Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0650
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g61210.1 68418.m07678 SNAP25 homologous protein SNAP33 (SNAP3... 75 3e-14
At1g13890.1 68414.m01630 SNAP25 homologous protein, putative / s... 71 6e-13
At5g07880.1 68418.m00908 SNAP25 homologous protein, putative / s... 64 1e-10
At3g28770.1 68416.m03591 expressed protein 32 0.42
At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrog... 32 0.42
At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrog... 32 0.42
At5g01230.1 68418.m00029 FtsJ-like methyltransferase family prot... 31 0.97
At5g41140.1 68418.m05001 expressed protein 30 1.3
At5g06670.1 68418.m00753 kinesin motor protein-related 30 1.3
At4g26630.1 68417.m03837 expressed protein 30 1.3
At1g20230.1 68414.m02527 pentatricopeptide (PPR) repeat-containi... 30 1.7
At1g78150.1 68414.m09107 expressed protein 29 3.0
At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fruc... 29 3.0
At1g49320.1 68414.m05528 BURP domain-containing protein similari... 29 3.0
At4g17780.1 68417.m02653 F-box family protein contains F-box dom... 29 3.9
At2g37820.1 68415.m04643 DC1 domain-containing protein contains ... 29 3.9
At5g11120.1 68418.m01298 hypothetical protein 28 5.2
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 28 5.2
At1g63600.1 68414.m07189 protein kinase-related low similarity t... 28 5.2
At5g26980.1 68418.m03219 syntaxin 41 (SYP41) / TLG2a identical t... 28 6.8
At3g02050.1 68416.m00168 potassium transporter (KUP3) nearly ide... 28 6.8
At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR... 28 6.8
At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR... 28 6.8
At5g60070.1 68418.m07532 ankyrin repeat family protein contains ... 27 9.0
At5g35210.2 68418.m04175 peptidase M50 family protein / sterol-r... 27 9.0
At5g35210.1 68418.m04174 peptidase M50 family protein / sterol-r... 27 9.0
At5g26594.1 68418.m03154 two-component responsive regulator fami... 27 9.0
At3g56010.1 68416.m06223 expressed protein 27 9.0
At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containi... 27 9.0
At2g31100.1 68415.m03798 lipase, putative similar to lipase [Dia... 27 9.0
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 27 9.0
At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD fin... 27 9.0
At1g76850.1 68414.m08943 expressed protein 27 9.0
>At5g61210.1 68418.m07678 SNAP25 homologous protein SNAP33 (SNAP33)
(SNAP33B) / synaptosomal-associated protein SNAP25-like
1 / snap25a identical to SNAP25 homologous protein
SNAP33 (AtSNAP33) (Synaptosomal-associated protein
SNAP25-like 1) (SNAP-25 like protein 1) (Snap25a)
(Swiss-Prot:Q9S7P9) [Arabidopsis thaliana]
Length = 300
Score = 75.4 bits (177), Expect = 3e-14
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 10/212 (4%)
Frame = +2
Query: 83 ENGGPRSE-LEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIE 259
++GG ++ +++L+ A +E+ +S + +++ E+ + RTLV L DQGEQ+ R
Sbjct: 89 DSGGIENQSVQELEGYAVYKAEETTKSVQGCLKVAEDIRSDATRTLVMLHDQGEQITRTH 148
Query: 260 EGMDQINADMREAEK---NLSGM--EKCCGICVLPCNKGASFKEDDGTWKGNDDGKV--- 415
+I+ D+ EK +L GM + P N ++D T + N K
Sbjct: 149 HKAVEIDHDLSRGEKLLGSLGGMFSKTWKPKKTRPINGPVVTRDDSPTRRVNHLEKREKL 208
Query: 416 -VNNQPQRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSEL 592
+N+ P+ R + A R+ + + + ++ + ++ ++G L+NMA+DMGSE+
Sbjct: 209 GLNSAPRGQSRTREPLPESADAYQRV--EMEKAKQDDGLSDLSDILGELKNMAVDMGSEI 266
Query: 593 ENQNRQIDRINRKGESNETRXTLANQRAHELL 688
E QN+ +D ++ + R +NQR LL
Sbjct: 267 EKQNKGLDHLHDDVDELNFRVQQSNQRGRRLL 298
>At1g13890.1 68414.m01630 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP30) identical to SP|Q9LMG8 Putative SNAP25
homologous protein SNAP30 (AtSNAP30)
(Synaptosomal-associated protein SNAP25-like 3)
{Arabidopsis thaliana}; similar to SP|Q9S7P9 SNAP25
homologous protein SNAP33 (AtSNAP33)
(Synaptosomal-associated protein SNAP25-like 1) (SNAP-25
like protein 1) (Snap25a) {Arabidopsis thaliana};
contains Pfam profile: PF05739 SNARE domain
Length = 263
Score = 71.3 bits (167), Expect = 6e-13
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 13/215 (6%)
Frame = +2
Query: 83 ENGGPRSEL-EQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIE 259
++GG +S+ E+L+ A +E+ + +++ E+ + G RTL L QGEQ++R
Sbjct: 54 DSGGLQSQTTEELEKYAVYKAEETTKGVNNCLKIAEDIRSDGARTLEMLHQQGEQINRTH 113
Query: 260 EGMDQINADMREAEKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGND--DGKVVNNQPQ 433
E ++ D+ EK L+ + G+ P K K G D K N++ +
Sbjct: 114 EMAVDMDKDLSRGEKLLNNLG---GMFSKPW-KPKKTKNITGPMITPDKPSKKSENHKEE 169
Query: 434 RVMDERNGIGPQAGY-----IGRITNDAREDEME-----ENMGQVNTMIGNLRNMALDMG 583
R E+ G+G + + + TN ++ E E + + ++ ++G+L++MA+DMG
Sbjct: 170 R---EKLGLGAKGRSSSQPALDQPTNALQKVEQEKAKQDDGLSDLSDILGDLKSMAVDMG 226
Query: 584 SELENQNRQIDRINRKGESNETRXTLANQRAHELL 688
SE++ QN+ +D + + +R ANQRA LL
Sbjct: 227 SEIDKQNKALDHLGDDVDELNSRVQGANQRARHLL 261
>At5g07880.1 68418.m00908 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25
homologous protein SNAP29
(AtSNAP29)(Synaptosomal-associated protein SNAP25-like
2) [Arabidopsis thaliana]; contains Pfam profile:
PF05739 SNARE domain
Length = 251
Score = 63.7 bits (148), Expect = 1e-10
Identities = 44/206 (21%), Positives = 102/206 (49%), Gaps = 4/206 (1%)
Frame = +2
Query: 86 NGGPRSE-LEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEE 262
+GG ++ +++L+ A ++E+ ++ + +++ EE + +TLV L++QG+Q+ R +
Sbjct: 46 SGGKENQTVQELESYAVYNSEETTKTVQGCLKVAEEIRCDASKTLVMLNEQGDQITRTHQ 105
Query: 263 GMDQINADMREAEKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGNDDGKVVNNQPQRVM 442
++ + EK L + P K S T + KV++ + + +
Sbjct: 106 KTVDLDHHLSRGEKILGRLGGVFSRTWKP-KKSRSITGPVITKGDSPKRKVIDLKTREKL 164
Query: 443 DERNGIGPQAGYIGRITNDAREDEM---EENMGQVNTMIGNLRNMALDMGSELENQNRQI 613
+ P++ + + ++ ++ +E + ++ ++G L+NMA+DMG+ +E Q ++
Sbjct: 165 GLNPSLKPKSKTLPEAVDAYQKTQIAKQDEALTDLSALLGELKNMAVDMGTAIERQTNEL 224
Query: 614 DRINRKGESNETRXTLANQRAHELLK 691
D + + R +NQRA LL+
Sbjct: 225 DHLQDNADELNYRVKQSNQRARYLLR 250
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.9 bits (69), Expect = 0.42
Identities = 31/140 (22%), Positives = 62/140 (44%)
Frame = +2
Query: 233 QGEQLDRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGNDDGK 412
+G + D+IEEGM+ +E+ K+ + + G +G+ + T K + D K
Sbjct: 1692 EGSKDDKIEEGMEGKENSTKESSKD-GKINEIHGDKEATMEEGSKDGGTNSTGKDSKDSK 1750
Query: 413 VVNNQPQRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSEL 592
V + V D+ + G I I N+ +ED +++N+ ++ GN ++ SE
Sbjct: 1751 SV--EINGVKDDSLKDDSKNGDINEI-NNGKEDSVKDNVTEIQ---GNDNSLTNSTSSEP 1804
Query: 593 ENQNRQIDRINRKGESNETR 652
++ + K + E +
Sbjct: 1805 NGDKLDTNKDSMKNNTMEAQ 1824
>At3g06850.2 68416.m00813 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -3
Query: 551 RSWCSLDPCSPPFRLHERRSLSSRYIQPAGRSHCVHP 441
R + S CSPPFR+ E S SS PA R VHP
Sbjct: 14 RPFSSSSVCSPPFRVPEYLSQSSS--SPASRPFFVHP 48
>At3g06850.1 68416.m00812 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -3
Query: 551 RSWCSLDPCSPPFRLHERRSLSSRYIQPAGRSHCVHP 441
R + S CSPPFR+ E S SS PA R VHP
Sbjct: 14 RPFSSSSVCSPPFRVPEYLSQSSS--SPASRPFFVHP 48
>At5g01230.1 68418.m00029 FtsJ-like methyltransferase family protein
contains Pfam profile: PF01728 FtsJ-like
methyltransferase
Length = 309
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -3
Query: 620 CGRSVGSGSRARNPCPRPCCADSRSWCSLDPCSPPFRLHERRSL 489
CG G S P PR AD S+ SLDP PP +R+L
Sbjct: 256 CGDLTGYDSDRSYPLPRE--ADGSSYQSLDPIQPPIAPPYKRAL 297
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/89 (23%), Positives = 44/89 (49%)
Frame = +2
Query: 416 VNNQPQRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELE 595
++ + QR++DE+ + A T A D ++ ++ + I NLR + + SELE
Sbjct: 761 LSEELQRIIDEKEAV-ITALKSQLETAIAPCDNLKHSLSNNESEIENLRKQVVQVRSELE 819
Query: 596 NQNRQIDRINRKGESNETRXTLANQRAHE 682
+ ++ + + E++ T QR++E
Sbjct: 820 KKEEEMANLENR-EASADNITKTEQRSNE 847
>At5g06670.1 68418.m00753 kinesin motor protein-related
Length = 992
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 104 ELEQLQMRAGQVTDESLESTRRMMQLCEES---KEAGIRTLVALDDQGEQLDRIEEGMDQ 274
E+E+L+++A ++++ + + R +L EES KE + L E++ R+ ++
Sbjct: 809 EIEELKLKAAELSELNEQLEIRNKKLAEESSYAKELASAAAIELKALSEEIARLMNHNER 868
Query: 275 INADMREAEKN 307
+ AD+ +K+
Sbjct: 869 LAADLAAVQKS 879
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +2
Query: 362 ASFKEDDGTWKGNDDGKVVNNQPQRVMDERNGIGPQAGYIGRITNDAREDEMEENMGQVN 541
A+ +D T ++G +V+ MDE+ G + + + +ED+ E +V
Sbjct: 170 ANGTKDGNTGDIKEEGTLVDEDKGTDMDEKVENGDENKQVENVEGKEKEDKEENKTKEVE 229
Query: 542 TMIGNLRNMALD---MGSELENQNRQIDRINRKGESNE 646
+ ++ GSE EN N +++ + K + E
Sbjct: 230 AAKAEVDESKVEDEKEGSEDENDNEKVESKDAKEDEKE 267
>At1g20230.1 68414.m02527 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 760
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 206 IRTLVALDDQGEQLDRIEEGMDQINADMREA 298
+ TL+A D Q+D+I E MD+I+ +MR++
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
>At1g78150.1 68414.m09107 expressed protein
Length = 274
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 131 GQVTDESLESTRRMMQLCE-ESKE---AGIRTLVALDDQGEQLDRIEEGMDQINADMREA 298
GQVTDE +ES R E + KE +GI + DD E L ++ ++ I+
Sbjct: 53 GQVTDEEVESLNRRKPCSEHKMKEITGSGIFSRNEKDDASEPLPVYQQAVNGISQISFGE 112
Query: 299 EKNLS 313
E+NLS
Sbjct: 113 EENLS 117
>At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) /
beta-fructofuranosidase / invertase, vacuolar identical
to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis
thaliana]; supported by full-length cDNA GI:14517549;
identical to cDNA Beta-fructosidase GI:3115854
Length = 648
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 347 PCNKGASFKEDDGTWKGNDDGKV 415
P G S K +DG W +DDGKV
Sbjct: 70 PRMAGVSEKSNDGVWISSDDGKV 92
>At1g49320.1 68414.m05528 BURP domain-containing protein similarity
to SP|Q08298 Dehydration-responsive protein RD22
precursor {Arabidopsis thaliana}; contains Pfam profile
PF03181: BURP domain
Length = 280
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 532 THVLLHFVFTSVVRYPPDISSLRADPIAFIHHSLRLIVDHLTV 404
T +L++F + + PP ++ +AD I F L ++DH ++
Sbjct: 68 TKLLIYFYKNDLQKLPPLLTRQQADLIPFTKSKLDFLLDHFSI 110
>At4g17780.1 68417.m02653 F-box family protein contains F-box domain
Pfam:PF00646
Length = 347
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +3
Query: 96 LAASSSSCKCEPVRLPMSRWSPQGV*CNYVR-RARRPAFVLWSL*TTRENNWTESRRAWT 272
LAA + C EP LP S Y+ A +P+F L E W + WT
Sbjct: 63 LAAYNCKCGWEPRLLPGSSQCKGNEEIVYLHCNAAQPSFTCDGLVCILEPRWIDVLNPWT 122
Query: 273 RSTRTCG 293
R R G
Sbjct: 123 RQLRRYG 129
>At2g37820.1 68415.m04643 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 290
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 629 CD*CGRSVGSGSRARNPCPRPCCADSRSWCSLDPCSPPFRLHERRSLS 486
CD C ++ GSG R C PC D +C+ P + P +H + LS
Sbjct: 31 CDGC-KTYGSGKTYR--C-EPCNYDLHEYCATCPLTLPTFIHPQHELS 74
>At5g11120.1 68418.m01298 hypothetical protein
Length = 162
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 215 LVALDDQGEQLDRIEEGMDQINADMREA-EKNL 310
+V +++ E ++RIEEG+ A +R+A EKNL
Sbjct: 79 VVVVEEVDEAVERIEEGLAMARAAIRKAGEKNL 111
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 350 KAARRSRNISPSRTDSSRPPACPR 279
+A + +++SPS TD + PP C R
Sbjct: 81 RARLKQQSLSPSSTDQATPPECDR 104
>At1g63600.1 68414.m07189 protein kinase-related low similarity to
receptor-like protein kinase 5 [Arabidopsis thaliana]
GI:13506747; contains Pfam profile: PF01657 Domain of
unknown function DUF26
Length = 302
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = -3
Query: 428 ADC*PPYRHR-CPSMCRRPL*TMLPCCKAARRSRNISPS---RTD----SSRPPACPR*S 273
A C P R C + + + ML CC +R ++ +P R + SS PP P
Sbjct: 205 AQCSPDLDPRNCTTCLKLAVQEMLECCNQSRWAQIFTPKCLLRYEATALSSPPPPYPSPP 264
Query: 272 GPCPPRFCPIV-LPGRLERPE 213
P P F P++ P +RP+
Sbjct: 265 PPSSPLFSPLLPSPPLFKRPQ 285
>At5g26980.1 68418.m03219 syntaxin 41 (SYP41) / TLG2a identical to
SP|O65359 Syntaxin 41 (AtSYP41) (AtTLG2a) {Arabidopsis
thaliana}
Length = 322
Score = 27.9 bits (59), Expect = 6.8
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Frame = +2
Query: 107 LEQLQMRAGQVTDE-SLESTRRMMQLCEESKEAG--IRTLVALD-DQGEQLDRIEEGMDQ 274
L + QM + ++E S+E + + Q+ E + ++ L AL DQG +DRI+ ++
Sbjct: 214 LNEHQMSKIKKSEEVSVEREKEIQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIEN 273
Query: 275 INADMREAEKNL---------SGMEKCCGICVLPC 352
+ + + K L GM KC + V+ C
Sbjct: 274 VATTVEDGLKQLQKAERTQRHGGMVKCASVLVILC 308
>At3g02050.1 68416.m00168 potassium transporter (KUP3) nearly
identical to potassium transporter KUP3p [Arabidopsis
thaliana] gi|6742169|gb|AAF19432; similar to tiny root
hair 1 protein [Arabidopsis thaliana]
gi|11181958|emb|CAC16137; KUP/HAK/KT Transporter family
member, PMID:11500563
Length = 789
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 160 GLQRLIGNLTGSHLQLLELAARPAIFGRRYCCRHXLLFLLAP 35
GLQ N+T L +L +F ++C H + F+ AP
Sbjct: 185 GLQATEKNVTDGELLVLACVILVGLFALQHCGTHRVAFMFAP 226
>At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 683 ARERAGSPEXSSFHLTLPCD*CGRSVGSGSRARNPCPRPCCADSRS 546
+R R+ SP+ S + P RS G S++R+P PR + SRS
Sbjct: 229 SRSRSRSPKAKSSRRS-PAKSTSRSPGPRSKSRSPSPRRSRSRSRS 273
>At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 683 ARERAGSPEXSSFHLTLPCD*CGRSVGSGSRARNPCPRPCCADSRS 546
+R R+ SP+ S + P RS G S++R+P PR + SRS
Sbjct: 229 SRSRSRSPKAKSSRRS-PAKSTSRSPGPRSKSRSPSPRRSRSRSRS 273
>At5g60070.1 68418.m07532 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 548
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -1
Query: 409 TVIVALPCAVVLFERCSLVARQHADPATFLHPGQIL--LGLPHVRVDLVHALLDSVQLF- 239
T +VA+ A V F V Q+AD + L PGQ L + + + DS+ LF
Sbjct: 370 TTVVAVLIATVAFAAIFTVPGQYADELSSLLPGQSLGEANIADRPAFAIFFIFDSIALFI 429
Query: 238 SLVV 227
SL V
Sbjct: 430 SLAV 433
>At5g35210.2 68418.m04175 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1409
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 EEGMDQINADMREAEKN-LSGMEKCCGICVLPCNKGASF 370
+ G+D N ++ A ++ +E CGIC+LP N G ++
Sbjct: 1083 DTGVDFRNQNILLAGRSDKPSLEPVCGICLLPYNPGLTY 1121
>At5g35210.1 68418.m04174 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1576
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 EEGMDQINADMREAEKN-LSGMEKCCGICVLPCNKGASF 370
+ G+D N ++ A ++ +E CGIC+LP N G ++
Sbjct: 1083 DTGVDFRNQNILLAGRSDKPSLEPVCGICLLPYNPGLTY 1121
>At5g26594.1 68418.m03154 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 139
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 152 LESTRRMMQLCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMREAEKNLSGMEK 325
+++T+R+ ++ ESK AG+ T ++GE+ + +E G++ K LS + K
Sbjct: 78 IQATKRLREMGIESKIAGVTTRA---NEGEKKEFMEAGLNDFQEKPLTISKLLSILHK 132
>At3g56010.1 68416.m06223 expressed protein
Length = 201
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 240 SPWSSRATRVRMPASLLSSHSCIIRLVDSNDSSVT*PARICSCSSSLRGPPFS 82
SP++S + SLL ++ +D+ND+SVT + S SSS P S
Sbjct: 26 SPFASYISLNSSRRSLLCKRRLVVSCLDTNDNSVT-TTSVDSSSSSDSNKPVS 77
>At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1077
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 101 SELEQLQMRAGQVTDESLESTRRMMQLCEESKEAGIRTL 217
SE+ ++ Q DE LES +++ EES E G+ L
Sbjct: 614 SEIVAIENEVYQFDDEKLESVLSLLRSDEESLEFGLNAL 652
>At2g31100.1 68415.m03798 lipase, putative similar to lipase
[Dianthus caryophyllus] GI:4103627; contains Pfam
profile PF01764: Lipase (class 3)
Length = 355
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 272 QINADMREAEKNLSGMEK---CCGICVLPCNKGASFKEDDGTWKGNDDGKVVNNQPQRVM 442
+IN D+ K L +E G + NKG + DDGTWK N D + +
Sbjct: 289 EINRDIALVNKGLDALEDKYLVPGHWWVLENKGM-VQSDDGTWKLNGDRSKKKQEEEDEK 347
Query: 443 DERN 454
+E N
Sbjct: 348 EENN 351
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -3
Query: 416 PPYRHRCPSMCRRPL*TMLPCCKAARRSRNISPSRTDSSRPPACPR*SGPCPP 258
P RHR P+ R + P ARR R+ P+R S P R P PP
Sbjct: 336 PARRHRSPTPPARQRRSPSP---PARRHRSPPPARRRRSPSPPARRRRSPSPP 385
>At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD finger
protein-related contains Pfam profiles PF03107: DC1
domain, weak hit to PF00628: PHD-finger
Length = 513
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 227 DDQGEQLDRIEEGMD---QINADMREAEKNLSGMEKCCGICVLPCNK 358
D++ E +RI +G+ ++ ++G EK C CVLP N+
Sbjct: 215 DEEVEPFERISDGIILHFSHGCQLKLTTYEVNGEEKFCQACVLPINE 261
>At1g76850.1 68414.m08943 expressed protein
Length = 1090
Score = 27.5 bits (58), Expect = 9.0
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +2
Query: 227 DDQGE-QLDRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGN- 400
D++ E +L I G D + + RE + G + G V KG + KEDDG W G
Sbjct: 75 DEESEVELLSISSGDDDLERE-REIGGSSGGAGRGRGSDVR--EKGRARKEDDGAWDGGE 131
Query: 401 -DDGKVVNNQ--PQRVMDER 451
D K VN +RV D R
Sbjct: 132 PDCWKRVNEAELARRVRDMR 151
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,780,886
Number of Sequences: 28952
Number of extensions: 361658
Number of successful extensions: 1461
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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