Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0650
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical ... 248 4e-66
AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical ... 244 5e-65
U41268-1|AAA82433.2| 234|Caenorhabditis elegans Temporarily ass... 78 7e-15
L14710-5|AAK84538.1| 277|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 33 0.20
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 33 0.20
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 33 0.20
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 33 0.20
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 33 0.20
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 33 0.20
U00064-2|AAD31934.2| 329|Caenorhabditis elegans Hypothetical pr... 31 0.60
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 31 0.79
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 30 1.4
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 30 1.4
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 30 1.4
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 3.2
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 3.2
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 29 3.2
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 29 3.2
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 4.2
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 5.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 5.6
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 28 5.6
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 28 5.6
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 28 5.6
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 28 5.6
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 28 5.6
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 5.6
Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z50872-2|CAA90755.1| 273|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF016438-14|AAB65888.1| 493|Caenorhabditis elegans Cytochrome p... 28 7.4
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 27 9.8
>AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical
protein Y22F5A.3a protein.
Length = 207
Score = 248 bits (606), Expect = 4e-66
Identities = 117/196 (59%), Positives = 151/196 (77%), Gaps = 2/196 (1%)
Frame = +2
Query: 107 LEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINAD 286
LE + ++ TD+SLESTRRM+ LCEESKEAGI+TLV LDDQGEQL+R E +D IN D
Sbjct: 11 LEAINLKMNATTDDSLESTRRMLALCEESKEAGIKTLVMLDDQGEQLERCEGALDTINQD 70
Query: 287 MREAEKNLSGMEKCCGICVLPCNKGASFKEDD--GTWKGNDDGKVVNNQPQRVMDERNGI 460
M+EAE +L GMEKCCG+CVLP NK F++ + WK +DDG V+++QP R+ + +
Sbjct: 71 MKEAEDHLKGMEKCCGLCVLPWNKTDDFEKTEFAKAWKKDDDGGVISDQP-RITVGDSSM 129
Query: 461 GPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQIDRINRKGES 640
GPQ GYI +ITNDAREDEM+EN+ QV+TM+GNLRNMA+DM +E+ NQNRQ+DRI+ K +S
Sbjct: 130 GPQGGYITKITNDAREDEMDENVQQVSTMVGNLRNMAIDMSTEVSNQNRQLDRIHDKAQS 189
Query: 641 NETRXTLANQRAHELL 688
NE R AN+RA L+
Sbjct: 190 NEVRVESANKRAKNLI 205
>AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical
protein Y22F5A.3b protein.
Length = 234
Score = 244 bits (597), Expect = 5e-65
Identities = 118/197 (59%), Positives = 151/197 (76%), Gaps = 2/197 (1%)
Frame = +2
Query: 104 ELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINA 283
EL+ L + + T ESLESTRRM+ LCEESKEAGI+TLV LDDQGEQL+R E +D IN
Sbjct: 37 ELKGLNVGIDEKTIESLESTRRMLALCEESKEAGIKTLVMLDDQGEQLERCEGALDTINQ 96
Query: 284 DMREAEKNLSGMEKCCGICVLPCNKGASFKEDD--GTWKGNDDGKVVNNQPQRVMDERNG 457
DM+EAE +L GMEKCCG+CVLP NK F++ + WK +DDG V+++QP R+ +
Sbjct: 97 DMKEAEDHLKGMEKCCGLCVLPWNKTDDFEKTEFAKAWKKDDDGGVISDQP-RITVGDSS 155
Query: 458 IGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQIDRINRKGE 637
+GPQ GYI +ITNDAREDEM+EN+ QV+TM+GNLRNMA+DM +E+ NQNRQ+DRI+ K +
Sbjct: 156 MGPQGGYITKITNDAREDEMDENVQQVSTMVGNLRNMAIDMSTEVSNQNRQLDRIHDKAQ 215
Query: 638 SNETRXTLANQRAHELL 688
SNE R AN+RA L+
Sbjct: 216 SNEVRVESANKRAKNLI 232
>U41268-1|AAA82433.2| 234|Caenorhabditis elegans Temporarily
assigned gene nameprotein 81 protein.
Length = 234
Score = 77.8 bits (183), Expect = 7e-15
Identities = 57/222 (25%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Frame = +2
Query: 62 PAAVPPAENGGPRSELEQLQMRA--GQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQ 235
P A+P E R +L+ + + A ++ +SL+S+ +M++ ++ ++T AL+DQ
Sbjct: 12 PIALPTEETVQKRIKLKMVDLDAEIAKLNVQSLDSSIQMIRDIDQMNVDAVQTTAALEDQ 71
Query: 236 GEQLDRIEEGMDQINADMREAEKNLSGMEKCCG-----ICVLPCNKGASFKED---DGTW 391
EQLD+IE + + D+ N++ ME CG I P + D +
Sbjct: 72 DEQLDKIEANLSNVIDDLNVVSHNITAMEHYCGCGFFRILRAPFKYFRKRERDIIKEEVL 131
Query: 392 KGNDDGKVVNNQPQRVMDERNGIGPQ---AGYIGRITNDAREDEMEENMGQVNTMIGNLR 562
+ K+ + +M N + ++ R+T DA EDE+E N+ Q++ + +++
Sbjct: 132 EKMTSPKLRRKEESNMMMFTNSSKRRESTGDFMKRLTCDAIEDELERNLMQIDQGLESVK 191
Query: 563 NMALDMGSELENQNRQIDRINRKGESNETRXTLANQRAHELL 688
N+A+DM +L+ Q +++RI E+N+ N + +LL
Sbjct: 192 NLAVDMHVQLKLQEPKLNRIEELTETNDFVVEGVNDKVKKLL 233
>L14710-5|AAK84538.1| 277|Caenorhabditis elegans Hypothetical
protein K02D10.5 protein.
Length = 277
Score = 64.1 bits (149), Expect = 9e-11
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Frame = +2
Query: 104 ELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINA 283
E + + + ESL+ST R + E S++ G T L +Q E+L+ E+ +D+I+
Sbjct: 35 EADYYEREIEKTLQESLDSTERSRRHLENSEKIGTSTAQQLLEQREKLENTEKNLDEIHR 94
Query: 284 DMREAEKNLSGMEKCCG----------------ICVLPCNKGASFKEDDGTWKGNDDGKV 415
+ ++NL+ ++ G +P +K AS + T + G
Sbjct: 95 TTQMTQRNLNSLKSFFGGMFKNKFTKKPQEPTETPTVPQSKSASRLSETATNLSSGGGSA 154
Query: 416 VNNQP--QRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSE 589
+ P QR + E + I +A +++++EN+ ++ + NL+ + D+G E
Sbjct: 155 TFSGPSGQRTLTESS-----RSAIKGTRWEAMDNQIDENLDMMSANLRNLQRLGADLGKE 209
Query: 590 LENQNRQIDRINRKGESNE 646
+++QN +DRI K E N+
Sbjct: 210 VDSQNEMLDRIQYKAERND 228
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 3397 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 3452
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 3397 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 3452
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 2852 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 2907
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 3397 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 3452
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 3397 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 3452
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 2852 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 2907
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 3397 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 3452
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 3397 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 3452
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 2852 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 2907
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 3397 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 3452
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 125 RAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMR 292
+ DE E +M LC + E R L ++ Q D + + +DQ++A+++
Sbjct: 3397 KISDTVDEGKELVEEVMALCADRTETLERALALMEQLTSQFDELNKWLDQMDAELQ 3452
>U00064-2|AAD31934.2| 329|Caenorhabditis elegans Hypothetical
protein ZC155.7 protein.
Length = 329
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 488 ITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQIDRINRKGESNETRXTLA 664
+ ND E E+ + VNT I L + D+ + +Q IDRI+ E R + A
Sbjct: 232 MNNDREVREREKEVMAVNTSIRELNTLFQDLSEMIVDQGSVIDRIDYNVEQTSIRVSKA 290
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 179 LCEESKEAGIR-TLVALDDQGEQLDRIEEGMDQINADMREAEKNLSGMEKCCG 334
L + +K+AG + ++ DD+ E D+ + + A+M+E +KN G+EK G
Sbjct: 586 LGDVAKKAGAKWKSMSADDKKEWNDKAAQDKARYEAEMKEYKKNGGGVEKASG 638
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 611 SVGSGSRARNPCPRPCCADSRSWCSLDPCSPPFRLHERRSLSSRYIQPAG 462
S + S R+P RP S S +L C P R+ +R + SS AG
Sbjct: 106 SFSTSSANRSPANRPSLHSSTSPVTLQRCRSPMRVPQRSTSSSHNFGAAG 155
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical
protein R11F4.3 protein.
Length = 418
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -3
Query: 386 CRRPL*TMLPCCKAARRSRNISPSRTDSSRPPACPR*SGPCPPRFCPI-VLPGRLERPEY 210
C P+ LP + + I+P+R+ + A P P PPRF + +P P
Sbjct: 118 CSSPVCNQLPLAQQRQLLTAIAPARSKTVPDLATPELPIPQPPRFAEVPPIPDAPTNPPT 177
Query: 209 ECRPPCSP 186
PP P
Sbjct: 178 TTTPPPPP 185
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 611 SVGSGSRARNPCPRPCCADSRSWCSLDPCSPPFRLHERRSLSSRYIQPAG 462
S + S R+P RP S S +L C P R+ +R + SS AG
Sbjct: 106 SFSTSSANRSPANRPSLHSSTSPVTLQRCRSPMRVPQRSTSSSHNFGAAG 155
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +2
Query: 374 EDDGTWKGNDDGKVVNNQPQRVMDERNGIGPQAGYIGRITNDARE--DEMEENMGQVNTM 547
+D+ K N + K +++ ++ + ++ +I N + DE+EEN+ +
Sbjct: 998 QDEAVAKLNKEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRS 1057
Query: 548 IGNLRNMALDMGSELENQNRQIDRINRKGESNETRXTLANQRAH 679
G++ + +L+ ID I ++ ET + H
Sbjct: 1058 RGDIEKAKRKVEGDLKVAQENIDEITKQKHDVETTLKRKEEDLH 1101
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +2
Query: 374 EDDGTWKGNDDGKVVNNQPQRVMDERNGIGPQAGYIGRITNDARE--DEMEENMGQVNTM 547
+D+ K N + K +++ ++ + ++ +I N + DE+EEN+ +
Sbjct: 998 QDEAVAKLNKEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRS 1057
Query: 548 IGNLRNMALDMGSELENQNRQIDRINRKGESNETRXTLANQRAH 679
G++ + +L+ ID I ++ ET + H
Sbjct: 1058 RGDIEKAKRKVEGDLKVAQENIDEITKQKHDVETTLKRKEEDLH 1101
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 167 RMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMREAEKNLSGMEKCC 331
R+ + EE+K T+ ++ D+GE+LD + + + ++ + + M KCC
Sbjct: 144 RVQEEVEETKMVMHNTIQSVLDRGEKLDDLVKKSENLSDQSKMFYTSARKMNKCC 198
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = -1
Query: 508 FTSVVRYPPDISSLRADPIAFIHHSLRLIVDHLTVIVALPCAVVLFERCSLVARQHADPA 329
++ V R+ P + + A + +++ +++ T I CAV L L R H DP
Sbjct: 1204 YSHVFRHAPSVRDVVACAELYAS-AMQAQIENTTAIKDALCAVFLDSLAGLTTRLHIDPV 1262
Query: 328 TFLHPGQILLGLPHVRVDLVHALLDSVQLF 239
+L V+ L+ L D VQ F
Sbjct: 1263 EVFDDALTMLHSELVKTQLLGQLSD-VQKF 1291
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 470 AGYIGRITNDAREDEMEEN------MGQVNTMIGNLRNMALDMGSELENQNRQIDRINR 628
A +I ++ +A +D ME+ M Q+ I NL+ D LE+QN +I +NR
Sbjct: 504 AEHIDQVRRNAEKDAMEQQKTYQNEMTQLKATIENLQKELSDRDILLESQNEKIGDMNR 562
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = -3
Query: 617 GRSVGSGSRARNP---CPRPCCADSRSWCSLDPCSPPFRLHERRSLSS 483
G GSG A +P C RPCC S DPC R R SS
Sbjct: 175 GSGGGSGPGADSPRIHCCRPCCPYSHHRRLCDPCYCSNRPESHRDSSS 222
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 263 GMDQINADMREAEK-NLSGMEKCCGICVLPCNK 358
G D IN D+ E + L+G CC C L C++
Sbjct: 1210 GEDHINQDIYECKTCGLTGSLCCCSECALTCHR 1242
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 263 GMDQINADMREAEK-NLSGMEKCCGICVLPCNK 358
G D IN D+ E + L+G CC C L C++
Sbjct: 1210 GEDHINQDIYECKTCGLTGSLCCCSECALTCHR 1242
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -3
Query: 575 PRPCCADSRSWCSLDPCSPPFRLHERRSLSSRYIQPAGR 459
PRPC R W C F HE +S S Y P+ R
Sbjct: 6 PRPC--QPRPWLKEQKCPTGFWCHEGQSEHSFYCCPSSR 42
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 308 DSSRPPACPR*SGPCPPRFCPIVLPGRLERPEYECRPPCSPH 183
D S PP PR SG P P LPG P P PH
Sbjct: 56 DPSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPH 97
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/41 (46%), Positives = 19/41 (46%)
Frame = -3
Query: 305 SSRPPACPR*SGPCPPRFCPIVLPGRLERPEYECRPPCSPH 183
S PP P SGP P R P P R RP RP SPH
Sbjct: 83 SGAPPGPPHPSGP-PHR--PHPHPSRRPRPTRLPRPSRSPH 120
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 476 YIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQI 613
Y+ + N+ D E + GQ+N +IG L +D+ +EN+ Q+
Sbjct: 189 YVQAVVNNENPDFSELSDGQLNILIGRL----VDLKKNVENEEAQL 230
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 137 VTDESLESTRRMMQLCEESKEAGIRTLVALDD 232
VT E L +++MM E+S G L+A+D+
Sbjct: 184 VTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDE 215
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 137 VTDESLESTRRMMQLCEESKEAGIRTLVALDD 232
VT E L +++MM E+S G L+A+D+
Sbjct: 207 VTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDE 238
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 476 YIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQI 613
Y+ + N+ D E + GQ+N +IG L +D+ +EN+ Q+
Sbjct: 189 YVQAVVNNENPDFSELSDGQLNILIGRL----VDLKKNVENEEAQL 230
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 476 YIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQI 613
Y+ + N+ D E + GQ+N +IG L +D+ +EN+ Q+
Sbjct: 189 YVQAVVNNENPDFSELSDGQLNILIGRL----VDLKKNVENEEAQL 230
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
Frame = -3
Query: 311 TDSSRPPAC--PR*SGPCPPRFCPIVLPGRLER-----PEYECRPPC 192
T S+R P C PR PCP RFC P P +CR PC
Sbjct: 1197 TKSTRVPNCDDPR---PCPTRFCAEQCPYGFNSDNEGCPICDCRSPC 1240
>Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical
protein C01A2.4 protein.
Length = 207
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 104 ELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVA 223
ELE+ R + T+ LES RR M E+ E I+ L A
Sbjct: 11 ELERANKRELRKTNRDLESDRRQMDRREKELEQEIKKLAA 50
>Z50872-2|CAA90755.1| 273|Caenorhabditis elegans Hypothetical
protein C05D12.4 protein.
Length = 273
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/92 (19%), Positives = 39/92 (42%)
Frame = +2
Query: 374 EDDGTWKGNDDGKVVNNQPQRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIG 553
E D + N+ +N ++ D + I + ++ DA ++++EEN +
Sbjct: 77 EKDAVIEKNNHVIAINGA--KIEDNKKRIQEEMWKKVKVLEDAFDEKVEENNEVIKNQKE 134
Query: 554 NLRNMALDMGSELENQNRQIDRINRKGESNET 649
++ M + E + +IN+K + ET
Sbjct: 135 SIDKMRISRTETSEEHKELVKKINQKMKDTET 166
>AF016438-14|AAB65888.1| 493|Caenorhabditis elegans Cytochrome p450
family protein 33C4 protein.
Length = 493
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 272 GPCPPRFCPIVLPGRLERPEYECRPPCSPHIVASYALWTPTT 147
GP P F +L L +P YEC C+ Y W T
Sbjct: 28 GPIPLPFMGNILTMLLNKPGYECFRNCTKKYGDVYTFWMGKT 69
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +2
Query: 110 EQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADM 289
E +++R G E++E + S+EAG R + + E++ ++EE + + ++
Sbjct: 571 ENVKLRKGMA--EAIEKIEEFKRNWHSSREAGERLQLEAKENEEKVLKVEEELQEKRLEV 628
Query: 290 REAEK 304
E E+
Sbjct: 629 LEKEE 633
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 246 WTESRRAWTRSTRTCGRPRRICPGWRNVAGSACCLATREHRSKRTTA 386
W TR T R GWRN A +RE + TTA
Sbjct: 259 WRNGANGTTRDTSRGFTQRPTTAGWRNGANGTTIDTSREFTQRPTTA 305
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 246 WTESRRAWTRSTRTCGRPRRICPGWRNVAGSACCLATREHRSKRTTA 386
W TR T R GWRN A +RE + TTA
Sbjct: 403 WRNGANGTTRDTSRGFTQRPTTAGWRNGANGTTIDTSREFTQRPTTA 449
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,366,533
Number of Sequences: 27780
Number of extensions: 377380
Number of successful extensions: 1661
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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