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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0645
         (750 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g66240.1 68414.m07519 copper homeostasis factor, putative / c...    77   1e-14
At3g56240.1 68416.m06250 copper homeostasis factor / copper chap...    66   2e-11
At1g12520.1 68414.m01449 superoxide dismutase copper chaperone, ...    46   4e-05
At5g17450.1 68418.m02047 heavy-metal-associated domain-containin...    44   1e-04
At5g27690.1 68418.m03321 heavy-metal-associated domain-containin...    43   3e-04
At5g17450.2 68418.m02048 heavy-metal-associated domain-containin...    42   4e-04
At4g39700.1 68417.m05618 heavy-metal-associated domain-containin...    42   6e-04
At3g21490.1 68416.m02711 copper-binding family protein similar t...    41   0.001
At1g06330.1 68414.m00669 copper-binding family protein similar t...    40   0.001
At5g24580.2 68418.m02903 copper-binding family protein similar t...    40   0.002
At5g24580.1 68418.m02902 copper-binding family protein similar t...    40   0.002
At4g08570.1 68417.m01409 heavy-metal-associated domain-containin...    40   0.002
At5g63530.1 68418.m07974 copper chaperone (CCH)-related low simi...    40   0.002
At2g36950.1 68415.m04531 heavy-metal-associated domain-containin...    40   0.002
At1g71050.1 68414.m08200 heavy-metal-associated domain-containin...    40   0.002
At1g23000.1 68414.m02874 heavy-metal-associated domain-containin...    40   0.002
At5g03380.1 68418.m00291 heavy-metal-associated domain-containin...    39   0.004
At1g56210.1 68414.m06460 copper chaperone (CCH)-related low simi...    39   0.004
At5g60800.1 68418.m07628 heavy-metal-associated domain-containin...    38   0.005
At3g48970.1 68416.m05349 copper-binding family protein similar t...    38   0.005
At2g18196.1 68415.m02118 copper chaperone (CCH)-related low simi...    38   0.007
At1g63440.1 68414.m07174 copper-exporting ATPase, putative / res...    38   0.009
At1g29100.1 68414.m03562 copper-binding family protein similar t...    38   0.009
At3g06130.1 68416.m00704 heavy-metal-associated domain-containin...    37   0.012
At2g37390.1 68415.m04585 heavy-metal-associated domain-containin...    36   0.022
At4g35060.1 68417.m04977 heavy-metal-associated domain-containin...    36   0.029
At2g28090.1 68415.m03412 heavy-metal-associated domain-containin...    36   0.029
At1g22990.1 68414.m02873 heavy-metal-associated domain-containin...    36   0.029
At5g19090.2 68418.m02270 heavy-metal-associated domain-containin...    35   0.050
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin...    35   0.050
At3g05220.1 68416.m00569 heavy-metal-associated domain-containin...    35   0.050
At2g28660.1 68415.m03484 copper-binding family protein similar t...    35   0.050
At5g02600.2 68418.m00195 heavy-metal-associated domain-containin...    35   0.066
At5g02600.1 68418.m00196 heavy-metal-associated domain-containin...    35   0.066
At3g02960.1 68416.m00291 copper-binding protein-related low simi...    35   0.066
At4g27590.1 68417.m03963 copper-binding protein-related low simi...    34   0.088
At5g50740.1 68418.m06287 copper chaperone (CCH)-related low simi...    34   0.12 
At3g24450.1 68416.m03068 copper-binding family protein similar t...    34   0.12 
At4g38580.1 68417.m05461 heavy-metal-associated domain-containin...    32   0.35 
At5g26690.1 68418.m03170 heavy-metal-associated domain-containin...    32   0.47 
At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containi...    32   0.47 
At3g53530.1 68416.m05911 heavy-metal-associated domain-containin...    32   0.47 
At5g66110.1 68418.m08328 heavy-metal-associated domain-containin...    31   0.82 
At3g11960.2 68416.m01476 cleavage and polyadenylation specificit...    31   0.82 
At3g11960.1 68416.m01475 cleavage and polyadenylation specificit...    31   0.82 
At1g64580.1 68414.m07320 pentatricopeptide (PPR) repeat-containi...    31   1.1  
At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containi...    28   7.6  

>At1g66240.1 68414.m07519 copper homeostasis factor, putative /
           copper chaperone, putative (CCH) similar to gi:3168840
           contains Pfam profile PF00403: Heavy-metal-associated
           domain
          Length = 106

 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 38/87 (43%), Positives = 54/87 (62%)
 Frame = +2

Query: 104 SYSLFHIVYVYSYSKMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVS 283
           S SLF  + V     M+ T +  V MTCEGC GAV+RVL ++  +GVE   + + EQKV+
Sbjct: 16  SLSLFQALSVVESKAMSQTVVLRVAMTCEGCVGAVKRVLGKM--EGVESFDVDIKEQKVT 73

Query: 284 VKSTLSADDLLEIIKKTGKKTTYVGAQ 364
           VK  +  D +L+ + KTGKKT +  A+
Sbjct: 74  VKGNVQPDAVLQTVTKTGKKTAFWEAE 100


>At3g56240.1 68416.m06250 copper homeostasis factor / copper
           chaperone (CCH) (ATX1) identical to gi:3168840 Pfam
           profile PF00403: Heavy-metal-associated domain
          Length = 121

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 30/68 (44%), Positives = 44/68 (64%)
 Frame = +2

Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIK 328
           M  T +  V M+C+GC GAV RVL ++  +GVE   I + EQKV+VK  +  + + + + 
Sbjct: 1   MAQTVVLKVGMSCQGCVGAVNRVLGKM--EGVESFDIDIKEQKVTVKGNVEPEAVFQTVS 58

Query: 329 KTGKKTTY 352
           KTGKKT+Y
Sbjct: 59  KTGKKTSY 66


>At1g12520.1 68414.m01449 superoxide dismutase copper chaperone,
           putative similar to copper chaperone for superoxide
           dismutase [Homo sapiens] gi|2431868|gb|AAC51764
          Length = 254

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/64 (31%), Positives = 36/64 (56%)
 Frame = +2

Query: 167 FNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKT 346
           F V+MTCEGC  AV+  L  +  +G+E + + L  Q V +  +     + + +++TG+K 
Sbjct: 25  FMVDMTCEGCVNAVKNKLETI--EGIEKVEVDLSNQVVRILGSSPVKAMTQALEQTGRKA 82

Query: 347 TYVG 358
             +G
Sbjct: 83  RLIG 86


>At5g17450.1 68418.m02047 heavy-metal-associated domain-containing
           protein / copper chaperone (CCH)-related similar to
           copper homeostasis factor [Arabidopsis
           thaliana][GI:3168840], and farnesylated proteins GMFP7
           [Glycine max][GI:4097573], ATFP7 [GI:4097555], and ATFP6
           [GI:4097553]; contains heavy-metal-associated domain
           PF00403
          Length = 149

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/60 (30%), Positives = 36/60 (60%)
 Frame = +2

Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKTTY 352
           V+M C+GC   V  V+ R+K  GV+ + ++  + +++V   +  + +L+ +K TGKK  +
Sbjct: 32  VKMDCDGCERRVRNVVRRMK--GVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEF 89


>At5g27690.1 68418.m03321 heavy-metal-associated domain-containing
           protein very low similarity to copper homeostasis factor
           from Arabidopsis thaliana [gi:3168840]; contains Pfam
           heavy metal associated domain PF00403
          Length = 352

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 21/74 (28%), Positives = 40/74 (54%)
 Frame = +2

Query: 119 HIVYVYSYSKMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTL 298
           H+   Y      TT +  V + CEGC   ++++L+++   GV   +I + +QKV+V   +
Sbjct: 18  HVFEDYPEPLRYTTWVLRVSIHCEGCKRKIKKILSKI--DGVYTTNIDVKQQKVTVIGNV 75

Query: 299 SADDLLEIIKKTGK 340
             + L++ I K G+
Sbjct: 76  EPEILIKKIMKAGR 89


>At5g17450.2 68418.m02048 heavy-metal-associated domain-containing
           protein / copper chaperone (CCH)-related similar to
           copper homeostasis factor [Arabidopsis
           thaliana][GI:3168840], and farnesylated proteins GMFP7
           [Glycine max][GI:4097573], ATFP7 [GI:4097555], and ATFP6
           [GI:4097553]; contains heavy-metal-associated domain
           PF00403
          Length = 116

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 17/58 (29%), Positives = 34/58 (58%)
 Frame = +2

Query: 179 MTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKTTY 352
           M C+GC   V  V+ R+K  GV+ + ++  + +++V   +  + +L+ +K TGKK  +
Sbjct: 1   MDCDGCERRVRNVVRRMK--GVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEF 56


>At4g39700.1 68417.m05618 heavy-metal-associated domain-containing
           protein / copper chaperone (CCH)-related low similarity
           to copper homeostasis factor [GI:3168840][PMID:9701579];
           similar to farnesylated proteins GMFP7 [Glycine
           max][GI:4097573] and ATFP7 [GI:4097555]; contains
           heavy-metal-associated domain PF00403
          Length = 158

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 24/66 (36%), Positives = 35/66 (53%)
 Frame = +2

Query: 146 KMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEII 325
           K   T    V M C+GC   ++  L+ LKG  V+ + I+  +QKV+V     A  +L+  
Sbjct: 29  KQFQTVELKVRMDCDGCVLKIKNSLSSLKG--VKTVEINKKQQKVTVSGYADASKVLKKA 86

Query: 326 KKTGKK 343
           K TGKK
Sbjct: 87  KATGKK 92


>At3g21490.1 68416.m02711 copper-binding family protein similar to
           copper homeostasis factor gi:3168840 from Arabidopsis
           thaliana; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 136

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +2

Query: 167 FNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL-EIIKKTGKK 343
           FNV M C  C   + RV+++ K  GVE     +   KV V+  +  + LL ++ KKTGK+
Sbjct: 18  FNVSMHCNDCERKIARVISKFK--GVETFVTDMINHKVVVRGKIDPNKLLKKLKKKTGKR 75

Query: 344 TTYV 355
              V
Sbjct: 76  VKIV 79


>At1g06330.1 68414.m00669 copper-binding family protein similar to
           copper homeostasis factor gi:3168840 from Arabidopsis
           thaliana; contains Pfam heavy-metal-associated domain
           PF00403
          Length = 159

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +2

Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343
           V M C GC   V+  L +++G  V+ + I + +QKV+V        +L+ ++KTG++
Sbjct: 17  VHMDCVGCESRVKNALQKMRG--VDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRR 71


>At5g24580.2 68418.m02903 copper-binding family protein similar to
           copper homeostasis factor gi:3168840 from Arabidopsis
           thaliana; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 318

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 21/64 (32%), Positives = 36/64 (56%)
 Frame = +2

Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343
           I  V++ C GC+  +ER +  LK +GVE++ + + E +V++K  L    +   IKK  K+
Sbjct: 58  ILYVDLHCVGCAKKIERSI--LKIRGVEEVVMDMNENQVTIKGVLDPQAVCNKIKKKTKR 115

Query: 344 TTYV 355
              V
Sbjct: 116 MAKV 119


>At5g24580.1 68418.m02902 copper-binding family protein similar to
           copper homeostasis factor gi:3168840 from Arabidopsis
           thaliana; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 319

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 21/64 (32%), Positives = 36/64 (56%)
 Frame = +2

Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343
           I  V++ C GC+  +ER +  LK +GVE++ + + E +V++K  L    +   IKK  K+
Sbjct: 59  ILYVDLHCVGCAKKIERSI--LKIRGVEEVVMDMNENQVTIKGVLDPQAVCNKIKKKTKR 116

Query: 344 TTYV 355
              V
Sbjct: 117 MAKV 120


>At4g08570.1 68417.m01409 heavy-metal-associated domain-containing
           protein / copper chaperone (CCH)-related low similarity
           to copper homeostasis factor [GI:3168840][PMID:9701579];
           similar to farnesylated proteins GMFP7 [Glycine
           max][GI:4097573] and ATFP7 [GI:4097555]; contains
           heavy-metal-associated domain PF00403
          Length = 150

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 21/66 (31%), Positives = 35/66 (53%)
 Frame = +2

Query: 146 KMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEII 325
           +M T  +    + CEGC   ++ VL+ +K  GV+ + + +  QKV+V   +    +LE  
Sbjct: 24  QMQTVALRVARIDCEGCERKIKHVLSGVK--GVKSVDVDVKLQKVTVTGYIDPKKVLEAA 81

Query: 326 KKTGKK 343
           K T KK
Sbjct: 82  KSTKKK 87


>At5g63530.1 68418.m07974 copper chaperone (CCH)-related low
           similarity to copper homeostasis factor [GI:3168840];
           nearly identical to farnesylated protein ATFP3
           [GI:4097547]; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 355

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLE-II 325
           +  T +  V M CE C+  +++ + R+K  GVE     L   +V+VK       L+E + 
Sbjct: 169 VVVTVVLKVHMHCEACATEIKKRIMRMK--GVESAESDLKSSQVTVKGVFEPQKLVEYVY 226

Query: 326 KKTGK 340
           K+TGK
Sbjct: 227 KRTGK 231



 Score = 34.7 bits (76), Expect = 0.066
 Identities = 21/61 (34%), Positives = 31/61 (50%)
 Frame = +2

Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343
           +  V M CEGC+  V R L     +GVED+       KV VK   +  D L+++ +  +K
Sbjct: 76  VLKVYMHCEGCARKVRRCLKGF--EGVEDVMTDCKTGKVVVKGEKA--DPLKVLARVQRK 131

Query: 344 T 346
           T
Sbjct: 132 T 132


>At2g36950.1 68415.m04531 heavy-metal-associated domain-containing
           protein nearly identical to farnesylated protein ATFP2
           [GI:4097545] Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 386

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 17/58 (29%), Positives = 36/58 (62%)
 Frame = +2

Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKT 346
           + + CEGC   +++++ ++KG  VE ++I   +  V+VK T+   +L+ ++ K  K+T
Sbjct: 160 IRLHCEGCIQKIKKIILKIKG--VETVAIDGAKDVVTVKGTIDVKELVPLLTKKLKRT 215



 Score = 32.3 bits (70), Expect = 0.35
 Identities = 15/65 (23%), Positives = 34/65 (52%)
 Frame = +2

Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIK 328
           + +  ++ V+M CEGC+  ++R++      GV+D++      K+ V   +    L E ++
Sbjct: 48  VVSAFVYKVDMHCEGCAKKIKRMVKHF--DGVKDVTADTGGNKLLVVGKIDPVKLQEKLE 105

Query: 329 KTGKK 343
           +  K+
Sbjct: 106 EKTKR 110


>At1g71050.1 68414.m08200 heavy-metal-associated domain-containing
           protein / copper chaperone (CCH)-related low similarity
           to copper homeostasis factor [GI:3168840][PMID:9701579];
           similar to farnesylated protein ATFP7 [GI:4097555];
           contains heavy-metal-associated domain PF00403
          Length = 152

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 21/65 (32%), Positives = 38/65 (58%)
 Frame = +2

Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIK 328
           M T +I  V+M C+GC   V+  ++ +K  GV+ + ++    KV+V   +    +L+ I+
Sbjct: 27  MQTVNI-KVKMDCDGCERRVKNAVSSMK--GVKSVEVNRKIHKVTVSGYVEPKKVLKRIE 83

Query: 329 KTGKK 343
           +TGKK
Sbjct: 84  RTGKK 88


>At1g23000.1 68414.m02874 heavy-metal-associated domain-containing
           protein similar to farnesylated protein ATFP3
           [GI:4097547]; contains PF00403 Heavy-metal-associated
           domain
          Length = 358

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 20/61 (32%), Positives = 34/61 (55%)
 Frame = +2

Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337
           T    V + CEGC+  V+++L R+  +GV  + I    QKV+V  ++ +  L+  + K G
Sbjct: 14  TFSLRVNIHCEGCNKKVKKLLQRI--EGVCHVKIEAEHQKVTVSGSVDSATLINKLVKAG 71

Query: 338 K 340
           K
Sbjct: 72  K 72


>At5g03380.1 68418.m00291 heavy-metal-associated domain-containing
           protein similar to farnesylated protein ATFP2
           [GI:4097545]; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 392

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/67 (26%), Positives = 35/67 (52%)
 Frame = +2

Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKT 334
           +T +   ++ CEGC   ++R++N++K  GV  ++I   +  V VK  +    L   + + 
Sbjct: 154 STVVLKTKLHCEGCEHKIKRIVNKIK--GVNSVAIDSAKDLVIVKGIIDVKQLTPYLNEK 211

Query: 335 GKKTTYV 355
            K+T  V
Sbjct: 212 LKRTVEV 218



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSV 286
           TT +  ++M CEGC   ++R+    K  GVED+ I     K++V
Sbjct: 24  TTVVMKLDMHCEGCGKKIKRIFKHFK--GVEDVKIDYKSNKLTV 65


>At1g56210.1 68414.m06460 copper chaperone (CCH)-related low
           similarity to copper homeostasis factor
           [GI:3168840][PMID:9701579] and farnesylated proteins
           ATFP3 [GI:4097547] and GMFP7 [Glycine max][GI:4097573];
           contains PF00403 Heavy-metal-associated domain
          Length = 364

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 19/56 (33%), Positives = 33/56 (58%)
 Frame = +2

Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGK 340
           V + CEGC   V+++L  +  +GV  + I + + KV+V   +S + LL+ + K GK
Sbjct: 46  VSIHCEGCKRKVKKILTSI--EGVFKVDIDVKQHKVTVIGIISPEILLKKLNKAGK 99


>At5g60800.1 68418.m07628 heavy-metal-associated domain-containing
           protein similar to farnesylated protein ATFP3
           [GI:4097547]; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 283

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 16/67 (23%), Positives = 36/67 (53%)
 Frame = +2

Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKT 334
           TT +  +   C+GC G +++ + + K  GV  +++   +  ++VK T+    L+EI+ + 
Sbjct: 133 TTAVLKLNFHCQGCIGKIQKTVTKTK--GVNGLTMDKEKNLLTVKGTMDVKKLVEILSEK 190

Query: 335 GKKTTYV 355
            K+   +
Sbjct: 191 LKRAVEI 197



 Score = 34.3 bits (75), Expect = 0.088
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +2

Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLE-IIKKT 334
           T +  V+M CEGC+  + + +     QGVE +       K++V   L    L E + +KT
Sbjct: 27  TVVLKVDMHCEGCASRIVKCVRSF--QGVETVKSESATGKLTVTGALDPVKLREKLEEKT 84

Query: 335 GKKTTYVGAQ 364
            KK   V  Q
Sbjct: 85  KKKVDLVSPQ 94


>At3g48970.1 68416.m05349 copper-binding family protein similar to
           copper homeostasis factor gi:3168840 from Arabidopsis
           thaliana; contains Pfam heavy-metal-associated domain
           PF00403
          Length = 140

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +2

Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKS-TLSADDLLEIIKK 331
           T  I    + CEGC+  + + L +LK  GVE++ + +  QKV+ +   L    +L+ +++
Sbjct: 4   TVEIRVPNLDCEGCASKLRKTLLKLK--GVEEVEVEMETQKVTARGYRLEEKKVLKAVRR 61

Query: 332 TGK 340
            GK
Sbjct: 62  AGK 64


>At2g18196.1 68415.m02118 copper chaperone (CCH)-related low
           similarity to copper chaperone homolog CCH [Glycine max]
           GI:6525011 contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 142

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 15/60 (25%), Positives = 34/60 (56%)
 Frame = +2

Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKTTY 352
           V M C GC   V+  + +L+G  V+ + ++L  ++V+V   +    +L+ +++ GK+  +
Sbjct: 16  VRMCCSGCERVVKHAIYKLRG--VDSVEVNLEMERVTVVGYVERKKVLKAVRRAGKRAEF 73


>At1g63440.1 68414.m07174 copper-exporting ATPase, putative /
           responsive-to-antagonist 1, putative /
           copper-transporting ATPase, putative similar to ATP
           dependent copper transporter SP|Q9S7J8 [Arabidopsis
           thaliana]
          Length = 995

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +2

Query: 179 MTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSA-DDLLEIIKKTG 337
           MTC  CS  +ERVL  + G     +++++ E ++     LS+ D LLE I+  G
Sbjct: 138 MTCTSCSSTIERVLQSVNGVQRAHVALAIEEAEIHYDPRLSSYDRLLEEIENAG 191



 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +2

Query: 179 MTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSV---KSTLSADDLLEIIKKTGKKTT 349
           MTC  C+G+VE+ + RL   G+ D  I     +  +    +++  + + E I+  G + +
Sbjct: 60  MTCSACAGSVEKAIKRL--PGIHDAVIDALNNRAQILFYPNSVDVETIRETIEDAGFEAS 117

Query: 350 YV 355
            +
Sbjct: 118 LI 119


>At1g29100.1 68414.m03562 copper-binding family protein similar to
           copper homeostasis factor gi:3168840 from Arabidopsis
           thaliana; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 141

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +2

Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343
           V M C GC   V + L ++   GV D+ I + +Q+V+V  +     +L++ +   K+
Sbjct: 3   VPMDCPGCENKVRKALEKM--NGVHDVQIDIKQQRVTVTGSAEQKKVLKVARNVTKR 57


>At3g06130.1 68416.m00704 heavy-metal-associated domain-containing
           protein contains Pfam heavy metal associated domain
           PF00403
          Length = 473

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 19/68 (27%), Positives = 36/68 (52%)
 Frame = +2

Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337
           T +  V + C+GC   V+++L ++  +GV    I   + KV+V  ++    L++ + K+G
Sbjct: 11  TCVLKVNIHCDGCKQKVKKILQKI--EGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSG 68

Query: 338 KKTTYVGA 361
           K     GA
Sbjct: 69  KHAEIWGA 76


>At2g37390.1 68415.m04585 heavy-metal-associated domain-containing
           protein contains Pfam PF00403: Heavy-metal-associated
           domain; similar to copper homeostasis factor (CCH)
           (ATX1) (GB:U88711) (TIGR_Ath1:At3g56240) [Arabidopsis
           thaliana]
          Length = 259

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331
           +  V + C GC G V + L R+  QGV   +I    +KV+V   ++  ++L+ I K
Sbjct: 184 VLKVSLHCRGCEGKVRKHLARM--QGVTSFNIDFAAKKVTVTGDITPLEILDSISK 237


>At4g35060.1 68417.m04977 heavy-metal-associated domain-containing
           protein / copper chaperone (CCH)-related low similarity
           to copper homeostasis factor [GI:3168840][PMID:9701579];
           similar to farnesylated proteins GMFP7 [Glycine
           max][GI:4097573] and ATFP6 [GI:4097553]; contains
           heavy-metal-associated domain PF00403
          Length = 153

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +2

Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL-EIIKKTGKK 343
           V + CEGC   V R L  ++  G+ D++I    QKV+V   +  + ++  II +TGK+
Sbjct: 31  VLIDCEGCERKVRRALEGMR--GIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRTGKR 86


>At2g28090.1 68415.m03412 heavy-metal-associated domain-containing
           protein  similar to farnesylated protein ATFP3
           [GI:4097547]; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 245

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = +2

Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKT 334
           TT +  V  +C+GC   +++ ++  K  GV  + +   ++ V+V  T+    + + +K+ 
Sbjct: 122 TTVVLKVNCSCDGCIKRIQKAVSTTK--GVYQVKMDKEKETVTVMGTMDIKSVTDNLKRK 179

Query: 335 GKKTTYV 355
            KKT  V
Sbjct: 180 LKKTVQV 186


>At1g22990.1 68414.m02873 heavy-metal-associated domain-containing
           protein / copper chaperone (CCH)-related low similarity
           to copper homeostasis factor [GI:3168840][PMID:9701579];
           strong similarity to farnesylated protein ATFP7
           [GI:4097555]; contains heavy-metal-associated domain
           PF00403
          Length = 152

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 17/65 (26%), Positives = 36/65 (55%)
 Frame = +2

Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIK 328
           M T +I  V++ C+GC   ++  ++ +K  G + + ++    KV+V   +    +L+ ++
Sbjct: 28  MQTVNI-KVKIDCDGCERKIKNAVSSIK--GAKSVEVNRKMHKVTVSGYVDPKKVLKTVQ 84

Query: 329 KTGKK 343
            TGKK
Sbjct: 85  STGKK 89


>At5g19090.2 68418.m02270 heavy-metal-associated domain-containing
           protein contains Pfam heavy-metal-associated domain
           PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
           isoform contains a non-consensus TG-acceptor splice site
           at intron 3
          Length = 465

 Score = 35.1 bits (77), Expect = 0.050
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +2

Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337
           T +  V + C+GC   V+++L +++G     I   L   KV+V   +    L++ + K+G
Sbjct: 11  TCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELG--KVTVSGNVDPSVLIKKLLKSG 68

Query: 338 KKTTYVGA 361
           K     GA
Sbjct: 69  KHAEIWGA 76


>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
           protein contains Pfam heavy-metal-associated domain
           PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
           isoform contains a non-consensus TG-acceptor splice site
           at intron 3
          Length = 587

 Score = 35.1 bits (77), Expect = 0.050
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +2

Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337
           T +  V + C+GC   V+++L +++G     I   L   KV+V   +    L++ + K+G
Sbjct: 11  TCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELG--KVTVSGNVDPSVLIKKLLKSG 68

Query: 338 KKTTYVGA 361
           K     GA
Sbjct: 69  KHAEIWGA 76


>At3g05220.1 68416.m00569 heavy-metal-associated domain-containing
           protein similar to farnesylated protein 1 (GI:23304411)
           {Hordeum vulgare subsp. spontaneum}; contains Pfam
           profile PF00403: Heavy-metal-associated domain
          Length = 577

 Score = 35.1 bits (77), Expect = 0.050
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = +2

Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337
           T +  V + CEGC   V++ L ++  +GV  +   + + +V+V   +    L++ + K+G
Sbjct: 11  TCVLKVNVHCEGCKHKVKKQLQKI--EGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSG 68

Query: 338 KKTTYVG 358
           K    +G
Sbjct: 69  KHAEILG 75


>At2g28660.1 68415.m03484 copper-binding family protein similar to
           copper homeostasis factor gi:3168840 from Arabidopsis
           thaliana; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 265

 Score = 35.1 bits (77), Expect = 0.050
 Identities = 17/56 (30%), Positives = 32/56 (57%)
 Frame = +2

Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331
           +  V + C+GC G V + ++++  +GV   +I L  +KV+V   ++   L+E I K
Sbjct: 186 VLRVSIHCKGCEGKVRKHISKM--EGVTSYTIDLATKKVTVVGKITPVGLVESISK 239


>At5g02600.2 68418.m00195 heavy-metal-associated domain-containing
           protein low similarity to gi:3168840 copper homeostasis
           factor; contains Pfam heavy-metal-associated domain
           PF00403; predicted proteins, Arabidopsis thaliana
          Length = 319

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 18/56 (32%), Positives = 32/56 (57%)
 Frame = +2

Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331
           +  V + C+GC+G V++ L++LK  GV   +I    +KV+V   ++   +L  I K
Sbjct: 253 VLRVSLHCKGCAGKVKKHLSKLK--GVTSYNIDFAAKKVTVTGDVTPLTVLASISK 306


>At5g02600.1 68418.m00196 heavy-metal-associated domain-containing
           protein low similarity to gi:3168840 copper homeostasis
           factor; contains Pfam heavy-metal-associated domain
           PF00403; predicted proteins, Arabidopsis thaliana
          Length = 319

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 18/56 (32%), Positives = 32/56 (57%)
 Frame = +2

Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331
           +  V + C+GC+G V++ L++LK  GV   +I    +KV+V   ++   +L  I K
Sbjct: 253 VLRVSLHCKGCAGKVKKHLSKLK--GVTSYNIDFAAKKVTVTGDVTPLTVLASISK 306


>At3g02960.1 68416.m00291 copper-binding protein-related low
           similarity to copper homeostasis factor gi:3168840 from
           Arabidopsis thaliana; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 246

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +2

Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343
           +  V M CEGC+  V   L      GVE I   + + KV V      DD L+I+++  KK
Sbjct: 39  VLKVYMHCEGCASQVSHCLRGY--DGVEHIKTEIGDNKVVVSGKF--DDPLKILRRVQKK 94



 Score = 34.3 bits (75), Expect = 0.088
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +2

Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331
           T I  + M CEGC   ++R + ++K  G++ +     +  V V+  +    L+E IKK
Sbjct: 127 TAILRMNMHCEGCVHEIKRGIEKIK--GIQSVEPDRSKSTVVVRGVMDPPKLVEKIKK 182


>At4g27590.1 68417.m03963 copper-binding protein-related low
           similarity to copper homeostasis factor gi:3168840 from
           Arabidopsis thaliana; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 156

 Score = 34.3 bits (75), Expect = 0.088
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +2

Query: 140 YSKMTTTHI-FNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL 316
           Y+K+   ++   V +   GC   V+R L+ LKG  +  + +    QKV+V    +  D+L
Sbjct: 10  YNKVEAQYVEMMVPLYSYGCEKKVKRALSHLKG--IYSVKVDYYNQKVTVWGICNKLDVL 67

Query: 317 EIIKKTGKKTTY 352
            ++KK  K+  +
Sbjct: 68  AMVKKKRKEARF 79


>At5g50740.1 68418.m06287 copper chaperone (CCH)-related low
           similarity to copper homeostasis factor
           [GI:3168840][PMID: 9701579]; similar to farnesylated
           protein ATFP3 [GI:4097547]; contains Pfam profile
           PF00403: Heavy-metal-associated domain
          Length = 162

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = +2

Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343
           +  + M CEGC+  + R L     +GVED++      KV VK   +  D L+++++  +K
Sbjct: 30  VLKIFMHCEGCAKKIHRCLKGF--EGVEDVTTDCKTSKVVVKGEKA--DPLKVLQRLQRK 85

Query: 344 T 346
           +
Sbjct: 86  S 86


>At3g24450.1 68416.m03068 copper-binding family protein similar to
           copper homeostasis factor gi:3168840 from Arabidopsis
           thaliana; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 140

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = +2

Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331
           V M C GC+  VE+ +++L   GV    + L  +KV VK  +   D+LE I K
Sbjct: 80  VSMHCYGCAKKVEKHISKL--DGVTWYKVELESKKVVVKGNILPVDVLESICK 130


>At4g38580.1 68417.m05461 heavy-metal-associated domain-containing
           protein / copper chaperone (CCH)-related low similarity
           to copper homeostasis factor [PMID:9701579][GI:3168840];
           nearly identical to farnesylated protein TFP6
           [GI:4097553]; contains Heavy-metal-associated domain
           PF00403
          Length = 153

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +2

Query: 146 KMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL-EI 322
           K   T    V+M CEGC   V R +  +K  GV  +++     KV+V   +  + ++  +
Sbjct: 23  KQLQTVEIKVKMDCEGCERKVRRSVEGMK--GVSSVTLEPKAHKVTVVGYVDPNKVVARM 80

Query: 323 IKKTGKK 343
             +TGKK
Sbjct: 81  SHRTGKK 87


>At5g26690.1 68418.m03170 heavy-metal-associated domain-containing
           protein low similarity to farnesylated protein GMFP5
           [Glycine max][GI:4097571]; contains Pfam profile
           PF00403: Heavy-metal-associated domain
          Length = 114

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +2

Query: 149 MTTTHI-FNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEII 325
           MTT  I   V++ CE C  A+   +  L  +GV  +S+   +  ++V  T+    + E +
Sbjct: 1   MTTKKIEIKVDIDCEKCKHAIMEAVTEL--EGVNIVSLDQEKSILTVVGTMDPVCVAEQL 58

Query: 326 KKTGKKTTYV 355
           KK  KK   +
Sbjct: 59  KKINKKPVVI 68


>At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 504

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 592 YHKL*LISIPYILCTLLIVVKCLLYSTLIGIDVAALGKWYKLG 720
           + ++ ++ IP+ LCT  I++ C    + + + ++ LGK  KLG
Sbjct: 104 WEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146


>At3g53530.1 68416.m05911 heavy-metal-associated domain-containing
           protein low similarity to gi:3168840 copper homeostasis
           factor; contains Pfam heavy-metal-associated domain
           PF00403
          Length = 247

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 185 CEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331
           C GC G V++ L+++  QGV   +I    +KV+V   ++  ++L  + K
Sbjct: 180 CRGCQGKVKKHLSKM--QGVTSFNIDFASKKVTVTGDITPLEVLGCLSK 226


>At5g66110.1 68418.m08328 heavy-metal-associated domain-containing
           protein similar to farnesylated protein TFP6
           [GI:4097553]; contains Heavy-metal-associated domain
           PF00403
          Length = 121

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +2

Query: 179 MTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL-EIIKKTGKK 343
           M CEGC   V + +  +K  GV  +++   + K++V+  +    ++  ++ +TGKK
Sbjct: 1   MDCEGCERRVRKSVEGMK--GVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRTGKK 54


>At3g11960.2 68416.m01476 cleavage and polyadenylation specificity
           factor (CPSF) A subunit C-terminal domain-containing
           protein similar to Splicing factor 3B subunit 3
           (Spliceosome associatedprotein 130) (SAP 130) (SF3b130)
           (Pre-mRNA splicing factor SF3b 130kDa subunit)
           (SP:Q15393) [Homo sapiens]; contains Pfam PF03178 : CPSF
           A subunit region
          Length = 1329

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = +2

Query: 80  LIECSSKPSYSLFHIVYVYSYSKMTTTHIFN----VEMTCEGCSGAVERVLNRLKGQGVE 247
           L +C  +PS  L  + Y Y  S  +   +F     +E+   G  G VE V  +     ++
Sbjct: 37  LAKCILRPSVVL-QVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTIK 95

Query: 248 DISISLPEQKVSVKSTLSADDLLEIIKKTGK 340
           D+++     K+   S     DLL ++  +GK
Sbjct: 96  DLAVIPQSSKLYSNSLQMGKDLLAVLSDSGK 126


>At3g11960.1 68416.m01475 cleavage and polyadenylation specificity
           factor (CPSF) A subunit C-terminal domain-containing
           protein similar to Splicing factor 3B subunit 3
           (Spliceosome associatedprotein 130) (SAP 130) (SF3b130)
           (Pre-mRNA splicing factor SF3b 130kDa subunit)
           (SP:Q15393) [Homo sapiens]; contains Pfam PF03178 : CPSF
           A subunit region
          Length = 1379

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = +2

Query: 80  LIECSSKPSYSLFHIVYVYSYSKMTTTHIFN----VEMTCEGCSGAVERVLNRLKGQGVE 247
           L +C  +PS  L  + Y Y  S  +   +F     +E+   G  G VE V  +     ++
Sbjct: 37  LAKCILRPSVVL-QVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTIK 95

Query: 248 DISISLPEQKVSVKSTLSADDLLEIIKKTGK 340
           D+++     K+   S     DLL ++  +GK
Sbjct: 96  DLAVIPQSSKLYSNSLQMGKDLLAVLSDSGK 126


>At1g64580.1 68414.m07320 pentatricopeptide (PPR) repeat-containing
           protein low similarity to fertility restorer [Petunia x
           hybrida] GI:22128587; contains Pfam profile PF01535: PPR
           repeat
          Length = 1052

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 592 YHKL*LISIPYILCTLLIVVKCLLYSTLIGIDVAALGKWYKLG 720
           YHK+  + I + L +  I++ C    + + + +A LGK  KLG
Sbjct: 631 YHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 673


>At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 614

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 598 KL*LISIPYILCTLLIVVKCLLYSTLIGIDVAALGKWYKLG 720
           K+ ++ + + L T  I++ CL   + +   +A LGK  KLG
Sbjct: 90  KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,550,311
Number of Sequences: 28952
Number of extensions: 314740
Number of successful extensions: 698
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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