BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0649 (569 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p pro... 30 1.9 AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-P... 30 1.9 AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like ... 30 2.5 AY061576-1|AAL29124.1| 987|Drosophila melanogaster SD02803p pro... 29 5.8 >AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p protein. Length = 664 Score = 30.3 bits (65), Expect = 1.9 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -3 Query: 240 VYDRYFCVRTFEGHTVV--EKESFEPNKCLSKCAVPSAHKQATPRLCGCSQHP 88 +Y FC RTF+ H + K+ PN + K + PS+ +T HP Sbjct: 562 LYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQPSSSITSTAAPLAHPNHP 614 >AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-PA protein. Length = 664 Score = 30.3 bits (65), Expect = 1.9 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -3 Query: 240 VYDRYFCVRTFEGHTVV--EKESFEPNKCLSKCAVPSAHKQATPRLCGCSQHP 88 +Y FC RTF+ H + K+ PN + K + PS+ +T HP Sbjct: 562 LYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQPSSSITSTAAPLAHPNHP 614 >AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like protein protein. Length = 737 Score = 29.9 bits (64), Expect = 2.5 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 117 VSLVCELKGLRTWKDICLVRNSLFQQQCVLQ 209 +S+V L+G W+D C R +LF C+ + Sbjct: 306 LSIVGLLEGFERWRDWCPERTTLFSNHCIFR 336 >AY061576-1|AAL29124.1| 987|Drosophila melanogaster SD02803p protein. Length = 987 Score = 28.7 bits (61), Expect = 5.8 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -3 Query: 312 TNLLSNVGQVTSGLCSAQQFSLLVVYDRYFCVRTFEGHTVVEK 184 T LL + +C+ + FSLL+ + + +C F HT +EK Sbjct: 373 TALLETKHTIQQAICATEYFSLLLDFFKQYCWNNFL-HTEMEK 414 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,649,670 Number of Sequences: 53049 Number of extensions: 405116 Number of successful extensions: 1114 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1114 length of database: 24,988,368 effective HSP length: 81 effective length of database: 20,691,399 effective search space used: 2234671092 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -