BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0645 (750 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g66240.1 68414.m07519 copper homeostasis factor, putative / c... 77 1e-14 At3g56240.1 68416.m06250 copper homeostasis factor / copper chap... 66 2e-11 At1g12520.1 68414.m01449 superoxide dismutase copper chaperone, ... 46 4e-05 At5g17450.1 68418.m02047 heavy-metal-associated domain-containin... 44 1e-04 At5g27690.1 68418.m03321 heavy-metal-associated domain-containin... 43 3e-04 At5g17450.2 68418.m02048 heavy-metal-associated domain-containin... 42 4e-04 At4g39700.1 68417.m05618 heavy-metal-associated domain-containin... 42 6e-04 At3g21490.1 68416.m02711 copper-binding family protein similar t... 41 0.001 At1g06330.1 68414.m00669 copper-binding family protein similar t... 40 0.001 At5g24580.2 68418.m02903 copper-binding family protein similar t... 40 0.002 At5g24580.1 68418.m02902 copper-binding family protein similar t... 40 0.002 At4g08570.1 68417.m01409 heavy-metal-associated domain-containin... 40 0.002 At5g63530.1 68418.m07974 copper chaperone (CCH)-related low simi... 40 0.002 At2g36950.1 68415.m04531 heavy-metal-associated domain-containin... 40 0.002 At1g71050.1 68414.m08200 heavy-metal-associated domain-containin... 40 0.002 At1g23000.1 68414.m02874 heavy-metal-associated domain-containin... 40 0.002 At5g03380.1 68418.m00291 heavy-metal-associated domain-containin... 39 0.004 At1g56210.1 68414.m06460 copper chaperone (CCH)-related low simi... 39 0.004 At5g60800.1 68418.m07628 heavy-metal-associated domain-containin... 38 0.005 At3g48970.1 68416.m05349 copper-binding family protein similar t... 38 0.005 At2g18196.1 68415.m02118 copper chaperone (CCH)-related low simi... 38 0.007 At1g63440.1 68414.m07174 copper-exporting ATPase, putative / res... 38 0.009 At1g29100.1 68414.m03562 copper-binding family protein similar t... 38 0.009 At3g06130.1 68416.m00704 heavy-metal-associated domain-containin... 37 0.012 At2g37390.1 68415.m04585 heavy-metal-associated domain-containin... 36 0.022 At4g35060.1 68417.m04977 heavy-metal-associated domain-containin... 36 0.029 At2g28090.1 68415.m03412 heavy-metal-associated domain-containin... 36 0.029 At1g22990.1 68414.m02873 heavy-metal-associated domain-containin... 36 0.029 At5g19090.2 68418.m02270 heavy-metal-associated domain-containin... 35 0.050 At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 35 0.050 At3g05220.1 68416.m00569 heavy-metal-associated domain-containin... 35 0.050 At2g28660.1 68415.m03484 copper-binding family protein similar t... 35 0.050 At5g02600.2 68418.m00195 heavy-metal-associated domain-containin... 35 0.066 At5g02600.1 68418.m00196 heavy-metal-associated domain-containin... 35 0.066 At3g02960.1 68416.m00291 copper-binding protein-related low simi... 35 0.066 At4g27590.1 68417.m03963 copper-binding protein-related low simi... 34 0.088 At5g50740.1 68418.m06287 copper chaperone (CCH)-related low simi... 34 0.12 At3g24450.1 68416.m03068 copper-binding family protein similar t... 34 0.12 At4g38580.1 68417.m05461 heavy-metal-associated domain-containin... 32 0.35 At5g26690.1 68418.m03170 heavy-metal-associated domain-containin... 32 0.47 At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containi... 32 0.47 At3g53530.1 68416.m05911 heavy-metal-associated domain-containin... 32 0.47 At5g66110.1 68418.m08328 heavy-metal-associated domain-containin... 31 0.82 At3g11960.2 68416.m01476 cleavage and polyadenylation specificit... 31 0.82 At3g11960.1 68416.m01475 cleavage and polyadenylation specificit... 31 0.82 At1g64580.1 68414.m07320 pentatricopeptide (PPR) repeat-containi... 31 1.1 At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containi... 28 7.6 >At1g66240.1 68414.m07519 copper homeostasis factor, putative / copper chaperone, putative (CCH) similar to gi:3168840 contains Pfam profile PF00403: Heavy-metal-associated domain Length = 106 Score = 77.0 bits (181), Expect = 1e-14 Identities = 38/87 (43%), Positives = 54/87 (62%) Frame = +2 Query: 104 SYSLFHIVYVYSYSKMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVS 283 S SLF + V M+ T + V MTCEGC GAV+RVL ++ +GVE + + EQKV+ Sbjct: 16 SLSLFQALSVVESKAMSQTVVLRVAMTCEGCVGAVKRVLGKM--EGVESFDVDIKEQKVT 73 Query: 284 VKSTLSADDLLEIIKKTGKKTTYVGAQ 364 VK + D +L+ + KTGKKT + A+ Sbjct: 74 VKGNVQPDAVLQTVTKTGKKTAFWEAE 100 >At3g56240.1 68416.m06250 copper homeostasis factor / copper chaperone (CCH) (ATX1) identical to gi:3168840 Pfam profile PF00403: Heavy-metal-associated domain Length = 121 Score = 66.1 bits (154), Expect = 2e-11 Identities = 30/68 (44%), Positives = 44/68 (64%) Frame = +2 Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIK 328 M T + V M+C+GC GAV RVL ++ +GVE I + EQKV+VK + + + + + Sbjct: 1 MAQTVVLKVGMSCQGCVGAVNRVLGKM--EGVESFDIDIKEQKVTVKGNVEPEAVFQTVS 58 Query: 329 KTGKKTTY 352 KTGKKT+Y Sbjct: 59 KTGKKTSY 66 >At1g12520.1 68414.m01449 superoxide dismutase copper chaperone, putative similar to copper chaperone for superoxide dismutase [Homo sapiens] gi|2431868|gb|AAC51764 Length = 254 Score = 45.6 bits (103), Expect = 4e-05 Identities = 20/64 (31%), Positives = 36/64 (56%) Frame = +2 Query: 167 FNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKT 346 F V+MTCEGC AV+ L + +G+E + + L Q V + + + + +++TG+K Sbjct: 25 FMVDMTCEGCVNAVKNKLETI--EGIEKVEVDLSNQVVRILGSSPVKAMTQALEQTGRKA 82 Query: 347 TYVG 358 +G Sbjct: 83 RLIG 86 >At5g17450.1 68418.m02047 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to copper homeostasis factor [Arabidopsis thaliana][GI:3168840], and farnesylated proteins GMFP7 [Glycine max][GI:4097573], ATFP7 [GI:4097555], and ATFP6 [GI:4097553]; contains heavy-metal-associated domain PF00403 Length = 149 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/60 (30%), Positives = 36/60 (60%) Frame = +2 Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKTTY 352 V+M C+GC V V+ R+K GV+ + ++ + +++V + + +L+ +K TGKK + Sbjct: 32 VKMDCDGCERRVRNVVRRMK--GVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEF 89 >At5g27690.1 68418.m03321 heavy-metal-associated domain-containing protein very low similarity to copper homeostasis factor from Arabidopsis thaliana [gi:3168840]; contains Pfam heavy metal associated domain PF00403 Length = 352 Score = 42.7 bits (96), Expect = 3e-04 Identities = 21/74 (28%), Positives = 40/74 (54%) Frame = +2 Query: 119 HIVYVYSYSKMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTL 298 H+ Y TT + V + CEGC ++++L+++ GV +I + +QKV+V + Sbjct: 18 HVFEDYPEPLRYTTWVLRVSIHCEGCKRKIKKILSKI--DGVYTTNIDVKQQKVTVIGNV 75 Query: 299 SADDLLEIIKKTGK 340 + L++ I K G+ Sbjct: 76 EPEILIKKIMKAGR 89 >At5g17450.2 68418.m02048 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to copper homeostasis factor [Arabidopsis thaliana][GI:3168840], and farnesylated proteins GMFP7 [Glycine max][GI:4097573], ATFP7 [GI:4097555], and ATFP6 [GI:4097553]; contains heavy-metal-associated domain PF00403 Length = 116 Score = 41.9 bits (94), Expect = 4e-04 Identities = 17/58 (29%), Positives = 34/58 (58%) Frame = +2 Query: 179 MTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKTTY 352 M C+GC V V+ R+K GV+ + ++ + +++V + + +L+ +K TGKK + Sbjct: 1 MDCDGCERRVRNVVRRMK--GVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEF 56 >At4g39700.1 68417.m05618 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; similar to farnesylated proteins GMFP7 [Glycine max][GI:4097573] and ATFP7 [GI:4097555]; contains heavy-metal-associated domain PF00403 Length = 158 Score = 41.5 bits (93), Expect = 6e-04 Identities = 24/66 (36%), Positives = 35/66 (53%) Frame = +2 Query: 146 KMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEII 325 K T V M C+GC ++ L+ LKG V+ + I+ +QKV+V A +L+ Sbjct: 29 KQFQTVELKVRMDCDGCVLKIKNSLSSLKG--VKTVEINKKQQKVTVSGYADASKVLKKA 86 Query: 326 KKTGKK 343 K TGKK Sbjct: 87 KATGKK 92 >At3g21490.1 68416.m02711 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 136 Score = 40.7 bits (91), Expect = 0.001 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = +2 Query: 167 FNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL-EIIKKTGKK 343 FNV M C C + RV+++ K GVE + KV V+ + + LL ++ KKTGK+ Sbjct: 18 FNVSMHCNDCERKIARVISKFK--GVETFVTDMINHKVVVRGKIDPNKLLKKLKKKTGKR 75 Query: 344 TTYV 355 V Sbjct: 76 VKIV 79 >At1g06330.1 68414.m00669 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam heavy-metal-associated domain PF00403 Length = 159 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/57 (31%), Positives = 33/57 (57%) Frame = +2 Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343 V M C GC V+ L +++G V+ + I + +QKV+V +L+ ++KTG++ Sbjct: 17 VHMDCVGCESRVKNALQKMRG--VDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRR 71 >At5g24580.2 68418.m02903 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 318 Score = 39.9 bits (89), Expect = 0.002 Identities = 21/64 (32%), Positives = 36/64 (56%) Frame = +2 Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343 I V++ C GC+ +ER + LK +GVE++ + + E +V++K L + IKK K+ Sbjct: 58 ILYVDLHCVGCAKKIERSI--LKIRGVEEVVMDMNENQVTIKGVLDPQAVCNKIKKKTKR 115 Query: 344 TTYV 355 V Sbjct: 116 MAKV 119 >At5g24580.1 68418.m02902 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 319 Score = 39.9 bits (89), Expect = 0.002 Identities = 21/64 (32%), Positives = 36/64 (56%) Frame = +2 Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343 I V++ C GC+ +ER + LK +GVE++ + + E +V++K L + IKK K+ Sbjct: 59 ILYVDLHCVGCAKKIERSI--LKIRGVEEVVMDMNENQVTIKGVLDPQAVCNKIKKKTKR 116 Query: 344 TTYV 355 V Sbjct: 117 MAKV 120 >At4g08570.1 68417.m01409 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; similar to farnesylated proteins GMFP7 [Glycine max][GI:4097573] and ATFP7 [GI:4097555]; contains heavy-metal-associated domain PF00403 Length = 150 Score = 39.9 bits (89), Expect = 0.002 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = +2 Query: 146 KMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEII 325 +M T + + CEGC ++ VL+ +K GV+ + + + QKV+V + +LE Sbjct: 24 QMQTVALRVARIDCEGCERKIKHVLSGVK--GVKSVDVDVKLQKVTVTGYIDPKKVLEAA 81 Query: 326 KKTGKK 343 K T KK Sbjct: 82 KSTKKK 87 >At5g63530.1 68418.m07974 copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840]; nearly identical to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 355 Score = 39.5 bits (88), Expect = 0.002 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = +2 Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLE-II 325 + T + V M CE C+ +++ + R+K GVE L +V+VK L+E + Sbjct: 169 VVVTVVLKVHMHCEACATEIKKRIMRMK--GVESAESDLKSSQVTVKGVFEPQKLVEYVY 226 Query: 326 KKTGK 340 K+TGK Sbjct: 227 KRTGK 231 Score = 34.7 bits (76), Expect = 0.066 Identities = 21/61 (34%), Positives = 31/61 (50%) Frame = +2 Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343 + V M CEGC+ V R L +GVED+ KV VK + D L+++ + +K Sbjct: 76 VLKVYMHCEGCARKVRRCLKGF--EGVEDVMTDCKTGKVVVKGEKA--DPLKVLARVQRK 131 Query: 344 T 346 T Sbjct: 132 T 132 >At2g36950.1 68415.m04531 heavy-metal-associated domain-containing protein nearly identical to farnesylated protein ATFP2 [GI:4097545] Pfam profile PF00403: Heavy-metal-associated domain Length = 386 Score = 39.5 bits (88), Expect = 0.002 Identities = 17/58 (29%), Positives = 36/58 (62%) Frame = +2 Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKT 346 + + CEGC +++++ ++KG VE ++I + V+VK T+ +L+ ++ K K+T Sbjct: 160 IRLHCEGCIQKIKKIILKIKG--VETVAIDGAKDVVTVKGTIDVKELVPLLTKKLKRT 215 Score = 32.3 bits (70), Expect = 0.35 Identities = 15/65 (23%), Positives = 34/65 (52%) Frame = +2 Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIK 328 + + ++ V+M CEGC+ ++R++ GV+D++ K+ V + L E ++ Sbjct: 48 VVSAFVYKVDMHCEGCAKKIKRMVKHF--DGVKDVTADTGGNKLLVVGKIDPVKLQEKLE 105 Query: 329 KTGKK 343 + K+ Sbjct: 106 EKTKR 110 >At1g71050.1 68414.m08200 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; similar to farnesylated protein ATFP7 [GI:4097555]; contains heavy-metal-associated domain PF00403 Length = 152 Score = 39.5 bits (88), Expect = 0.002 Identities = 21/65 (32%), Positives = 38/65 (58%) Frame = +2 Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIK 328 M T +I V+M C+GC V+ ++ +K GV+ + ++ KV+V + +L+ I+ Sbjct: 27 MQTVNI-KVKMDCDGCERRVKNAVSSMK--GVKSVEVNRKIHKVTVSGYVEPKKVLKRIE 83 Query: 329 KTGKK 343 +TGKK Sbjct: 84 RTGKK 88 >At1g23000.1 68414.m02874 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains PF00403 Heavy-metal-associated domain Length = 358 Score = 39.5 bits (88), Expect = 0.002 Identities = 20/61 (32%), Positives = 34/61 (55%) Frame = +2 Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337 T V + CEGC+ V+++L R+ +GV + I QKV+V ++ + L+ + K G Sbjct: 14 TFSLRVNIHCEGCNKKVKKLLQRI--EGVCHVKIEAEHQKVTVSGSVDSATLINKLVKAG 71 Query: 338 K 340 K Sbjct: 72 K 72 >At5g03380.1 68418.m00291 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP2 [GI:4097545]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 392 Score = 38.7 bits (86), Expect = 0.004 Identities = 18/67 (26%), Positives = 35/67 (52%) Frame = +2 Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKT 334 +T + ++ CEGC ++R++N++K GV ++I + V VK + L + + Sbjct: 154 STVVLKTKLHCEGCEHKIKRIVNKIK--GVNSVAIDSAKDLVIVKGIIDVKQLTPYLNEK 211 Query: 335 GKKTTYV 355 K+T V Sbjct: 212 LKRTVEV 218 Score = 37.5 bits (83), Expect = 0.009 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +2 Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSV 286 TT + ++M CEGC ++R+ K GVED+ I K++V Sbjct: 24 TTVVMKLDMHCEGCGKKIKRIFKHFK--GVEDVKIDYKSNKLTV 65 >At1g56210.1 68414.m06460 copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579] and farnesylated proteins ATFP3 [GI:4097547] and GMFP7 [Glycine max][GI:4097573]; contains PF00403 Heavy-metal-associated domain Length = 364 Score = 38.7 bits (86), Expect = 0.004 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGK 340 V + CEGC V+++L + +GV + I + + KV+V +S + LL+ + K GK Sbjct: 46 VSIHCEGCKRKVKKILTSI--EGVFKVDIDVKQHKVTVIGIISPEILLKKLNKAGK 99 >At5g60800.1 68418.m07628 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 283 Score = 38.3 bits (85), Expect = 0.005 Identities = 16/67 (23%), Positives = 36/67 (53%) Frame = +2 Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKT 334 TT + + C+GC G +++ + + K GV +++ + ++VK T+ L+EI+ + Sbjct: 133 TTAVLKLNFHCQGCIGKIQKTVTKTK--GVNGLTMDKEKNLLTVKGTMDVKKLVEILSEK 190 Query: 335 GKKTTYV 355 K+ + Sbjct: 191 LKRAVEI 197 Score = 34.3 bits (75), Expect = 0.088 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +2 Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLE-IIKKT 334 T + V+M CEGC+ + + + QGVE + K++V L L E + +KT Sbjct: 27 TVVLKVDMHCEGCASRIVKCVRSF--QGVETVKSESATGKLTVTGALDPVKLREKLEEKT 84 Query: 335 GKKTTYVGAQ 364 KK V Q Sbjct: 85 KKKVDLVSPQ 94 >At3g48970.1 68416.m05349 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam heavy-metal-associated domain PF00403 Length = 140 Score = 38.3 bits (85), Expect = 0.005 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = +2 Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKS-TLSADDLLEIIKK 331 T I + CEGC+ + + L +LK GVE++ + + QKV+ + L +L+ +++ Sbjct: 4 TVEIRVPNLDCEGCASKLRKTLLKLK--GVEEVEVEMETQKVTARGYRLEEKKVLKAVRR 61 Query: 332 TGK 340 GK Sbjct: 62 AGK 64 >At2g18196.1 68415.m02118 copper chaperone (CCH)-related low similarity to copper chaperone homolog CCH [Glycine max] GI:6525011 contains Pfam profile PF00403: Heavy-metal-associated domain Length = 142 Score = 37.9 bits (84), Expect = 0.007 Identities = 15/60 (25%), Positives = 34/60 (56%) Frame = +2 Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKKTTY 352 V M C GC V+ + +L+G V+ + ++L ++V+V + +L+ +++ GK+ + Sbjct: 16 VRMCCSGCERVVKHAIYKLRG--VDSVEVNLEMERVTVVGYVERKKVLKAVRRAGKRAEF 73 >At1g63440.1 68414.m07174 copper-exporting ATPase, putative / responsive-to-antagonist 1, putative / copper-transporting ATPase, putative similar to ATP dependent copper transporter SP|Q9S7J8 [Arabidopsis thaliana] Length = 995 Score = 37.5 bits (83), Expect = 0.009 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +2 Query: 179 MTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSA-DDLLEIIKKTG 337 MTC CS +ERVL + G +++++ E ++ LS+ D LLE I+ G Sbjct: 138 MTCTSCSSTIERVLQSVNGVQRAHVALAIEEAEIHYDPRLSSYDRLLEEIENAG 191 Score = 29.9 bits (64), Expect = 1.9 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Frame = +2 Query: 179 MTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSV---KSTLSADDLLEIIKKTGKKTT 349 MTC C+G+VE+ + RL G+ D I + + +++ + + E I+ G + + Sbjct: 60 MTCSACAGSVEKAIKRL--PGIHDAVIDALNNRAQILFYPNSVDVETIRETIEDAGFEAS 117 Query: 350 YV 355 + Sbjct: 118 LI 119 >At1g29100.1 68414.m03562 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 141 Score = 37.5 bits (83), Expect = 0.009 Identities = 16/57 (28%), Positives = 30/57 (52%) Frame = +2 Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343 V M C GC V + L ++ GV D+ I + +Q+V+V + +L++ + K+ Sbjct: 3 VPMDCPGCENKVRKALEKM--NGVHDVQIDIKQQRVTVTGSAEQKKVLKVARNVTKR 57 >At3g06130.1 68416.m00704 heavy-metal-associated domain-containing protein contains Pfam heavy metal associated domain PF00403 Length = 473 Score = 37.1 bits (82), Expect = 0.012 Identities = 19/68 (27%), Positives = 36/68 (52%) Frame = +2 Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337 T + V + C+GC V+++L ++ +GV I + KV+V ++ L++ + K+G Sbjct: 11 TCVLKVNIHCDGCKQKVKKILQKI--EGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSG 68 Query: 338 KKTTYVGA 361 K GA Sbjct: 69 KHAEIWGA 76 >At2g37390.1 68415.m04585 heavy-metal-associated domain-containing protein contains Pfam PF00403: Heavy-metal-associated domain; similar to copper homeostasis factor (CCH) (ATX1) (GB:U88711) (TIGR_Ath1:At3g56240) [Arabidopsis thaliana] Length = 259 Score = 36.3 bits (80), Expect = 0.022 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +2 Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331 + V + C GC G V + L R+ QGV +I +KV+V ++ ++L+ I K Sbjct: 184 VLKVSLHCRGCEGKVRKHLARM--QGVTSFNIDFAAKKVTVTGDITPLEILDSISK 237 >At4g35060.1 68417.m04977 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; similar to farnesylated proteins GMFP7 [Glycine max][GI:4097573] and ATFP6 [GI:4097553]; contains heavy-metal-associated domain PF00403 Length = 153 Score = 35.9 bits (79), Expect = 0.029 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +2 Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL-EIIKKTGKK 343 V + CEGC V R L ++ G+ D++I QKV+V + + ++ II +TGK+ Sbjct: 31 VLIDCEGCERKVRRALEGMR--GIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRTGKR 86 >At2g28090.1 68415.m03412 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 245 Score = 35.9 bits (79), Expect = 0.029 Identities = 17/67 (25%), Positives = 35/67 (52%) Frame = +2 Query: 155 TTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKT 334 TT + V +C+GC +++ ++ K GV + + ++ V+V T+ + + +K+ Sbjct: 122 TTVVLKVNCSCDGCIKRIQKAVSTTK--GVYQVKMDKEKETVTVMGTMDIKSVTDNLKRK 179 Query: 335 GKKTTYV 355 KKT V Sbjct: 180 LKKTVQV 186 >At1g22990.1 68414.m02873 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; strong similarity to farnesylated protein ATFP7 [GI:4097555]; contains heavy-metal-associated domain PF00403 Length = 152 Score = 35.9 bits (79), Expect = 0.029 Identities = 17/65 (26%), Positives = 36/65 (55%) Frame = +2 Query: 149 MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIK 328 M T +I V++ C+GC ++ ++ +K G + + ++ KV+V + +L+ ++ Sbjct: 28 MQTVNI-KVKIDCDGCERKIKNAVSSIK--GAKSVEVNRKMHKVTVSGYVDPKKVLKTVQ 84 Query: 329 KTGKK 343 TGKK Sbjct: 85 STGKK 89 >At5g19090.2 68418.m02270 heavy-metal-associated domain-containing protein contains Pfam heavy-metal-associated domain PF00403; glycine-rich protein GRP22, rape, PIR:S31415; isoform contains a non-consensus TG-acceptor splice site at intron 3 Length = 465 Score = 35.1 bits (77), Expect = 0.050 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = +2 Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337 T + V + C+GC V+++L +++G I L KV+V + L++ + K+G Sbjct: 11 TCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELG--KVTVSGNVDPSVLIKKLLKSG 68 Query: 338 KKTTYVGA 361 K GA Sbjct: 69 KHAEIWGA 76 >At5g19090.1 68418.m02269 heavy-metal-associated domain-containing protein contains Pfam heavy-metal-associated domain PF00403; glycine-rich protein GRP22, rape, PIR:S31415; isoform contains a non-consensus TG-acceptor splice site at intron 3 Length = 587 Score = 35.1 bits (77), Expect = 0.050 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = +2 Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337 T + V + C+GC V+++L +++G I L KV+V + L++ + K+G Sbjct: 11 TCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELG--KVTVSGNVDPSVLIKKLLKSG 68 Query: 338 KKTTYVGA 361 K GA Sbjct: 69 KHAEIWGA 76 >At3g05220.1 68416.m00569 heavy-metal-associated domain-containing protein similar to farnesylated protein 1 (GI:23304411) {Hordeum vulgare subsp. spontaneum}; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 577 Score = 35.1 bits (77), Expect = 0.050 Identities = 17/67 (25%), Positives = 35/67 (52%) Frame = +2 Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTG 337 T + V + CEGC V++ L ++ +GV + + + +V+V + L++ + K+G Sbjct: 11 TCVLKVNVHCEGCKHKVKKQLQKI--EGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSG 68 Query: 338 KKTTYVG 358 K +G Sbjct: 69 KHAEILG 75 >At2g28660.1 68415.m03484 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 265 Score = 35.1 bits (77), Expect = 0.050 Identities = 17/56 (30%), Positives = 32/56 (57%) Frame = +2 Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331 + V + C+GC G V + ++++ +GV +I L +KV+V ++ L+E I K Sbjct: 186 VLRVSIHCKGCEGKVRKHISKM--EGVTSYTIDLATKKVTVVGKITPVGLVESISK 239 >At5g02600.2 68418.m00195 heavy-metal-associated domain-containing protein low similarity to gi:3168840 copper homeostasis factor; contains Pfam heavy-metal-associated domain PF00403; predicted proteins, Arabidopsis thaliana Length = 319 Score = 34.7 bits (76), Expect = 0.066 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +2 Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331 + V + C+GC+G V++ L++LK GV +I +KV+V ++ +L I K Sbjct: 253 VLRVSLHCKGCAGKVKKHLSKLK--GVTSYNIDFAAKKVTVTGDVTPLTVLASISK 306 >At5g02600.1 68418.m00196 heavy-metal-associated domain-containing protein low similarity to gi:3168840 copper homeostasis factor; contains Pfam heavy-metal-associated domain PF00403; predicted proteins, Arabidopsis thaliana Length = 319 Score = 34.7 bits (76), Expect = 0.066 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +2 Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331 + V + C+GC+G V++ L++LK GV +I +KV+V ++ +L I K Sbjct: 253 VLRVSLHCKGCAGKVKKHLSKLK--GVTSYNIDFAAKKVTVTGDVTPLTVLASISK 306 >At3g02960.1 68416.m00291 copper-binding protein-related low similarity to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 246 Score = 34.7 bits (76), Expect = 0.066 Identities = 21/60 (35%), Positives = 29/60 (48%) Frame = +2 Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343 + V M CEGC+ V L GVE I + + KV V DD L+I+++ KK Sbjct: 39 VLKVYMHCEGCASQVSHCLRGY--DGVEHIKTEIGDNKVVVSGKF--DDPLKILRRVQKK 94 Score = 34.3 bits (75), Expect = 0.088 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = +2 Query: 158 THIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331 T I + M CEGC ++R + ++K G++ + + V V+ + L+E IKK Sbjct: 127 TAILRMNMHCEGCVHEIKRGIEKIK--GIQSVEPDRSKSTVVVRGVMDPPKLVEKIKK 182 >At4g27590.1 68417.m03963 copper-binding protein-related low similarity to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 156 Score = 34.3 bits (75), Expect = 0.088 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +2 Query: 140 YSKMTTTHI-FNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL 316 Y+K+ ++ V + GC V+R L+ LKG + + + QKV+V + D+L Sbjct: 10 YNKVEAQYVEMMVPLYSYGCEKKVKRALSHLKG--IYSVKVDYYNQKVTVWGICNKLDVL 67 Query: 317 EIIKKTGKKTTY 352 ++KK K+ + Sbjct: 68 AMVKKKRKEARF 79 >At5g50740.1 68418.m06287 copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID: 9701579]; similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 162 Score = 33.9 bits (74), Expect = 0.12 Identities = 18/61 (29%), Positives = 33/61 (54%) Frame = +2 Query: 164 IFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKKTGKK 343 + + M CEGC+ + R L +GVED++ KV VK + D L+++++ +K Sbjct: 30 VLKIFMHCEGCAKKIHRCLKGF--EGVEDVTTDCKTSKVVVKGEKA--DPLKVLQRLQRK 85 Query: 344 T 346 + Sbjct: 86 S 86 >At3g24450.1 68416.m03068 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 140 Score = 33.9 bits (74), Expect = 0.12 Identities = 20/53 (37%), Positives = 29/53 (54%) Frame = +2 Query: 173 VEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331 V M C GC+ VE+ +++L GV + L +KV VK + D+LE I K Sbjct: 80 VSMHCYGCAKKVEKHISKL--DGVTWYKVELESKKVVVKGNILPVDVLESICK 130 >At4g38580.1 68417.m05461 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [PMID:9701579][GI:3168840]; nearly identical to farnesylated protein TFP6 [GI:4097553]; contains Heavy-metal-associated domain PF00403 Length = 153 Score = 32.3 bits (70), Expect = 0.35 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +2 Query: 146 KMTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL-EI 322 K T V+M CEGC V R + +K GV +++ KV+V + + ++ + Sbjct: 23 KQLQTVEIKVKMDCEGCERKVRRSVEGMK--GVSSVTLEPKAHKVTVVGYVDPNKVVARM 80 Query: 323 IKKTGKK 343 +TGKK Sbjct: 81 SHRTGKK 87 >At5g26690.1 68418.m03170 heavy-metal-associated domain-containing protein low similarity to farnesylated protein GMFP5 [Glycine max][GI:4097571]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 114 Score = 31.9 bits (69), Expect = 0.47 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +2 Query: 149 MTTTHI-FNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEII 325 MTT I V++ CE C A+ + L +GV +S+ + ++V T+ + E + Sbjct: 1 MTTKKIEIKVDIDCEKCKHAIMEAVTEL--EGVNIVSLDQEKSILTVVGTMDPVCVAEQL 58 Query: 326 KKTGKKTTYV 355 KK KK + Sbjct: 59 KKINKKPVVI 68 >At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 504 Score = 31.9 bits (69), Expect = 0.47 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +1 Query: 592 YHKL*LISIPYILCTLLIVVKCLLYSTLIGIDVAALGKWYKLG 720 + ++ ++ IP+ LCT I++ C + + + ++ LGK KLG Sbjct: 104 WEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146 >At3g53530.1 68416.m05911 heavy-metal-associated domain-containing protein low similarity to gi:3168840 copper homeostasis factor; contains Pfam heavy-metal-associated domain PF00403 Length = 247 Score = 31.9 bits (69), Expect = 0.47 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = +2 Query: 185 CEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIKK 331 C GC G V++ L+++ QGV +I +KV+V ++ ++L + K Sbjct: 180 CRGCQGKVKKHLSKM--QGVTSFNIDFASKKVTVTGDITPLEVLGCLSK 226 >At5g66110.1 68418.m08328 heavy-metal-associated domain-containing protein similar to farnesylated protein TFP6 [GI:4097553]; contains Heavy-metal-associated domain PF00403 Length = 121 Score = 31.1 bits (67), Expect = 0.82 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = +2 Query: 179 MTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLL-EIIKKTGKK 343 M CEGC V + + +K GV +++ + K++V+ + ++ ++ +TGKK Sbjct: 1 MDCEGCERRVRKSVEGMK--GVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRTGKK 54 >At3g11960.2 68416.m01476 cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein similar to Splicing factor 3B subunit 3 (Spliceosome associatedprotein 130) (SAP 130) (SF3b130) (Pre-mRNA splicing factor SF3b 130kDa subunit) (SP:Q15393) [Homo sapiens]; contains Pfam PF03178 : CPSF A subunit region Length = 1329 Score = 31.1 bits (67), Expect = 0.82 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 4/91 (4%) Frame = +2 Query: 80 LIECSSKPSYSLFHIVYVYSYSKMTTTHIFN----VEMTCEGCSGAVERVLNRLKGQGVE 247 L +C +PS L + Y Y S + +F +E+ G G VE V + ++ Sbjct: 37 LAKCILRPSVVL-QVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTIK 95 Query: 248 DISISLPEQKVSVKSTLSADDLLEIIKKTGK 340 D+++ K+ S DLL ++ +GK Sbjct: 96 DLAVIPQSSKLYSNSLQMGKDLLAVLSDSGK 126 >At3g11960.1 68416.m01475 cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein similar to Splicing factor 3B subunit 3 (Spliceosome associatedprotein 130) (SAP 130) (SF3b130) (Pre-mRNA splicing factor SF3b 130kDa subunit) (SP:Q15393) [Homo sapiens]; contains Pfam PF03178 : CPSF A subunit region Length = 1379 Score = 31.1 bits (67), Expect = 0.82 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 4/91 (4%) Frame = +2 Query: 80 LIECSSKPSYSLFHIVYVYSYSKMTTTHIFN----VEMTCEGCSGAVERVLNRLKGQGVE 247 L +C +PS L + Y Y S + +F +E+ G G VE V + ++ Sbjct: 37 LAKCILRPSVVL-QVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTIK 95 Query: 248 DISISLPEQKVSVKSTLSADDLLEIIKKTGK 340 D+++ K+ S DLL ++ +GK Sbjct: 96 DLAVIPQSSKLYSNSLQMGKDLLAVLSDSGK 126 >At1g64580.1 68414.m07320 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587; contains Pfam profile PF01535: PPR repeat Length = 1052 Score = 30.7 bits (66), Expect = 1.1 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 592 YHKL*LISIPYILCTLLIVVKCLLYSTLIGIDVAALGKWYKLG 720 YHK+ + I + L + I++ C + + + +A LGK KLG Sbjct: 631 YHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 673 >At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 614 Score = 27.9 bits (59), Expect = 7.6 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +1 Query: 598 KL*LISIPYILCTLLIVVKCLLYSTLIGIDVAALGKWYKLG 720 K+ ++ + + L T I++ CL + + +A LGK KLG Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,550,311 Number of Sequences: 28952 Number of extensions: 314740 Number of successful extensions: 698 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 665 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 684 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1663169840 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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