BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0648 (750 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 31 0.76 SB_37386| Best HMM Match : DUF164 (HMM E-Value=0.46) 31 1.00 SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1) 31 1.00 SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00 SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7) 31 1.3 SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3 SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 3.0 SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09) 29 3.0 SB_49487| Best HMM Match : Zip (HMM E-Value=0.014) 29 4.0 SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 29 5.3 SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 29 5.3 SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 28 7.0 SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 28 7.0 SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_9721| Best HMM Match : Filament (HMM E-Value=0.2) 28 7.0 SB_6634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_20535| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3 SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10) 28 9.3 SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 28 9.3 >SB_1285| Best HMM Match : SET (HMM E-Value=0.011) Length = 829 Score = 31.5 bits (68), Expect = 0.76 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +2 Query: 257 RKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKNDI 412 +K+ V + EE+ R LV L GPP + T+ P E ++S VK ++ Sbjct: 554 KKYSVAEFREELVRQLVGLEEFGPPPAHKPPTRAPNQFETVHMPMMSDVKRNL 606 >SB_37386| Best HMM Match : DUF164 (HMM E-Value=0.46) Length = 189 Score = 31.1 bits (67), Expect = 1.00 Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Frame = +3 Query: 60 IPDKVPEAEDKPLNVVENLSSEQELID-QANTIKDIDNSLRANKKEVVDIPVKV-IVEEI 233 + +K+ AE + + ++L+ ++ + Q + ++D + L + +K++ D+ V E Sbjct: 26 LTEKLDTAETSLVFMKKDLARKEGIYKAQQDELEDAEKQLASTRKKLQDMKASYEAVNEE 85 Query: 234 KPSLKSDLESLKCRM 278 LK+DLES+K R+ Sbjct: 86 NEKLKNDLESIKRRI 100 >SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1) Length = 363 Score = 31.1 bits (67), Expect = 1.00 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Frame = +2 Query: 383 KIVSSVKNDINTAEIALRQGFQEVSDGIGKW----YARTEQINELQASLQHFQENFGAQI 550 K S N+ + ++ GF +V G G W Y E +N Q +L F+++ A + Sbjct: 43 KFTGSCTNESDVGQMRFDNGFLQVCTGTGGWRSMQYQGCEPLNVAQRNLDAFKKSSFAVL 102 Query: 551 QKLNETL 571 + N+ L Sbjct: 103 FQFNKNL 109 >SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1040 Score = 31.1 bits (67), Expect = 1.00 Identities = 21/74 (28%), Positives = 41/74 (55%) Frame = +3 Query: 66 DKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSL 245 +KV E+ D + +EN EL +Q IK+ + L+ +KE+ + K+I E+ L Sbjct: 603 EKVNESRDDEITELEN-----ELEEQREIIKENEEKLKEKEKEIEKLKKKII--ELSDKL 655 Query: 246 KSDLESLKCRMKMR 287 K D+E+ + +++ + Sbjct: 656 K-DMETSRNKVETK 668 >SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7) Length = 149 Score = 30.7 bits (66), Expect = 1.3 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +3 Query: 57 SIPDKVPEAEDKPLNVVENLSSEQELIDQ-ANTIKDIDNSLRANKKEVVDIPVKVIVEEI 233 SIP P+ + K LN VEN++ +E ++ A+ + D+ N + + K E V V+ + Sbjct: 74 SIPLAKPQKQQKVLNAVENINWPEEKKERFADVLNDVHN-ISSEKSEEEGDGVVFFVKSL 132 Query: 234 KPSLKSDLESLK 269 K + +++L LK Sbjct: 133 KWA-RNELRILK 143 >SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 787 Score = 30.7 bits (66), Expect = 1.3 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +2 Query: 257 RKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKND 409 +K+ V + EE+ R LV L GPP + T+ P E ++S VK + Sbjct: 554 KKYSVAEFREELVRQLVGLEEFGPPPAHKPPTRAPNQFETVHMPMMSDVKRN 605 >SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 652 Score = 30.3 bits (65), Expect = 1.7 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = +2 Query: 320 PGPPQHQEHETQNPEHHEDAEKIVSSVKN---DINTAEIALRQGFQEVSDGIGKWYARTE 490 P PP H + E H E E+I S K+ D+ A+ L++ +++ + +G Y R Sbjct: 282 PNPPPHLDEEKIKQLHEELKEEIKSMAKDSEKDLEDAKKDLKEEIEQIKEEVG--YLRYM 339 Query: 491 QINEL 505 + +L Sbjct: 340 EAKQL 344 >SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) Length = 1491 Score = 29.5 bits (63), Expect = 3.0 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 4/102 (3%) Frame = +2 Query: 278 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVS 457 ENE+I+ V LR+ Q +E + E+ D E+ + S+K + AE + + ++ Sbjct: 259 ENEKIRLEHV-LRDR-ERQLKEKDRIIEENKADYEEDLKSLKELLRKAEEKSKSKMKAIN 316 Query: 458 DG----IGKWYARTEQINELQASLQHFQENFGAQIQKLNETL 571 D + + +EQI+ L+A+LQH QE ++++LN +L Sbjct: 317 DYEIQILDFKSSFSEQISTLEAALQHEQEQ-KTRLEELNISL 357 >SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09) Length = 416 Score = 29.5 bits (63), Expect = 3.0 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Frame = +3 Query: 147 NTIKDIDNS--LRANKKEVVDIPVKVIVEEIKPSLKSDLESLKCRMKMRKSRGL*SI*EI 320 N +K + +S +++ K + D+PV +EE D ++ K RGL ++ + Sbjct: 315 NFMKQMKHSQEVKSRKDTLCDLPVSSSMEEKIAKSGMDFNKMRSVYKEGGERGLLTVLAL 374 Query: 321 PGPRS---IKSTKHRILNTTKMLKK 386 P S +K +K R+ T +++ K Sbjct: 375 PPQYSQLNVKGSKPRVTKTIRIINK 399 >SB_49487| Best HMM Match : Zip (HMM E-Value=0.014) Length = 510 Score = 29.1 bits (62), Expect = 4.0 Identities = 15/67 (22%), Positives = 28/67 (41%) Frame = +2 Query: 266 EVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGF 445 +V ++ I+ LR+ H ++ + HH +KI S + + GF Sbjct: 49 DVSSGSDSIENEKFTLRDDHTDNHHQNHHDHHHHHHHDKKIDSKTSIATVAWMVIVSDGF 108 Query: 446 QEVSDGI 466 +SDG+ Sbjct: 109 HNLSDGL 115 >SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) Length = 1457 Score = 28.7 bits (61), Expect = 5.3 Identities = 15/56 (26%), Positives = 27/56 (48%) Frame = +2 Query: 446 QEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNETLHFIKPADTIAAPSV 613 +++ DG + + E + + + FQEN Q QK+N H + + AA +V Sbjct: 605 EKIIDGAEELGSDMEAVRQQVEQHKKFQENLEQQQQKVNSLTHMVVVVEDNAAENV 660 >SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) Length = 3616 Score = 28.7 bits (61), Expect = 5.3 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +2 Query: 491 QINELQASLQHFQENFGAQIQKLNETLHFIKPADTIAAPSVXET 622 QI+ELQA LQ+F + +I L I+ +++ S+ +T Sbjct: 559 QISELQAQLQNFMDICFEKIPSTQRALRLIRKFESLGLDSLRDT 602 >SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) Length = 458 Score = 28.3 bits (60), Expect = 7.0 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +3 Query: 117 SSEQELIDQANTIKDIDNSLRANKKEVVDIPVKV-IVEEIKPSLKSDLESLKCRMKM 284 SS ++LID I+D ++S +KE + + +V +E K SL+ + L+ ++K+ Sbjct: 152 SSRRDLIDAHRKIRDAEDSKETLRKENLHVKRQVKDLEMEKQSLEKSVSDLREKVKL 208 >SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) Length = 1709 Score = 28.3 bits (60), Expect = 7.0 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = +2 Query: 308 DLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYART 487 D P + QE E +N E E E+ +S +KN ++ E + +G+ Sbjct: 652 DELQPYKSKCQELEQENKELMEKYERDLSELKNKMDEVEERYKMTENIEEEGMKTLEHEL 711 Query: 488 E----QINELQASLQHFQENFGAQIQKL 559 + ++ EL+ + EN+GAQ++ + Sbjct: 712 QIYKAKVKELEDGNRMLVENYGAQLENM 739 >SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1906 Score = 28.3 bits (60), Expect = 7.0 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Frame = +2 Query: 272 PDENEEIKRPLVDLRNPGPPQHQEHETQN---PEHHEDAEKI--VSSVKNDINTAEIALR 436 PDE E + + DL NP + E E Q+ + +D EKI V S N + I L Sbjct: 831 PDEREIVLSEIYDLDNPSDDEELETEIQDALETANEQDKEKILAVYSALRSPNLSGIELA 890 Query: 437 Q 439 Q Sbjct: 891 Q 891 >SB_9721| Best HMM Match : Filament (HMM E-Value=0.2) Length = 216 Score = 28.3 bits (60), Expect = 7.0 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = +3 Query: 99 NVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVI-VEEIKPSLKSDLESLKCR 275 N+ + L + +DQAN IKD L + K + D K+I ++ K L + + LK R Sbjct: 87 NLTKQLKQAKLELDQANKIKDDYEKLNSKTKSLED---KIIYLDATKRQLPKEKDELKSR 143 Query: 276 M 278 + Sbjct: 144 V 144 >SB_6634| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 123 Score = 28.3 bits (60), Expect = 7.0 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +2 Query: 257 RKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKND 409 +K+ V + EE+ R L+ L GPP + T+ P E ++S VK + Sbjct: 59 KKYLVAEFREELVRQLLGLEEFGPPPAHKPPTKAPNQFETVHMPMMSDVKRN 110 >SB_20535| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 220 Score = 27.9 bits (59), Expect = 9.3 Identities = 7/31 (22%), Positives = 16/31 (51%) Frame = -1 Query: 579 IKCSVSFNFCI*APKFSWKCCKLAWSSLICS 487 ++C + + + + F W CC + W ++ S Sbjct: 169 LRCFIGWRGIVTSSTFEWLCCFIVWREIVTS 199 >SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10) Length = 624 Score = 27.9 bits (59), Expect = 9.3 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = -1 Query: 531 SWKCCKLAWSSLICSVRAYHFPIPSDTSWK 442 SW+ + W S++ S +++ + SD SW+ Sbjct: 107 SWQSMVVQWQSMVVSDKSWQSMVVSDKSWQ 136 >SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) Length = 933 Score = 27.9 bits (59), Expect = 9.3 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 102 VVENLSSEQELIDQANTIKDIDNSLRANKKEVVD 203 V E + S++E+ D N +KD+ +S+ KK+ D Sbjct: 302 VKEAMPSKKEIPDMRNNLKDLKSSINEVKKQTDD 335 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,526,648 Number of Sequences: 59808 Number of extensions: 343829 Number of successful extensions: 1369 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1367 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2034222073 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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