjct: 375 GLHVQPHKAIVGANAFAHESGIHQDG-MLKYKGTYEIISPDDIGLTRANEFGIVLGKLRL 433
Query: 424 IVDHLTVIVALP 389
+ HLT+ LP
Sbjct: 434 NLAHLTLRKPLP 445
>02_01_0085 + 610872-611297
Length = 141
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 683 ARERAGSPEXSSFHLTLPCD*CGRSVGSGSRAR--NPCPRPCCADS 552
AR RA +S + GR+ S +R+R +P P+PCCA+S
Sbjct: 86 ARSRAAPDPPTSCPPSRQISDRGRAAASPARSRPSSPRPQPCCAES 131
>12_02_0604 + 20920609-20922144
Length = 511
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 152 LESTRRMMQLCEESKEAGIRTL-VALDDQGEQLDRIEEGMDQINADMREAEKNLSG 316
L+S ++ C K+ I L VAL ++ E++D + + ++Q+N ++ EA + G
Sbjct: 430 LKSKIEAIENCNVEKDGEIGKLKVALMEKREKIDVLIKDIEQLNLEVAEAHRKRKG 485
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 320 PSRTDSSRPPACPR*SGPCPPRFCPIVLPGRLE-RPEYECRP 198
P ++ PP P+ +GP PPR P +PG + RP +P
Sbjct: 592 PPAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPPPPLKP 633
>05_05_0123 - 22553400-22554509
Length = 369
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 189 SSHSCIIRLVDSNDSSVT*PARICSCSSSLRGPPFSAGGTAA 64
S S I+R SN +S + CS SSS+R S GG AA
Sbjct: 259 SFSSVIVRYSTSNKTSPAPQSSSCSSSSSVRTSSESDGGAAA 300
>05_01_0556 - 4876849-4877328
Length = 159
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 247 GQNRGGHGPDQRGHAGGREE 306
G + GGHGPD GH GGR +
Sbjct: 21 GDDGGGHGPDGDGH-GGRHD 39
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 541 HHDRES-AQHGLGHGFRAREPEPTDRPHQSQGRVK*NEDXSGEPARSRAPQVND 699
H+DRE G G R + + DR + GR + + G R+R P+ +D
Sbjct: 340 HNDRERRVPDNTGRGRRHNDVDDGDRRRDNSGRRRQDSRDPGRHPRNRTPEPSD 393
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = -3
Query: 359 PCCKAARRSRNISPSRTDSSRP--PACPR*SGPCPPRFCPIVLPGRLERPEYECRPPCSP 186
P ++ R + P R+ RP P P +GP P R P C PP P
Sbjct: 34 PSPPSSSRKPPLPPRRSPQKRPGLPTIPE-NGPPAGMATATATPKRTRTPTSTCAPPPPP 92
Query: 185 H 183
H
Sbjct: 93 H 93
>03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228
Length = 628
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +2
Query: 275 INADMREAEKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGNDDGKVVNNQP 430
+ + +++ KN G++ G+C C + S D+ + DDG+V++N+P
Sbjct: 244 LKSAIKKQRKNSGGVKLPFGLC--GCQEEGSRNFDEESMFDPDDGQVLDNEP 293
>08_01_0169 -
1396657-1396710,1396801-1396843,1397440-1397904,
1397999-1399395
Length = 652
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 380 DGTWKGNDDGKVVNNQPQRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQ 535
DG+W G+DD ++ + +M+ G GP+ ++ + + EE +GQ
Sbjct: 328 DGSWHGSDD----DDDGELIMEIEMGTGPRRFPYHKLVDATKSFAPEEKLGQ 375
>04_04_0978 - 29856872-29858023
Length = 383
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 131 GQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQIN--ADMRE 295
G T E + + LCEE +EA R A DD + D + EGM++ N A++RE
Sbjct: 224 GDNTHEVVVVMDGLENLCEEQQEAVSRASTA-DDDHDAKD-VAEGMEEANGAAEIRE 278
>02_04_0481 +
23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/78 (17%), Positives = 44/78 (56%)
Frame = +2
Query: 83 ENGGPRSELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEE 262
E + ELE+++ ++ + ++ + ++ L +E + G++ + LD++ +++++
Sbjct: 710 EKDSLQKELERVEEKSSLLREKLSMAVKKGKGLVQERE--GLKQV--LDEKKSDIEKLKH 765
Query: 263 GMDQINADMREAEKNLSG 316
+D+ NA++ ++ L G
Sbjct: 766 ALDEKNAELENLKQTLDG 783
>12_02_0323 + 17518887-17519882
Length = 331
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 120 CSCSSSLRGPPFSAGGTAAGXPCCFY*HLGKFNAR 16
C CS RG P+ AGG ++G+F AR
Sbjct: 295 CVCSEGYRGNPYVAGGCHGTCVLARMINVGRFRAR 329
>11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920,
16794787-16796964,16797065-16797322,16799815-16800172
Length = 1530
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 602 SGSRARNPCPRPCCADSRSWCSLDPCSPPFRLHERRS 492
+G R P P P S C + P PP RL + RS
Sbjct: 1276 AGLPKRKPWPLPWSGGVTSVCLIPPWPPPIRLKQCRS 1312
>11_03_0010 - 8922361-8922375,8923888-8924610
Length = 245
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 251 RIEEGMDQINADMREAEKNLSGMEKCCGICVL 346
++ +G QI MR AEK M+KC C+L
Sbjct: 131 KLVQGSRQIADSMRAAEKLGHTMDKCISTCIL 162
>06_03_0331 - 19644913-19645287
Length = 124
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 275 SGPCPPRFCPIVLPGRLERPEYECRPPCSP 186
S PPR+ P L G ERPE E PP +P
Sbjct: 64 SAEAPPRWQP--LEGSSERPEAEFPPPPAP 91
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = -3
Query: 359 PCCKAARRSRNISPSRTDSSRPPA---CPR*SG-PCPP 258
PCC RR R SPS + + PPA PR S P PP
Sbjct: 117 PCC-CGRRRRAASPSASPCTTPPATARAPRTSSTPGPP 153
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 262 GHGPDQRGHAGGREESVRDG 321
GHG + G+ GGR ++ RDG
Sbjct: 541 GHGGGRGGYGGGRRDNFRDG 560
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 24.6 bits (51), Expect(2) = 6.8
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -3
Query: 401 RCPSMCRR-PL*TMLPCCKAARRSRNISPSRTDSSRPPACPR*SGPCPPRFCPIVLPGRL 225
RC + + P L C + +R RN + R C G C P CP V RL
Sbjct: 396 RCGGLKKEVPCYQELTCERKCQRLRNCG---RHACRRRCC---EGDCAP--CPEVCDKRL 447
Query: 224 ERPEYECRPPC 192
++C PC
Sbjct: 448 RCGNHKCLSPC 458
Score = 21.8 bits (44), Expect(2) = 6.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 407 RHRCPSMCRR 378
RH+CP C R
Sbjct: 371 RHKCPERCHR 380
>12_02_1215 + 27070164-27070302,27070308-27071098
Length = 309
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 186 RRARRPAFVLWSL*TTRENNWTESRRAWTRSTRTCGRPRRICPGWRN 326
+R RRP FV + + W R +W + CG R+C WR+
Sbjct: 163 QRRRRP-FVEAVVTSAARRGWRR-RGSWALGSSGCGGGDRVCGHWRH 207
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 596 SRARNPCPRPCCADSRSWCSLDPCSPPFRLHERRSLSSRYIQPA 465
S R P P A S S C+PP R R+L SR + A
Sbjct: 23 SARRAPSASPAAAASLPSPSRASCAPPLRASAARTLRSRVVASA 66
>05_02_0053 -
6152204-6152329,6152817-6152981,6154698-6154883,
6155055-6155078,6155649-6155822
Length = 224
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 359 PCCKAARRSRNISPSRTDSSRPPACPR*SGPCPPR 255
P C +A S + SP S P PR + P PPR
Sbjct: 19 PACSSASSSTSPSPHCLLSRANPRPPRLAAPSPPR 53
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 544 HDRESAQHGLGHGFRAREPEPTDRPHQSQ 630
H + H H + R+P+P PH SQ
Sbjct: 36 HQHQQPPHPHHHQYVQRQPQPQQTPHNSQ 64
>04_01_0599 +
7871933-7872004,7872696-7873168,7873257-7873334,
7873446-7873665
Length = 280
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 335 ICVLPCNKGASFKEDDGTWK 394
I +P + A+FK DDG WK
Sbjct: 94 IATVPGSSAAAFKHDDGKWK 113
>03_06_0233 +
32530174-32530492,32531081-32531127,32531277-32531413,
32531673-32531841,32532598-32532885,32533021-32533107,
32533454-32534152,32534244-32534735
Length = 745
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 491 TNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQIDRINRKGESNETRXTLANQ 670
+ND + + N+++ R + G+ELEN+ I I R + + T +
Sbjct: 325 SNDINMSPFSSSQTRANSLVSGCRQVLKRRGAELENELGSIGPIRRIRQKSNMMSTFRDA 384
Query: 671 RA 676
R+
Sbjct: 385 RS 386
>03_01_0030 + 290232-291020
Length = 262
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/91 (28%), Positives = 34/91 (37%)
Frame = -3
Query: 530 PCSPPFRLHERRSLSSRYIQPAGRSHCVHPSLAAADC*PPYRHRCPSMCRRPL*TMLPCC 351
P P RLH R R P RSH C P R RC + P
Sbjct: 101 PALPLLRLHRRTIAHHRIPLPPERSHARDYPRQRRGCSPYCRSRCGARLATP-------- 152
Query: 350 KAARRSRNISPSRTDSSRPPACPR*SGPCPP 258
+R+ ++P+ S++PP PR P P
Sbjct: 153 --DQRTAGLAPTDHCSAKPP--PRSHVPLIP 179
>02_04_0307 -
21905897-21906490,21906581-21906722,21907116-21907247,
21907303-21907433,21908028-21908185,21908299-21908396,
21908511-21908631,21908748-21908965,21909230-21909429
Length = 597
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 470 AGYIGRITNDAREDEMEENMGQVNT-MIGNLRNMALDMGS---ELENQNRQIDRI 622
A IGR+ ND + E E MG+VN+ M+ L + GS +E R++ R+
Sbjct: 469 ANTIGRLLNDMQTYEKEIKMGKVNSVMLHALSHSGGGRGSPEASMEEAKREMRRV 523
>02_04_0305 -
21873195-21873788,21873878-21874019,21874597-21874782,
21874911-21875058,21875172-21875269,21875384-21875469,
21875741-21875825,21879298-21879478,21879682-21879874,
21881429-21881566,21881892-21881900
Length = 619
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 470 AGYIGRITNDAREDEMEENMGQVNT-MIGNLRNMALDMGS---ELENQNRQIDRI 622
A IGR+ ND + E E MG+VN+ M+ L + GS +E R++ R+
Sbjct: 491 ANTIGRLLNDMQTYEKEIKMGKVNSVMLHALSHSGGGRGSPEASMEEAKREMRRV 545
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,175,120
Number of Sequences: 37544
Number of extensions: 521276
Number of successful extensions: 2371
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2368
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -