Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0650
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5546| Best HMM Match : SNARE (HMM E-Value=0.57) 100 1e-21
SB_55311| Best HMM Match : SNARE (HMM E-Value=0.53) 97 2e-20
SB_48420| Best HMM Match : SNARE (HMM E-Value=0.022) 59 4e-09
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_31644| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_41916| Best HMM Match : DUF164 (HMM E-Value=0.8) 33 0.29
SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069) 32 0.51
SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33) 31 0.68
SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15) 31 1.2
SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14) 30 1.6
SB_46288| Best HMM Match : Troponin (HMM E-Value=3.7) 30 1.6
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 30 1.6
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 2.1
SB_36409| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 30 2.1
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_55550| Best HMM Match : PLAC8 (HMM E-Value=0.00022) 29 2.7
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_15686| Best HMM Match : DUF1168 (HMM E-Value=0.87) 29 3.6
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_40786| Best HMM Match : WSC (HMM E-Value=0.44) 29 4.8
SB_24152| Best HMM Match : PKD (HMM E-Value=4.1e-29) 28 6.3
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 28 6.3
SB_53370| Best HMM Match : GnRH (HMM E-Value=7.1) 28 6.3
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09) 28 8.4
SB_26728| Best HMM Match : Disintegrin (HMM E-Value=1.9e-23) 28 8.4
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 28 8.4
SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_27959| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_5546| Best HMM Match : SNARE (HMM E-Value=0.57)
Length = 281
Score = 100 bits (240), Expect = 1e-21
Identities = 51/110 (46%), Positives = 74/110 (67%), Gaps = 17/110 (15%)
Frame = +2
Query: 80 AENGGPRSELEQLQMRAGQVTDE---------------SLESTRRMMQLCEE--SKEAGI 208
+E R+E+ ++QMR ++TDE ++ RR+ +E S++ GI
Sbjct: 172 SEEDRMRNEIARMQMRGDEMTDEQRTPSHSICFRNSVRNIALLRRISLFLQEIESQDTGI 231
Query: 209 RTLVALDDQGEQLDRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCNK 358
+T+V +D+QGEQLDR+EEG+DQINADM+EAE+NL+GMEKCCG+CV P K
Sbjct: 232 KTMVMIDEQGEQLDRVEEGLDQINADMKEAERNLTGMEKCCGLCVCPWKK 281
>SB_55311| Best HMM Match : SNARE (HMM E-Value=0.53)
Length = 56
Score = 96.7 bits (230), Expect = 2e-20
Identities = 39/56 (69%), Positives = 51/56 (91%)
Frame = +2
Query: 191 SKEAGIRTLVALDDQGEQLDRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCNK 358
S++ GI+T+V +D+QGEQLDR+EEG+DQINADM+EAE+NL+GMEKCCG+CV P K
Sbjct: 1 SQDTGIKTMVMIDEQGEQLDRVEEGLDQINADMKEAERNLTGMEKCCGLCVCPWKK 56
>SB_48420| Best HMM Match : SNARE (HMM E-Value=0.022)
Length = 215
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +2
Query: 113 QLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
Q Q+R Q + SL+ST+R + L ++S + I+T L QGEQLDR E+ +D I+ DM
Sbjct: 33 QQQIRIAQ--ERSLDSTKRSLALIDDSHDVAIKTAEELQYQGEQLDRTEKNLDHIHNDMA 90
Query: 293 EAEKNLSGMEKCCG 334
A +N+ M+ G
Sbjct: 91 VANRNIKSMKSIWG 104
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 41.9 bits (94), Expect = 5e-04
Identities = 45/159 (28%), Positives = 58/159 (36%), Gaps = 20/159 (12%)
Frame = -3
Query: 608 VGSGSRARNPCPRPCCADSRSWCSLDPCSPPFRLHERRSLSSRYIQPAGRSHCVHPSLAA 429
V R + CP+PC C ++ CS E R+ P+ R P A
Sbjct: 2001 VSPRKRTQKSCPQPCRRSCNPECPVECCSE----KEIEKFGLRFSNPSPRMIDCSPEKAQ 2056
Query: 428 ADC*PP---YRHRCPSMCRRPL*TMLP--CCKA--------ARRSRN-ISPSRTDSSRPP 291
A + RCP +C + P CC A SR I PS + S P
Sbjct: 2057 ALSKVDEDIHVARCPVICAKVCEPDCPVKCCSALAKQVSILVHNSRKLICPSHCEKSCEP 2116
Query: 290 ACPR*SGPCPPRFCPIVL---PGRLERPEY---ECRPPC 192
CP P PR I++ P P Y +CRPPC
Sbjct: 2117 DCPIRCCPNSPRHVSIIVNSEPKPESCPSYCSKDCRPPC 2155
Score = 28.7 bits (61), Expect = 4.8
Identities = 35/132 (26%), Positives = 49/132 (37%), Gaps = 2/132 (1%)
Frame = -3
Query: 578 CPRPCCADSRSWCSLDPCSPPFRLHERRSLSSRYIQPAGRSHCVHPSLAAADC*PPYRHR 399
CP C D R C L C P L I ++ C P + A +C PY
Sbjct: 2143 CPSYCSKDCRPPCPLKCCEEPGAPKPVTIL----IDSDSKNTC--PKICAQEC-KPY--- 2192
Query: 398 CPSMCRRPL*TMLPCCKAARRSRNISPSRTDSSRPPACPR*SGP-CPPRFCPIVLP-GRL 225
CP + CC+++ + + TD P C P CP + C +V+P +
Sbjct: 2193 CP----------VKCCESS-TAPSTKEYSTDEC-PEICSHNCLPFCPVKCCAVVVPSNQA 2240
Query: 224 ERPEYECRPPCS 189
E C CS
Sbjct: 2241 EATHSSCPSVCS 2252
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +2
Query: 101 SELEQLQMRAGQVTDESLESTRRMMQLCE--ESKEAGIRTLVA-LDDQGEQLDRIEEGMD 271
++LE+ + T E E T R+ QL E E+ EA ++ L L++ E L R + +
Sbjct: 710 AKLEEAFVANSAKTKEIEELTSRVNQLIETKETSEAHVQQLKENLENGQEVLKRKDTTIQ 769
Query: 272 QINADMREAEKNLSGMEK 325
+I++ ++EAE LSG+EK
Sbjct: 770 EISSALKEAENKLSGVEK 787
>SB_31644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 34.7 bits (76), Expect = 0.073
Identities = 51/199 (25%), Positives = 76/199 (38%), Gaps = 12/199 (6%)
Frame = +2
Query: 98 RSELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGE----------QL 247
+SEL L +R G+ E + + L EA + L ++ G +L
Sbjct: 182 KSELTVLSLRDGRKESEMALARSNLRTLTSSLSEANEKLLSMRENAGYLENELNFKRIEL 241
Query: 248 DRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCNK-GASFKEDDGTWKGNDDGKVVNN 424
+RI+E D +NA +RE EK L + K N+ GAS ++ + V
Sbjct: 242 ERIKEERDALNAALREKEKQLLQLTKKVRELETSNNEFGASLSSK------QEELESVRA 295
Query: 425 QPQRVMDE-RNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQ 601
Q + V+ E GI + T AR E E Q I L + G + E
Sbjct: 296 QEELVLKEVERGIAEEMK-----TTRARLIEAEARHEQDERTIAELTQRLREWGRQSEAV 350
Query: 602 NRQIDRINRKGESNETRXT 658
N QI N K + + T
Sbjct: 351 NAQIREANTKQSAAREQVT 369
>SB_41916| Best HMM Match : DUF164 (HMM E-Value=0.8)
Length = 391
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/130 (19%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Frame = +2
Query: 119 QMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMREA 298
++R + +LE+T R+M E+ + D+ ++ R+EE M + +
Sbjct: 95 KIRKAEKEIRALENTLRLMNSRNETYRKSFNKVDETSDEFDEKQRLEEQMRAVMDKYKYK 154
Query: 299 EKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGNDDGKVVNNQPQRVMDERNGIGPQAG- 475
+ + +++ G + +K + ++ G + D+ + QR +D++ G +AG
Sbjct: 155 RRQIRELQEDLGTMQVTLDKLTA--DEQGMVEVIDEKQQKMQNLQRELDDQKGKRERAGK 212
Query: 476 YIGRITNDAR 505
+ +I D R
Sbjct: 213 QVSKIARDVR 222
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 98 RSELEQLQMRAG--QVTDESLESTRR-MMQLCEESKEAGIRTLVALDDQGEQLDRIEEGM 268
R ++ +LQ G QVT + L + + M+++ +E ++ LDDQ + +R + +
Sbjct: 155 RRQIRELQEDLGTMQVTLDKLTADEQGMVEVIDEKQQKMQNLQRELDDQKGKRERAGKQV 214
Query: 269 DQINADMREAEKN 307
+I D+R A+K+
Sbjct: 215 SKIARDVRSAKKS 227
>SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069)
Length = 246
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 107 LEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQ-GEQLDRIEEGMDQ 274
LE L + DESLE+ ++ +ES E +L LD+ E L+ ++E +D+
Sbjct: 116 LESLHESLDESLDESLETLDESLETLDESLETLDESLETLDESLDESLETLDESLDE 172
>SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33)
Length = 321
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -3
Query: 398 CPSMCRRPL*TMLPCCKAARRSRNISPSRTDSSRPPACPR*SGPCPPRFCPIVLPGRLER 219
CPS C+ M P ++ ++++ P+ PPA P P PP PG +
Sbjct: 185 CPSSCQPTCCGMNP----SQLAQSVVPAPQYVHVPPATPT---PKPPPTPKTPKPGAAPK 237
Query: 218 PEYECRPPCSPHIV-ASYA 165
+ C PPC+ ++ ASY+
Sbjct: 238 IKNGCLPPCTTSVMGASYS 256
>SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 335 SRNISPSRTDSSRPPACPR*SGPCPPRFCPIVLPGRLERPE 213
+R+ S +DS+ PP PR SG PP P + G L E
Sbjct: 314 TRSPSGCSSDSTNPPPSPRVSGAVPPLMLPTMRQGVLLHEE 354
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = -2
Query: 387 VPSSSLNDAPLLQGSTQIPQHFSIPDRFFSASRMSALIWSMPSSILSNCSPWSSR--ATR 214
VP SS+ AP+ +P S +R R +W++P S++ W +
Sbjct: 199 VPLSSIPTAPIRYRFQIVPLWRSFSNRSVFGYRFRVYVWTIPVSVIKRALYWLPKDLPHG 258
Query: 213 VRMPASLLSSHSCIIRLVDS 154
+ AS L+S + IR +++
Sbjct: 259 AHLVASTLASDTANIRELET 278
>SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 612
Score = 30.7 bits (66), Expect = 1.2
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = -2
Query: 393 FHVPSSSLNDAPLLQGSTQIPQHFSI-PDRFFSASRMSALIWSMPSSILSNCSPWSSRAT 217
++VPSS L PLL+ S +P S+ P + S ++ + + L+
Sbjct: 493 YYVPSSLLPSPPLLRPSNLLPSLPSLRPFKLAPFSPLTTALQACYLLFLTTTLQACPLLL 552
Query: 216 RVRMPASLLSSHSCIIRLVDSNDSSVT*PARICSCSSSLRGPPFSAGGTAAGXPCC 49
P+SLL S + + + SS+T + CS S GP S G A P C
Sbjct: 553 PYYGPSSLLPSLPLLRPFIVAPFSSLTTALQACSLLSPYYGPS-SLLGRQALVPAC 607
>SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15)
Length = 365
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
Frame = -2
Query: 330 QHFSIPDRFFSAS---RMSALIWSMPSSILSNCSPWSSRATRVRMPASLLSSH----SCI 172
+H IP+R AS R S IW + + I+++ +P SS R P S H SC
Sbjct: 169 RHGHIPNRHIVASWSERGSVHIWDVEAQIIASDNPGSSSQPRESSPLFTFSGHAVFASCS 228
Query: 171 IRLVDSNDSSVT*PARICSCSSSLRGPPFSAGGTAAGXPCCFY*H 37
+ + P++ C S++ + G P + H
Sbjct: 229 VDKTIRIWDARAMPSKACMISTNAHDADVNVISWNRGQPVALFKH 273
>SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14)
Length = 505
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +2
Query: 404 DGKVVNNQPQRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMG 583
DGK++ Q + E+N + GY+G ITN ++EE + + ++ + D+
Sbjct: 337 DGKIIWVIGQAI-PEKNALNQTVGYVGTITNITERKKIEEEFKKSYQKLESIIDAIPDLL 395
Query: 584 SELENQ 601
E++ +
Sbjct: 396 IEIDKE 401
>SB_46288| Best HMM Match : Troponin (HMM E-Value=3.7)
Length = 152
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +2
Query: 104 ELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINA 283
+ EQ +R +V + + ++ M EE +E LDD+ + D+I+E + +
Sbjct: 66 QAEQETVRREKVVENDAKELQKNMD--EEEQELKTEEEKELDDEKQARDKIQEAIKHNSE 123
Query: 284 DMREAEKNLSGMEK 325
M +A K L +E+
Sbjct: 124 AMNKARKFLQDIEE 137
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 377 DDGTWKGNDDGKVVNNQPQRVMDERNGIGPQAGYIGRITND 499
DD + +DDG V +N RV D+ G+G A IGR+++D
Sbjct: 82 DDADGRVSDDGGVGDNAEGRVSDD-GGVGDDA--IGRVSDD 119
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 377 DDGTWKGNDDGKVVNNQPQRVMDERNGIGPQAGYIGRITND 499
DD + +DDG V +N RV D+ G+G A GR+++D
Sbjct: 180 DDANGRVSDDGGVGDNAEGRVSDD-GGVGDNAD--GRVSDD 217
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 98 RSELEQLQMRAGQVTDESLESTRRMMQL--CEESKEAGI-RTLVALDDQGEQLDRIEEGM 268
+S+L+ +M+AG++ + +++ + +L + +A I R + D D++EE M
Sbjct: 535 KSDLQVEKMKAGELKNNLIKTEAEVAELQRAADRHKADIDRREKTISDLRSANDQLEERM 594
Query: 269 DQINADMREAEKNLSGME 322
D A+ EK +G+E
Sbjct: 595 DGYRAENDALEKRNAGLE 612
>SB_36409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Frame = +2
Query: 467 QAGYIG-RITNDAREDEMEENMGQVNTMIG----NLRNMALDMGSELENQNRQIDRINRK 631
+AG + + T+ ARE ++EEN+ ++ + + R M + L++++ QI+R+ R
Sbjct: 216 EAGLLAAKETHHAREQQLEENIREIQSRLDTAEVEFRRMEWENKDTLKDKDLQIERLQRS 275
Query: 632 -GESNE 646
E NE
Sbjct: 276 ISELNE 281
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 29.9 bits (64), Expect = 2.1
Identities = 35/194 (18%), Positives = 83/194 (42%), Gaps = 4/194 (2%)
Frame = +2
Query: 104 ELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQ-LDRIEEGMDQIN 280
E E++ + ++ S+E +R + + + E G + EQ + E+ +++N
Sbjct: 111 ERERVNKKKERLNKGSIEQGKRATEQGKGATEQGKGATEQGKEAIEQGKEACEQERERLN 170
Query: 281 ADMREAEKNLSGMEKCCGICVLPCNKGASFKE--DDGTWKGNDDGKVVNNQPQRVMDERN 454
+ + A K+ + K + +E + + N + + VN + +RV ER
Sbjct: 171 KERKRANKDTERVNKETERVNKETERVNKERERVNKERKRANKETERVNKETERVNKERE 230
Query: 455 GIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQIDRINRKG 634
+ + + + ++++ + Q+N L + E E N++ +R+N++
Sbjct: 231 RVNKKKERLNK-----EKEQLNKEKEQLNKERKRLNKERKRVNKERERLNKEKERLNKET 285
Query: 635 ES-NETRXTLANQR 673
E ++TR L +R
Sbjct: 286 ERLDKTRERLNKER 299
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 29.9 bits (64), Expect = 2.1
Identities = 37/210 (17%), Positives = 86/210 (40%), Gaps = 6/210 (2%)
Frame = +2
Query: 62 PAAVPPAENGGPRSELEQLQ---MRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDD 232
P PA P S++ +++ +R G + + M+ E + +
Sbjct: 356 PRTGNPASETWPPSQIAKIRDQKLREGHDDAGGDDDDNKNMKGATEQGNGASKQGKGASE 415
Query: 233 QGEQLDRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCNKGASFKE--DDGTWKGNDD 406
QG+ I++ +++N + + A K+ + K + +E + + N +
Sbjct: 416 QGK--GEIQQERERLNKERKRANKDTERVNKETERVNKETERVNKERERVNKERKRANKE 473
Query: 407 GKVVNNQPQRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGS 586
+ VN + +RV ER + + + + ++++ + Q+N L +
Sbjct: 474 TERVNKETERVNKERERVNKKKERLNK-----EKEQLNKEKEQLNKERKRLNKERKRVNK 528
Query: 587 ELENQNRQIDRINRKGES-NETRXTLANQR 673
E E N++ +R+N++ E ++TR L +R
Sbjct: 529 ERERLNKEKERLNKETERLDKTRERLNKER 558
>SB_55550| Best HMM Match : PLAC8 (HMM E-Value=0.00022)
Length = 236
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 644 HLTLPCD*CGRSVGSGSRARNPCPR 570
+ T+PC CGRS R RNPC R
Sbjct: 210 YATIPCT-CGRSNSETFRLRNPCGR 233
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 224 LDDQGEQLDRIEEGMDQINADMRE-AEKNLSGMEK 325
LDDQ E + R+++ ++ MRE A+K L+G E+
Sbjct: 3091 LDDQSELVQRLQDDVNSYVESMREKAQKRLNGSEQ 3125
>SB_15686| Best HMM Match : DUF1168 (HMM E-Value=0.87)
Length = 488
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 155 ESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMREAEKNLSGME 322
E RRM + + +EA +D+Q +D +EE +D++ +NLS +
Sbjct: 58 EVMRRMKETIDSQREAIRLRNTEIDNQRSDIDAMEEQIDRLTNINESLRRNLSAKQ 113
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 521 PPFR-LHERRSLSSRYIQPAGRSHCVHPSLAAADC*PPY 408
PP+ HE R+L++ ++P H +LAA PPY
Sbjct: 470 PPYNGQHEHRALATLTVEPGYNGQHEHRALAALTVEPPY 508
>SB_40786| Best HMM Match : WSC (HMM E-Value=0.44)
Length = 230
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 302 KNLSGMEKCCGICVLPCNKGASFKEDDGTWK 394
++ SGME+ C +C L KG F + W+
Sbjct: 183 QDTSGMEQPCDLCGLNIGKGRLFTQGKNNWE 213
>SB_24152| Best HMM Match : PKD (HMM E-Value=4.1e-29)
Length = 1130
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 620 CGRSVGSGSRARNPCPRPCCADSRSWC 540
CGR G S N C RPC D+ C
Sbjct: 91 CGRDYGK-SGVSNECDRPCSGDNTRHC 116
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +2
