Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0644
(518 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 144 8e-34
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 122 5e-27
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 120 2e-26
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 103 3e-21
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 97 2e-19
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 94 2e-18
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 83 5e-15
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 82 6e-15
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 82 9e-15
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 80 3e-14
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 71 1e-11
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 70 3e-11
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 70 4e-11
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 68 1e-10
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 68 1e-10
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 66 6e-10
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 64 2e-09
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 63 4e-09
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 62 7e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 61 1e-08
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 59 5e-08
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 59 5e-08
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 58 1e-07
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 58 2e-07
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 56 4e-07
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 49 6e-05
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 47 3e-04
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 45 0.001
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 40 0.045
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 39 0.079
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 38 0.10
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 36 0.56
UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus buty... 35 1.3
UniRef50_O15421 Cluster: CTG26 alternate open reading frame; n=2... 32 6.8
UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved;... 32 9.0
UniRef50_A5WUX7 Cluster: Novel protein; n=4; Clupeocephala|Rep: ... 32 9.0
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 144 bits (350), Expect = 8e-34
Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
Frame = +3
Query: 120 FEIAVGLRKGHKTTKISAGRKGITDKAIRX-RPARLKGLQTKHSKFVRDLLREVVGHAQY 296
+E+A+GL KGHKT+KI K DK ++ R +RLK +QT+H+KF+RDL+REVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 104
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 122 bits (294), Expect = 5e-27
Identities = 64/102 (62%), Positives = 76/102 (74%)
Frame = +3
Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A
Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52
Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 120 bits (289), Expect = 2e-26
Identities = 57/72 (79%), Positives = 62/72 (86%)
Frame = +3
Query: 204 RXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIR 383
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIR
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIR 62
Query: 384 AKRKREELINVL 419
AKRKREEL N+L
Sbjct: 63 AKRKREELSNIL 74
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 103 bits (246), Expect = 3e-21
Identities = 52/98 (53%), Positives = 70/98 (71%)
Frame = +3
Query: 126 IAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKR 305
+AVGL KGH T++ ++ R R KG+ +K +K VR+L+RE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 306 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
+E+L++SKDKRALKFLKRR+GTH RAK KREEL NV+
Sbjct: 59 VLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVI 96
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 97.1 bits (231), Expect = 2e-19
Identities = 53/96 (55%), Positives = 62/96 (64%)
Frame = +3
Query: 132 VGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKRAM 311
VG+ KGH TK + + RP+ KG TK FVR L+REVVG A YEKR
Sbjct: 12 VGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRIT 61
Query: 312 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
ELLKV KDKRALK KR+LGTH RAK+KREE+ V+
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVI 97
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 93.9 bits (223), Expect = 2e-18
Identities = 52/96 (54%), Positives = 62/96 (64%)
Frame = +3
Query: 132 VGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKRAM 311
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 312 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
ELLKV KDKRALK KR+LGTH RAKRKREE+ +VL
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVL 97
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 82.6 bits (195), Expect = 5e-15
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +3
Query: 210 RPARLKGLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 389
RP+ KGL+T+ FVR ++REV G + YEKR MELL+ SKDK+A K K+RLGT +R+K
Sbjct: 120 RPSNKKGLKTEKKTFVRSVIREVAGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSK 179
Query: 390 RKREELINVL 419
RK EEL V+
Sbjct: 180 RKIEELSAVI 189
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 82.2 bits (194), Expect = 6e-15
Identities = 41/80 (51%), Positives = 56/80 (70%)
Frame = +3
Query: 180 KGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLK 359
K +T + + RP+R KG +K + FVR ++REV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 360 RRLGTHIRAKRKREELINVL 419
+RLGT RAK K EEL +V+
Sbjct: 73 KRLGTLKRAKGKIEELTSVI 92
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 81.8 bits (193), Expect = 9e-15
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 126 IAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKR 305
IAVGL KGH TT I + RP+R KGL+TK + V +++REV G A YE+
Sbjct: 16 IAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIREVCGFAPYERH 67
Query: 306 AMELLK---VSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
+EL+K S KRALKF K+RLGT RAK K +E++ V+
Sbjct: 68 MIELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVV 108
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 80.2 bits (189), Expect = 3e-14
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = +3
Query: 234 QTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELIN 413
Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF K+RLGTH+RAKRKRE++
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAE 87
Query: 414 VL 419
L
Sbjct: 88 AL 89
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 71.3 bits (167), Expect = 1e-11
Identities = 41/98 (41%), Positives = 61/98 (62%)
Frame = +3
Query: 126 IAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKR 305
IA+GL KG K T ++ K I+ K KG + +KFVR L+RE+ G + YE+R
Sbjct: 7 IAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGLSPYERR 56
Query: 306 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
++L++ S +KRA K K+RLG+ RAK K EE+ N++
Sbjct: 57 LIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNII 94
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 70.1 bits (164), Expect = 3e-11
Identities = 44/98 (44%), Positives = 57/98 (58%)
Frame = +3
Query: 126 IAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKR 305
+A+GL KGHK K + K P RL TKH+KFV+D++REV Y+
Sbjct: 7 MAMGLDKGHKVMKNISKPK-------HSSPHRLL---TKHTKFVQDMIREVCDFMSYDWC 56
Query: 306 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
+ L KVS DK A KF+K+R+G HI KRK EEL V+
Sbjct: 57 TVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVI 94
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 69.7 bits (163), Expect = 4e-11
Identities = 41/90 (45%), Positives = 53/90 (58%)
Frame = +3
Query: 132 VGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKRAM 311
VGL KGH TK K + RP+ KG +K + FVR+L+REV G YEKR
Sbjct: 12 VGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRIT 61
Query: 312 ELLKVSKDKRALKFLKRRLGTHIRAKRKRE 401
ELLKV KDKRALK + ++G H + ++ E
Sbjct: 62 ELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 67.7 bits (158), Expect = 1e-10
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 165 ISAGRKGITDKAIRXRPARLKGLQTKHS-KFVRDLLREVVGHAQYEKRAMELLKVSKDKR 341
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 342 ALKFLKRRLGTHIRAKRKREELINVL 419
ALKF+++ LGTHI AKRK EL NVL
Sbjct: 75 ALKFIQKMLGTHICAKRKARELSNVL 100
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 67.7 bits (158), Expect = 1e-10
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = +3
Query: 126 IAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKR 305
IAVG GH TK S +K I K++ K+ + D++RE+ G + YEKR
Sbjct: 13 IAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSPYEKR 60
Query: 306 AMELLKVSKD---KRALKFLKRRLGTHIRAKRKREELINVL 419
+EL+KV KR+LK+ K++LGTH R K KREE+ ++
Sbjct: 61 LIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIV 101
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 65.7 bits (153), Expect = 6e-10
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +3
Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ EEL NVL
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVL 96
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 63.7 bits (148), Expect = 2e-09
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Frame = +3
Query: 237 TKHSKFVRDLLREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREEL 407
+K + ++D++RE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K KREE+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEI 115
Query: 408 INVL 419
V+
Sbjct: 116 QKVV 119
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 62.9 bits (146), Expect = 4e-09
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +3
Query: 225 KGLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 404
K + TK +RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 405 LINV 416
+ N+
Sbjct: 95 IANI 98
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 62.1 bits (144), Expect = 7e-09
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Frame = +3
Query: 126 IAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKR 305
IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + YEKR
Sbjct: 6 IAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPYEKR 58
Query: 306 AMELLKVS--KD-KRALKFLKRRLGTHIRAKRKREELINV 416
+EL K + KD K+A K +RLGT+ R KRK E + N+
Sbjct: 59 IIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNL 98
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +3
Query: 318 LKVSKDKRALKFLKRRLGTHIRAKRKREELIN 413
LKVSKDKRALKF+K+R+GTHIRAKRKREEL N
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 59.3 bits (137), Expect = 5e-08
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +3
Query: 243 HSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 407
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK KR++L
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQL 83
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 59.3 bits (137), Expect = 5e-08
Identities = 37/98 (37%), Positives = 55/98 (56%)
Frame = +3
Query: 126 IAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKR 305
I G KG+KTT+ A R D+ L K + V+ ++ ++VG + E+R
Sbjct: 15 IIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLVGFSPMERR 64
Query: 306 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
ELL+V KDKRALKF K+RLG+ AK++R ++ L
Sbjct: 65 VQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEAL 102
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/98 (34%), Positives = 52/98 (53%)
Frame = +3
Query: 126 IAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKR 305
I G KGH TT+ + + P + KH + V+ ++ ++VG + EKR
Sbjct: 10 IIAGFNKGHVTTR----------RPRQPSPNDRFAVPHKHLRAVKAIIADLVGLSPLEKR 59
Query: 306 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
E L+V K+KRALK+ K+RLG AK+KR ++ L
Sbjct: 60 VQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEAL 97
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 57.6 bits (133), Expect = 2e-07
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +3
Query: 156 TTKISAGRKGITDKAIRXRPARLKG---LQTKHSKFVRDLLREVVGHAQYEKRAMELLKV 326
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 327 SKDKRALKFLKRRLGTHIRA 386
+DK AL+F+ +HIRA
Sbjct: 69 FQDKLALRFMSG--PSHIRA 86
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 56.4 bits (130), Expect = 4e-07
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +3
Query: 213 PARLKGLQT--KHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 386
P R GL + K F R ++ E+VG YE+ M+L+K+ + + A +FLK+RLGTH RA
Sbjct: 13 PKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHRRA 72
Query: 387 KRKREELINVL 419
+K L V+
Sbjct: 73 MKKLNTLEEVV 83
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 49.2 bits (112), Expect = 6e-05
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 126 IAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKR 305
+A+GL KG + TK A + R R +G TK +K VR+L+RE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 306 AMELLKV 326
MELL V
Sbjct: 60 MMELLLV 66
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +3
Query: 192 DKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKR 341
+K + R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +3
Query: 234 QTKHSKFVRDLLR-EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELI 410
+T+ S+F+ + E+ G + EK+A+ LL+ + +A K L++RLG+H RA K E+L
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
Query: 411 NVL 419
+L
Sbjct: 102 RML 104
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 39.5 bits (88), Expect = 0.045
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 237 TKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKR 362
TK V D++RE G YE+ M+LL+ DK+AL + K+
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKK 66
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 38.7 bits (86), Expect = 0.079
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 324 VSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
V+K + L+ R+LGTH RAKRKREE+ NVL
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVL 51
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 38.3 bits (85), Expect = 0.10
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 234 QTKHSKF-VRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELI 410
+T KF + +L G ++EK+ +K+ +++ALK K++LG RAK+K + +
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSIN 68
Query: 411 NVL 419
++L
Sbjct: 69 HIL 71
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 35.9 bits (79), Expect = 0.56
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 240 KHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 407
K KFV DL + Q + + ++ LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus
butylicus DSM 5456|Rep: Predicted Rad50 - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 887
Score = 34.7 bits (76), Expect = 1.3
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 216 ARLKGLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRL----GTHIR 383
ARL+ L+T+ +K L H +YE+ EL K+ + + LKRRL +
Sbjct: 532 ARLEELRTEQAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVE 591
Query: 384 AKRKREEL 407
A+R REEL
Sbjct: 592 AERLREEL 599
>UniRef50_O15421 Cluster: CTG26 alternate open reading frame; n=2;
Homo sapiens|Rep: CTG26 alternate open reading frame -
Homo sapiens (Human)
Length = 124
Score = 32.3 bits (70), Expect = 6.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 57 CCCXXXCXCXCXCCYI 10
CCC C C C CC++
Sbjct: 104 CCCCCCCCCCCCCCWL 119
>UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved; n=1;
Eimeria tenella|Rep: hypothetical protein, conserved -
Eimeria tenella
Length = 1486
Score = 31.9 bits (69), Expect = 9.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 57 CCCXXXCXCXCXCCY 13
CCC C C C CC+
Sbjct: 1353 CCCCFSCRCCCCCCF 1367
>UniRef50_A5WUX7 Cluster: Novel protein; n=4; Clupeocephala|Rep:
Novel protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 156
Score = 31.9 bits (69), Expect = 9.0
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 249 KFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRR-LGTHIRAKRKREELIN 413
K R++LRE + A Y+ ELLK+ K+ K KRR + +I KR+ +E++N
Sbjct: 93 KRAREILREKLEVA-YKGEESELLKMKKESMQKKQDKRRKVNENIEKKRRFKEMLN 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,989,829
Number of Sequences: 1657284
Number of extensions: 6079291
Number of successful extensions: 16671
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 15478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16406
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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