Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0649
         (569 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p pro...    30   1.9  
AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-P...    30   1.9  
AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like ...    30   2.5  
AY061576-1|AAL29124.1|  987|Drosophila melanogaster SD02803p pro...    29   5.8  

>AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p
           protein.
          Length = 664

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -3

Query: 240 VYDRYFCVRTFEGHTVV--EKESFEPNKCLSKCAVPSAHKQATPRLCGCSQHP 88
           +Y   FC RTF+ H  +   K+   PN  + K + PS+   +T        HP
Sbjct: 562 LYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQPSSSITSTAAPLAHPNHP 614


>AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-PA
           protein.
          Length = 664

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -3

Query: 240 VYDRYFCVRTFEGHTVV--EKESFEPNKCLSKCAVPSAHKQATPRLCGCSQHP 88
           +Y   FC RTF+ H  +   K+   PN  + K + PS+   +T        HP
Sbjct: 562 LYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQPSSSITSTAAPLAHPNHP 614


>AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like
           protein protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 117 VSLVCELKGLRTWKDICLVRNSLFQQQCVLQ 209
           +S+V  L+G   W+D C  R +LF   C+ +
Sbjct: 306 LSIVGLLEGFERWRDWCPERTTLFSNHCIFR 336


>AY061576-1|AAL29124.1|  987|Drosophila melanogaster SD02803p
           protein.
          Length = 987

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 312 TNLLSNVGQVTSGLCSAQQFSLLVVYDRYFCVRTFEGHTVVEK 184
           T LL     +   +C+ + FSLL+ + + +C   F  HT +EK
Sbjct: 373 TALLETKHTIQQAICATEYFSLLLDFFKQYCWNNFL-HTEMEK 414


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,649,670
Number of Sequences: 53049
Number of extensions: 405116
Number of successful extensions: 1114
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)