BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0650 (700 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 25 0.91 AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 2.1 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.8 AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 21 8.5 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 24.6 bits (51), Expect = 0.91 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = +2 Query: 440 MDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTM 547 M N Q + +TND R D+M G++N++ Sbjct: 1 MLSNNSSMTQTELLQELTNDCRYDKMTRPPGEINSI 36 >AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase beta-3 protein. Length = 832 Score = 23.4 bits (48), Expect = 2.1 Identities = 13/61 (21%), Positives = 31/61 (50%) Frame = +2 Query: 137 VTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMREAEKNLSG 316 + D S+ R + L + ++ +ALD + + ++EE M +++ +M+ ++ L Sbjct: 340 INDLSMHDFSRDLMLAGTQQSVELK--LALDQEQLKSKKLEESMRKLDEEMKRTDELLYQ 397 Query: 317 M 319 M Sbjct: 398 M 398 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 23.0 bits (47), Expect = 2.8 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -2 Query: 165 LVDSNDSSVT*PARICSCSSSLRGPPFSAGGTAAGXP 55 +V++N S P + SSS P + G AAG P Sbjct: 504 VVETNSSPSPNPRIASAPSSSTSSSPPAKGAAAAGQP 540 >AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha protein precursor protein. Length = 153 Score = 21.4 bits (43), Expect = 8.5 Identities = 8/21 (38%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Frame = -3 Query: 218 PEYECRPPCSPHI-VASYALW 159 P Y CR CS ++ V+ +W Sbjct: 49 PSYACRGRCSSYLQVSGSKIW 69 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 196,020 Number of Sequences: 438 Number of extensions: 4415 Number of successful extensions: 11 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21439440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -