BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0645 (750 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 3.1 AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 4.0 DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 5.3 AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 7.1 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.3 >DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine receptor beta2subunit protein. Length = 427 Score = 23.0 bits (47), Expect = 3.1 Identities = 9/33 (27%), Positives = 16/33 (48%) Frame = +1 Query: 334 WQENHICWCSVELAGWFLIPQNLWLFWMLKIIM 432 W+++H+ W S E I + W+ I+M Sbjct: 90 WEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122 >AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A isoform protein. Length = 567 Score = 22.6 bits (46), Expect = 4.0 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +2 Query: 179 MTCEGCSGAVERVLNR 226 +TCEGC G R + + Sbjct: 202 LTCEGCKGFFRRSITK 217 >DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein protein. Length = 484 Score = 22.2 bits (45), Expect = 5.3 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = +1 Query: 352 CWCSVELAGWFLIPQNLWLFWMLKIIMVKQCNNEQL 459 C V LA W I + L+++ KII ++ +++L Sbjct: 387 CLTVVCLAFWSFIVSTILLWFINKIIPIRMSIHDEL 422 >AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. Length = 898 Score = 21.8 bits (44), Expect = 7.1 Identities = 7/26 (26%), Positives = 16/26 (61%) Frame = +1 Query: 475 HYI*SKCIILSHILAIHVYCSLMVSP 552 H + ++ ++ +H+L IH + V+P Sbjct: 383 HAVRNQDVVQTHVLTIHTIPEVKVTP 408 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 21.4 bits (43), Expect = 9.3 Identities = 8/25 (32%), Positives = 13/25 (52%) Frame = +1 Query: 529 YCSLMVSPTK*IAYLPDFTSTYHKL 603 Y + V+P + P+F +HKL Sbjct: 667 YMNSFVNPVIYTVFNPEFRKAFHKL 691 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 210,086 Number of Sequences: 438 Number of extensions: 4723 Number of successful extensions: 9 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -