Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0644
         (518 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive ...    25   2.0  
AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein p...    24   2.7  
AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein p...    24   2.7  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    23   6.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.1  

>AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR9 protein.
          Length = 184

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 415 TLISSSRFLLARMCVPNRRFKNFRARL-SFDTLSNSIALFSY 293
           +LI  S  L A  CV NR+ +  + RL  +DT + +  +F Y
Sbjct: 101 SLIHPSVVLTAAHCVQNRKIEEVKVRLGEWDTQTKN-EMFDY 141


>AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 186 ITDKAI-RXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLK 359
           IT+K + R  P R  G   +  +  R +++++  HA Y      +L  + DK   ++ K
Sbjct: 3   ITEKDLYRDTPVRYLGYANEIGEAFRPVIKKIFVHASYAVAISYVLADTADKSKKQYDK 61


>AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 186 ITDKAI-RXRPARLKGLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLK 359
           IT+K + R  P R  G   +  +  R +++++  HA Y      +L  + DK   ++ K
Sbjct: 3   ITEKDLYRDTPVRYLGYANEIGEAFRPVIKKIFVHASYAVAISYVLADTADKSKKQYDK 61


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 412 LISSSRFLLARMCVPNRRFKNFRARLSF 329
           LIS +  + A  CV  + F+  + RL F
Sbjct: 171 LISRTYVITAAHCVTGKNFQQTKGRLKF 198


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 181 LRPADILVVLWPFRRPTAISKTRRP 107
           L+P+D+L V+  F +P+    T  P
Sbjct: 215 LKPSDLLFVIGDFNQPSISWSTADP 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,026
Number of Sequences: 2352
Number of extensions: 6812
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)