BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0649 (569 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q5DID3-2 Cluster: Isoform 2 of Q5DID3 ; n=5; Eutheria|R... 33 3.6 UniRef50_Q8LLE5 Cluster: Coiled-coil protein; n=2; core eudicoty... 33 3.6 UniRef50_Q6EM02 Cluster: Beta-galactosidase; n=7; Magnoliophyta|... 33 3.6 >UniRef50_Q5DID3-2 Cluster: Isoform 2 of Q5DID3 ; n=5; Eutheria|Rep: Isoform 2 of Q5DID3 - Mus musculus (Mouse) Length = 1348 Score = 33.5 bits (73), Expect = 3.6 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = -2 Query: 142 PFSSQTSDTTSVRL*SASTGITMNGYKTLNKNSKENHPKT 23 P + S TT V + +ASTGIT G +TL ++ HP++ Sbjct: 551 PTGDELSVTTKVTVPAASTGITTFGPETLTESLSSKHPRS 590 >UniRef50_Q8LLE5 Cluster: Coiled-coil protein; n=2; core eudicotyledons|Rep: Coiled-coil protein - Solanum lycopersicum (Tomato) (Lycopersicon esculentum) Length = 582 Score = 33.5 bits (73), Expect = 3.6 Identities = 20/47 (42%), Positives = 25/47 (53%) Frame = -2 Query: 145 SPFSSQTSDTTSVRL*SASTGITMNGYKTLNKNSKENHPKTYTIDDK 5 SP SS +S T+S ASTG + NG+ L SK P I+DK Sbjct: 538 SPASSSSSSTSSTT--QASTGKSKNGFGKLFSRSKSGVPTLKVIEDK 582 >UniRef50_Q6EM02 Cluster: Beta-galactosidase; n=7; Magnoliophyta|Rep: Beta-galactosidase - Sandersonia aurantiaca (Christmas-bells) (Chinese-lantern lily) Length = 826 Score = 33.5 bits (73), Expect = 3.6 Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 2/89 (2%) Frame = -3 Query: 462 FDSXLPLXXYNFXLPXSFKHFTNV*RLIALKVL*YCT-RLVFQYSAVITMRTNLLSNVGQ 286 +D PL Y + H T++ + I L C LV Y V ++ N SNV + Sbjct: 311 YDYDAPLDEYGMLRQPKYGHLTDLHKAIKL-----CEPALVSGYPVVTSLGNNQESNVFR 365 Query: 285 VTSGLCSAQQFSLLVVYD-RYFCVRTFEG 202 SG C+A L YD +Y+ TF G Sbjct: 366 SNSGACAA----FLANYDTKYYATVTFNG 390 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 476,002,722 Number of Sequences: 1657284 Number of extensions: 8307868 Number of successful extensions: 19524 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 19070 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19518 length of database: 575,637,011 effective HSP length: 96 effective length of database: 416,537,747 effective search space used: 38738010471 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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