Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0648
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 29 2.7
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 2.7
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 29 2.7
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 29 2.7
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 29 2.7
AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical ... 29 2.7
AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical ... 29 2.7
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 29 2.7
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 29 4.7
U00066-2|AAA50741.2| 248|Caenorhabditis elegans Hypothetical pr... 29 4.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.7
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 29 4.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.7
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 6.2
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr... 28 6.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 6.2
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68493-6|CAA92792.1| 335|Caenorhabditis elegans Hypothetical pr... 28 8.1
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 28 8.1
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 8.1
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 28 8.1
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 289 FLIFIRHFKLSKSLFNDGLISSTITLT--GMSTTSFLFARRLLSMSLIVLAWSMSSCSL 119
FL ++ F+ K++ L+ ITLT G T FL +R++ +L S CSL
Sbjct: 25 FLCYLAIFQSPKAIRTYSLVLINITLTNVGACVTGFLLDQRIIQSGKSMLYVSYGYCSL 83
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.5 bits (63), Expect = 2.7
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Frame = +2
Query: 371 EDAEKIVSSVKNDINTAEIAL---RQGFQEVSDGIGKWYARTE----QINELQASLQHFQ 529
E+A +I +++DIN EIAL + + + I K+ + QI E Q +
Sbjct: 1622 EEALRIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQKDEIR 1681
Query: 530 ENFGAQIQKLNETLHFIKPADTIAAPSVXETQNKASFETIESGLKSLKTNFNSGLNQLS 706
E F A +K N L K A + + A E IE L+ + N+ ++ L+
Sbjct: 1682 EQFLAS-EKRNAILQSEKDELAQQAEAAERARRNAEAECIE--LREQNNDLNAHVSALT 1737
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 278 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 439
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -3
Query: 268 FKLSKSLFNDGLISSTITLTGMSTTSFLFARRLLSMSLIVLAWSMSSCSLDKFSTTFKGL 89
F+ K LF + + + L+ + T+ + LL S L + + ++STT GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316
Query: 88 SSASGTLSG 62
+ SGT++G
Sbjct: 317 AYVSGTITG 325
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -3
Query: 268 FKLSKSLFNDGLISSTITLTGMSTTSFLFARRLLSMSLIVLAWSMSSCSLDKFSTTFKGL 89
F+ K LF + + + L+ + T+ + LL S L + + ++STT GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316
Query: 88 SSASGTLSG 62
+ SGT++G
Sbjct: 317 AYVSGTITG 325
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.5 bits (63), Expect = 2.7
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Frame = +2
Query: 371 EDAEKIVSSVKNDINTAEIAL---RQGFQEVSDGIGKWYARTE----QINELQASLQHFQ 529
E+A +I +++DIN EIAL + + + I K+ + QI E Q +
Sbjct: 1622 EEALRIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQKDEIR 1681
Query: 530 ENFGAQIQKLNETLHFIKPADTIAAPSVXETQNKASFETIESGLKSLKTNFNSGLNQLS 706
E F A +K N L K A + + A E IE L+ + N+ ++ L+
Sbjct: 1682 EQFLAS-EKRNAILQSEKDELAQQAEAAERARRNAEAECIE--LREQNNDLNAHVSALT 1737
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 347 ETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEV--SDGIGKWYARTEQ--INELQAS 514
+TQ +H +D ++ K +I + +++L V S+ + K E+ + +
Sbjct: 754 QTQLKDHQKDIDQCRHKKKLEIQSMQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSE 813
Query: 515 LQH-FQENFGAQIQKLNETLHFIKPADTIAAPSVXETQNKASFETIES 655
+++ F+E ++K +T+ A+ V E +N+ ETIES
Sbjct: 814 IENTFKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLSETIES 861
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 347 ETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEV--SDGIGKWYARTEQ--INELQAS 514
+TQ +H +D ++ K +I + +++L V S+ + K E+ + +
Sbjct: 754 QTQLKDHQKDIDQCRHKKKLEIQSMQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSE 813
Query: 515 LQH-FQENFGAQIQKLNETLHFIKPADTIAAPSVXETQNKASFETIES 655
+++ F+E ++K +T+ A+ V E +N+ ETIES
Sbjct: 814 IENTFKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLSETIES 861
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 278 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 439
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical
protein ZK1055.6a protein.
Length = 531
Score = 29.5 bits (63), Expect = 2.7
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Frame = +3
Query: 276 MKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLKKSFLPSKMTLTQRK-SLFVKASRK 452
+KMR+ RGL + GPR + + + I + + + ++ P M +T+ S + +RK
Sbjct: 257 LKMRRQRGLRIMNRRGGPRMLSNYSNEIDDGVEEVLQTMAPPPMEVTKNTLSTEFRIARK 316
Query: 453 CQTVLEN--------GT--LVPSKLTSSRPACNISKKISA 542
T+L GT L+PS L S P+ N S ++A
Sbjct: 317 A-TILNGVDDHKVTIGTIELIPSLLHQSVPSKNASALLTA 355
>AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical
protein ZK1055.6b protein.
Length = 564
Score = 29.5 bits (63), Expect = 2.7
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Frame = +3
Query: 276 MKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLKKSFLPSKMTLTQRK-SLFVKASRK 452
+KMR+ RGL + GPR + + + I + + + ++ P M +T+ S + +RK
Sbjct: 290 LKMRRQRGLRIMNRRGGPRMLSNYSNEIDDGVEEVLQTMAPPPMEVTKNTLSTEFRIARK 349
Query: 453 CQTVLEN--------GT--LVPSKLTSSRPACNISKKISA 542
T+L GT L+PS L S P+ N S ++A
Sbjct: 350 A-TILNGVDDHKVTIGTIELIPSLLHQSVPSKNASALLTA 388
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 347 ETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEV--SDGIGKWYARTEQ--INELQAS 514
+TQ +H +D ++ K +I + +++L V S+ + K E+ + +
Sbjct: 752 QTQLKDHQKDIDQCRHKKKLEIQSMQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSE 811
Query: 515 LQH-FQENFGAQIQKLNETLHFIKPADTIAAPSVXETQNKASFETIES 655
+++ F+E ++K +T+ A+ V E +N+ ETIES
Sbjct: 812 IENTFKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLSETIES 859
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 63 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 233
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 63 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 233
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 60 IPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKP 239
+P+ PE +PL VV+ + L Q I + ++ + VV+ V+V+ P
Sbjct: 126 VPESTPEPISEPLPVVQEEPASDSLTVQDEQIAQAEPAVEPEEPVVVE-HVEVVTASEDP 184
Query: 240 SLKS 251
+L+S
Sbjct: 185 TLES 188
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 156 KDIDNSLRANKKEVVDIPVKVI-VEEIKPSLKSDLESLKCRMK 281
+++ +LRA + ++ D+ ++ VE+I+ SLKS+ ESL ++
Sbjct: 357 QELTETLRATQDQMADLQEQLTGVEKIRASLKSENESLSASVE 399
>U00066-2|AAA50741.2| 248|Caenorhabditis elegans Hypothetical
protein R12B2.3 protein.
Length = 248
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 318 IPGPRSIKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKL 497
+P RS+ S+ IL K K++ P + KS+ + ++ L+NG L K
Sbjct: 70 LPNARSLGSSTSSILLLHKTYKETSAPPPNQVAF-KSVILANTQLVTEFLQNGELPTFKK 128
Query: 498 TSSRPACNISKKISALK 548
SSR N ++ AL+
Sbjct: 129 QSSRSTNNPWRRYGALR 145
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 63 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 233
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 156 KDIDNSLRANKKEVVDIPVKVI-VEEIKPSLKSDLESLKCRMK 281
+++ +LRA + ++ D+ ++ VE+I+ SLKS+ ESL ++
Sbjct: 357 QELTETLRATQDQMADLQEQLTGVEKIRASLKSENESLSASVE 399
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 63 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 233
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 323 GPPQHQEHETQNPEHHEDAEKIVSSVKN 406
GPP HQ+H Q +H+ A SS N
Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN 160
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 383 KIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQEN 535
+I ++ DIN EIAL + +D EQ+ ELQ ++ Q N
Sbjct: 1622 RIKKKLEGDINELEIALDHANKANADAQKNLKRYQEQVRELQLQVEEEQRN 1672
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 383 KIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQEN 535
+I ++ DIN EIAL + +D EQ+ ELQ ++ Q N
Sbjct: 1622 RIKKKLEGDINELEIALDHANKANADAQKNLKRYQEQVRELQLQVEEEQRN 1672
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 278 ENEEIKRPLVDLRNPGPPQHQEHETQNPE 364
EN+ + V+ + P P QHQ+ + Q PE
Sbjct: 404 ENQRYEGNFVEYQPPPPQQHQQQQPQAPE 432
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 66 DKVPEAEDKPLNVVENLSS-EQELIDQANTIKDIDNSLRANKKE 194
+++ ED+ L + E L E+EL+D+ N K++D + +E
Sbjct: 1253 NRILSLEDQNLELEERLQEMEEELLDEKNKKKEVDAKVEQKSEE 1296
>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical protein
T01E8.3 protein.
Length = 1299
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 387 SFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRPACNISKKISALKYKS 557
SF+ K+ K L SRK V NG+ + S S P N + AL Y++
Sbjct: 958 SFVEGKLDKLVEKGLLPFNSRKLSRVYPNGSRITSNNYSPVPMWNAGCHMVALNYQT 1014
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 383 KIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQEN 535
+I ++ DIN EIAL + +D EQ+ ELQ ++ Q N
Sbjct: 1625 RIKKKLEGDINELEIALDHANKANADAQKNLKRYQEQVRELQLQVEEEQRN 1675
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 69 KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 236
K+ E ED+ + V+N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 69 KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 236
K+ E ED+ + V+N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396
>Z68493-6|CAA92792.1| 335|Caenorhabditis elegans Hypothetical
protein C33A12.8 protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = -3
Query: 535 IFLEMLQAGLELVNLLGTSVPFS-------NTV*HFLEALTKSDFRCVNVIFDGRNDFFS 377
+FL++LQA ++V+L SV + T+ + + F + ++F G N +FS
Sbjct: 228 LFLKVLQAKSQIVSLQKQSVSYKAELSITITTIVMIIFYVINGGFILMYLLFYGTNSYFS 287
Query: 376 IFVVFR 359
+ VV +
Sbjct: 288 LLVVIK 293
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 611 VXETQNKASFETIESGLKSLKTNFNSGLNQLSE 709
+ E +NK E + S LK+LKT N NQ+S+
Sbjct: 331 IQENENKL-IEKLMSELKTLKTELNETKNQISD 362
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 497 NELQASLQHFQENFGAQIQK-LNETLHFIKPADTIAAPSVXETQNKASFETIE-SGLK 664
NE+ A L+H QE F ++ K LN++++ K D + ++ +E SGLK
Sbjct: 724 NEITARLKHDQEYFEDELAKLLNDSMNIKKERDDYLTEHIRANESMIERLKLEISGLK 781
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 497 NELQASLQHFQENFGAQIQK-LNETLHFIKPADTIAAPSVXETQNKASFETIE-SGLK 664
NE+ A L+H QE F ++ K LN++++ K D + ++ +E SGLK
Sbjct: 724 NEITARLKHDQEYFEDELAKLLNDSMNIKKERDDYLTEHIRANESMIERLKLEISGLK 781
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 497 NELQASLQHFQENFGAQIQKLNETLH 574
N L LQ+FQE F + QKLN+ H
Sbjct: 695 NSLPQILQYFQEMFPVRNQKLNKPSH 720
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,914,169
Number of Sequences: 27780
Number of extensions: 271147
Number of successful extensions: 1380
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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