Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0648
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 31 0.76
SB_37386| Best HMM Match : DUF164 (HMM E-Value=0.46) 31 1.00
SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1) 31 1.00
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7) 31 1.3
SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 3.0
SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09) 29 3.0
SB_49487| Best HMM Match : Zip (HMM E-Value=0.014) 29 4.0
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 29 5.3
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 29 5.3
SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 28 7.0
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 28 7.0
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_9721| Best HMM Match : Filament (HMM E-Value=0.2) 28 7.0
SB_6634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_20535| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10) 28 9.3
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 28 9.3
>SB_1285| Best HMM Match : SET (HMM E-Value=0.011)
Length = 829
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 257 RKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKNDI 412
+K+ V + EE+ R LV L GPP + T+ P E ++S VK ++
Sbjct: 554 KKYSVAEFREELVRQLVGLEEFGPPPAHKPPTRAPNQFETVHMPMMSDVKRNL 606
>SB_37386| Best HMM Match : DUF164 (HMM E-Value=0.46)
Length = 189
Score = 31.1 bits (67), Expect = 1.00
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 60 IPDKVPEAEDKPLNVVENLSSEQELID-QANTIKDIDNSLRANKKEVVDIPVKV-IVEEI 233
+ +K+ AE + + ++L+ ++ + Q + ++D + L + +K++ D+ V E
Sbjct: 26 LTEKLDTAETSLVFMKKDLARKEGIYKAQQDELEDAEKQLASTRKKLQDMKASYEAVNEE 85
Query: 234 KPSLKSDLESLKCRM 278
LK+DLES+K R+
Sbjct: 86 NEKLKNDLESIKRRI 100
>SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1)
Length = 363
Score = 31.1 bits (67), Expect = 1.00
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 383 KIVSSVKNDINTAEIALRQGFQEVSDGIGKW----YARTEQINELQASLQHFQENFGAQI 550
K S N+ + ++ GF +V G G W Y E +N Q +L F+++ A +
Sbjct: 43 KFTGSCTNESDVGQMRFDNGFLQVCTGTGGWRSMQYQGCEPLNVAQRNLDAFKKSSFAVL 102
Query: 551 QKLNETL 571
+ N+ L
Sbjct: 103 FQFNKNL 109
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 31.1 bits (67), Expect = 1.00
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +3
Query: 66 DKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSL 245
+KV E+ D + +EN EL +Q IK+ + L+ +KE+ + K+I E+ L
Sbjct: 603 EKVNESRDDEITELEN-----ELEEQREIIKENEEKLKEKEKEIEKLKKKII--ELSDKL 655
Query: 246 KSDLESLKCRMKMR 287
K D+E+ + +++ +
Sbjct: 656 K-DMETSRNKVETK 668
>SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7)
Length = 149
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 57 SIPDKVPEAEDKPLNVVENLSSEQELIDQ-ANTIKDIDNSLRANKKEVVDIPVKVIVEEI 233
SIP P+ + K LN VEN++ +E ++ A+ + D+ N + + K E V V+ +
Sbjct: 74 SIPLAKPQKQQKVLNAVENINWPEEKKERFADVLNDVHN-ISSEKSEEEGDGVVFFVKSL 132
Query: 234 KPSLKSDLESLK 269
K + +++L LK
Sbjct: 133 KWA-RNELRILK 143
>SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 257 RKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKND 409
+K+ V + EE+ R LV L GPP + T+ P E ++S VK +
Sbjct: 554 KKYSVAEFREELVRQLVGLEEFGPPPAHKPPTRAPNQFETVHMPMMSDVKRN 605
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 320 PGPPQHQEHETQNPEHHEDAEKIVSSVKN---DINTAEIALRQGFQEVSDGIGKWYARTE 490
P PP H + E H E E+I S K+ D+ A+ L++ +++ + +G Y R
Sbjct: 282 PNPPPHLDEEKIKQLHEELKEEIKSMAKDSEKDLEDAKKDLKEEIEQIKEEVG--YLRYM 339
Query: 491 QINEL 505
+ +L
Sbjct: 340 EAKQL 344
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 29.5 bits (63), Expect = 3.0
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Frame = +2
Query: 278 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVS 457
ENE+I+ V LR+ Q +E + E+ D E+ + S+K + AE + + ++
Sbjct: 259 ENEKIRLEHV-LRDR-ERQLKEKDRIIEENKADYEEDLKSLKELLRKAEEKSKSKMKAIN 316
Query: 458 DG----IGKWYARTEQINELQASLQHFQENFGAQIQKLNETL 571
D + + +EQI+ L+A+LQH QE ++++LN +L
Sbjct: 317 DYEIQILDFKSSFSEQISTLEAALQHEQEQ-KTRLEELNISL 357
>SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09)
Length = 416
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +3
Query: 147 NTIKDIDNS--LRANKKEVVDIPVKVIVEEIKPSLKSDLESLKCRMKMRKSRGL*SI*EI 320
N +K + +S +++ K + D+PV +EE D ++ K RGL ++ +
Sbjct: 315 NFMKQMKHSQEVKSRKDTLCDLPVSSSMEEKIAKSGMDFNKMRSVYKEGGERGLLTVLAL 374
Query: 321 PGPRS---IKSTKHRILNTTKMLKK 386
P S +K +K R+ T +++ K
Sbjct: 375 PPQYSQLNVKGSKPRVTKTIRIINK 399
>SB_49487| Best HMM Match : Zip (HMM E-Value=0.014)
Length = 510
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +2
Query: 266 EVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGF 445
+V ++ I+ LR+ H ++ + HH +KI S + + GF
Sbjct: 49 DVSSGSDSIENEKFTLRDDHTDNHHQNHHDHHHHHHHDKKIDSKTSIATVAWMVIVSDGF 108
Query: 446 QEVSDGI 466
+SDG+
Sbjct: 109 HNLSDGL 115
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 446 QEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNETLHFIKPADTIAAPSV 613
+++ DG + + E + + + FQEN Q QK+N H + + AA +V
Sbjct: 605 EKIIDGAEELGSDMEAVRQQVEQHKKFQENLEQQQQKVNSLTHMVVVVEDNAAENV 660
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 491 QINELQASLQHFQENFGAQIQKLNETLHFIKPADTIAAPSVXET 622
QI+ELQA LQ+F + +I L I+ +++ S+ +T
Sbjct: 559 QISELQAQLQNFMDICFEKIPSTQRALRLIRKFESLGLDSLRDT 602
>SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)
Length = 458
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 117 SSEQELIDQANTIKDIDNSLRANKKEVVDIPVKV-IVEEIKPSLKSDLESLKCRMKM 284
SS ++LID I+D ++S +KE + + +V +E K SL+ + L+ ++K+
Sbjct: 152 SSRRDLIDAHRKIRDAEDSKETLRKENLHVKRQVKDLEMEKQSLEKSVSDLREKVKL 208
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 308 DLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYART 487
D P + QE E +N E E E+ +S +KN ++ E + +G+
Sbjct: 652 DELQPYKSKCQELEQENKELMEKYERDLSELKNKMDEVEERYKMTENIEEEGMKTLEHEL 711
Query: 488 E----QINELQASLQHFQENFGAQIQKL 559
+ ++ EL+ + EN+GAQ++ +
Sbjct: 712 QIYKAKVKELEDGNRMLVENYGAQLENM 739
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 272 PDENEEIKRPLVDLRNPGPPQHQEHETQN---PEHHEDAEKI--VSSVKNDINTAEIALR 436
PDE E + + DL NP + E E Q+ + +D EKI V S N + I L
Sbjct: 831 PDEREIVLSEIYDLDNPSDDEELETEIQDALETANEQDKEKILAVYSALRSPNLSGIELA 890
Query: 437 Q 439
Q
Sbjct: 891 Q 891
>SB_9721| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 216
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 99 NVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVI-VEEIKPSLKSDLESLKCR 275
N+ + L + +DQAN IKD L + K + D K+I ++ K L + + LK R
Sbjct: 87 NLTKQLKQAKLELDQANKIKDDYEKLNSKTKSLED---KIIYLDATKRQLPKEKDELKSR 143
Query: 276 M 278
+
Sbjct: 144 V 144
>SB_6634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 257 RKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKND 409
+K+ V + EE+ R L+ L GPP + T+ P E ++S VK +
Sbjct: 59 KKYLVAEFREELVRQLLGLEEFGPPPAHKPPTKAPNQFETVHMPMMSDVKRN 110
>SB_20535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 27.9 bits (59), Expect = 9.3
Identities = 7/31 (22%), Positives = 16/31 (51%)
Frame = -1
Query: 579 IKCSVSFNFCI*APKFSWKCCKLAWSSLICS 487
++C + + + + F W CC + W ++ S
Sbjct: 169 LRCFIGWRGIVTSSTFEWLCCFIVWREIVTS 199
>SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10)
Length = 624
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 531 SWKCCKLAWSSLICSVRAYHFPIPSDTSWK 442
SW+ + W S++ S +++ + SD SW+
Sbjct: 107 SWQSMVVQWQSMVVSDKSWQSMVVSDKSWQ 136
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 102 VVENLSSEQELIDQANTIKDIDNSLRANKKEVVD 203
V E + S++E+ D N +KD+ +S+ KK+ D
Sbjct: 302 VKEAMPSKKEIPDMRNNLKDLKSSINEVKKQTDD 335
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,526,648
Number of Sequences: 59808
Number of extensions: 343829
Number of successful extensions: 1369
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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