Query: 431 QRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNR 607
+R+ DE G + + NDARE++ EN+ ++ + + DM + + R
Sbjct: 348 ERLSDEMKKAGLPKEVLS-LMNDAREEKRSENLSKMEKKLSETQEKLQDMEEKFSKEKR 405
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 113 QLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
Q++ QV LE R+ + +KEA +T V L E L+ ++ ++N M
Sbjct: 558 QVETLQSQVDVGKLEINRQQGVIAS-TKEALHKTRVELSMYQEHLEMVQCQQQEVNEFML 616
Query: 293 EAEKNLSGMEK 325
E ++NL M +
Sbjct: 617 EEKRNLEEMTR 627
>SB_53370| Best HMM Match : GnRH (HMM E-Value=7.1)
Length = 244
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 586 GTHVQGHVAQIPDHGVHLTHVLLH 515
GTH Q HV +HG H H + H
Sbjct: 216 GTHRQHHVTYEEEHGTHRQHHVTH 239
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/84 (17%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +2
Query: 431 QRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQ 610
+ + +RN + Y+ + ++ ++ ++EE + +V + NL+ A+++ + +++ +
Sbjct: 3344 ETINKDRNDMAELKRYL--VESEKKKTKLEEEVKRVRRRLENLKQKAIELERQKDDELCE 3401
Query: 611 I--DRINRKGESNETRXTLANQRA 676
+ D+++ + E E R + RA
Sbjct: 3402 VKGDKVSLEKEQWELREAIEELRA 3425
>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
Length = 1084
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = -3
Query: 584 NPCPRPCCADSRSWCSLDPCSPPFRLHERRSLSSRYIQPAGRSHCVHPSLAAADC*PPYR 405
+PCP PC + + L P P HE++ +I P C P +C P
Sbjct: 320 HPCPLPCFEECKPCTELLPKIIPECQHEQQ--VPCHIDP-WEFKCSEPCPKTLECGHPCA 376
Query: 404 HRCPSMC 384
+C C
Sbjct: 377 RKCGDTC 383
>SB_26728| Best HMM Match : Disintegrin (HMM E-Value=1.9e-23)
Length = 1531
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 524 SPPFRLHERRSLSSRYIQPAGRSHCVHPS 438
S P + R L+S+ +Q S+CVHPS
Sbjct: 1421 SCPIDVSRHRRLASKSLQNIRNSYCVHPS 1449
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 442 HHSLRLIVDHLTVIVALPCAVVLFERC 362
HH +I+ T+I+ PC +VL++ C
Sbjct: 595 HHPCTIIIFVTTIIIFDPCLLVLYDVC 621
>SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/65 (21%), Positives = 30/65 (46%)
Frame = +2
Query: 473 GYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQIDRINRKGESNETR 652
G+ + ND R+ + N+G +N +GN +++ L R ++I+ E +
Sbjct: 818 GFYQKSNNDQRQGDAHFNIGILNCKLGNYEEAIVNLTDAL----RLFEKIHNDQEQGDAH 873
Query: 653 XTLAN 667
++ N
Sbjct: 874 LSIGN 878
>SB_27959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 373
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 590 ARNPCPRPCCADSRSWCSLDPCSPPFRLHERRSLS 486
A P PRP C D D CS ++ ++ SLS
Sbjct: 210 ASQPQPRPLCYDECDLLRKDVCSEEYKEVQKESLS 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,883,795
Number of Sequences: 59808
Number of extensions: 532415
Number of successful extensions: 2220
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2212
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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