BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0644 (518 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein. 122 8e-28 BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36 p... 122 8e-28 BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36 p... 122 8e-28 BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36 p... 122 8e-28 AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36 p... 122 8e-28 AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36 p... 61 2e-09 U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open read... 32 1.0 U63332-1|AAB05810.1| 46|Homo sapiens super cysteine rich prote... 32 1.4 BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein. 29 9.8 >CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein. Length = 105 Score = 122 bits (294), Expect = 8e-28 Identities = 64/102 (62%), Positives = 76/102 (74%) Frame = +3 Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293 L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52 Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419 YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94 >BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36 protein. Length = 105 Score = 122 bits (294), Expect = 8e-28 Identities = 64/102 (62%), Positives = 76/102 (74%) Frame = +3 Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293 L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52 Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419 YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94 >BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36 protein. Length = 105 Score = 122 bits (294), Expect = 8e-28 Identities = 64/102 (62%), Positives = 76/102 (74%) Frame = +3 Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293 L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52 Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419 YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94 >BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36 protein. Length = 105 Score = 122 bits (294), Expect = 8e-28 Identities = 64/102 (62%), Positives = 76/102 (74%) Frame = +3 Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293 L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52 Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419 YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94 >AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36 protein. Length = 105 Score = 122 bits (294), Expect = 8e-28 Identities = 64/102 (62%), Positives = 76/102 (74%) Frame = +3 Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293 L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52 Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419 YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94 >AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36 protein. Length = 32 Score = 61.3 bits (142), Expect = 2e-09 Identities = 28/32 (87%), Positives = 31/32 (96%) Frame = +3 Query: 318 LKVSKDKRALKFLKRRLGTHIRAKRKREELIN 413 LKVSKDKRALKF+K+R+GTHIRAKRKREEL N Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32 >U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open reading frame protein. Length = 124 Score = 32.3 bits (70), Expect = 1.0 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -3 Query: 57 CCCXXXCXCXCXCCYI 10 CCC C C C CC++ Sbjct: 104 CCCCCCCCCCCCCCWL 119 Score = 31.5 bits (68), Expect = 1.8 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = -3 Query: 57 CCCXXXCXCXCXCCYIYXL 1 CCC C C C CC + L Sbjct: 102 CCCCCCCCCCCCCCCCWLL 120 >U63332-1|AAB05810.1| 46|Homo sapiens super cysteine rich protein protein. Length = 46 Score = 31.9 bits (69), Expect = 1.4 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -3 Query: 57 CCCXXXCXCXCXCCY 13 CCC C C C CC+ Sbjct: 20 CCCCCCCCCCCCCCF 34 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 11 CCCCCCCCCCCCCC 24 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 12 CCCCCCCCCCCCCC 25 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 13 CCCCCCCCCCCCCC 26 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 14 CCCCCCCCCCCCCC 27 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 15 CCCCCCCCCCCCCC 28 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 16 CCCCCCCCCCCCCC 29 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 17 CCCCCCCCCCCCCC 30 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 18 CCCCCCCCCCCCCC 31 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 19 CCCCCCCCCCCCCC 32 Score = 30.7 bits (66), Expect = 3.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 57 CCCXXXCXCXCXCC 16 CCC C C C CC Sbjct: 23 CCCCCCCCCCCFCC 36 >BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein. Length = 48 Score = 29.1 bits (62), Expect = 9.8 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +3 Query: 300 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELIN 413 +R+ + VS+D+ A+ L H++ K+KR+ L N Sbjct: 8 RRSFAFVAVSRDRTAVPSLGHSARLHLKKKKKRKSLFN 45 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 52,344,769 Number of Sequences: 237096 Number of extensions: 912892 Number of successful extensions: 2026 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1994 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4933413474 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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