Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0645
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   3.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 589 TYHKL*LISIPYILCTLLIVVKCLLY 666
           T H L L+ I Y  C L+I++ C+ Y
Sbjct: 276 TMHLLFLLCIYYFYCALIILL-CIYY 300


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = -3

Query: 454 VHYYTVLP**F*ASKRATNFVVSKTNQLILLSTNICGFLASFLN 323
           VH + ++     +S    NF+    N  + ++  I  F+ +F N
Sbjct: 31  VHIFIIIALYAHSSYGRENFIYGSMNMTVAITDKIANFMLTFFN 74


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 179 MTCEGCSGAVERVLNR 226
           +TCEGC G   R + +
Sbjct: 203 LTCEGCKGFFRRSITK 218



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -1

Query: 441 LFYHNDFEHPKEPQI 397
           +++ N++EHP E  +
Sbjct: 323 VYFQNEYEHPSEEDV 337


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 593 IISYSLYQSHTFCVLY 640
           +++   Y  H FCVLY
Sbjct: 163 VVTLQAYTLHLFCVLY 178


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 593 IISYSLYQSHTFCVLY 640
           +++   Y  H FCVLY
Sbjct: 163 VVTLQAYTLHLFCVLY 178


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 80  LIECSSKPSYSLFHIVYVYSYSKMTTTHIFN 172
           +I C  + +  +F   Y Y  SKMT   ++N
Sbjct: 258 IIGCLIQFNTIVFSFCYCYYNSKMTKDGVYN 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,727
Number of Sequences: 336
Number of extensions: 4236
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)