Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0644
(518 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein. 122 8e-28
BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36 p... 122 8e-28
BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36 p... 122 8e-28
BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36 p... 122 8e-28
AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36 p... 122 8e-28
AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36 p... 61 2e-09
U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open read... 32 1.0
U63332-1|AAB05810.1| 46|Homo sapiens super cysteine rich prote... 32 1.4
BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein. 29 9.8
>CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein.
Length = 105
Score = 122 bits (294), Expect = 8e-28
Identities = 64/102 (62%), Positives = 76/102 (74%)
Frame = +3
Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A
Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52
Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 122 bits (294), Expect = 8e-28
Identities = 64/102 (62%), Positives = 76/102 (74%)
Frame = +3
Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A
Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52
Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 122 bits (294), Expect = 8e-28
Identities = 64/102 (62%), Positives = 76/102 (74%)
Frame = +3
Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A
Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52
Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 122 bits (294), Expect = 8e-28
Identities = 64/102 (62%), Positives = 76/102 (74%)
Frame = +3
Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A
Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52
Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 122 bits (294), Expect = 8e-28
Identities = 64/102 (62%), Positives = 76/102 (74%)
Frame = +3
Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A
Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52
Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
>AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36
protein.
Length = 32
Score = 61.3 bits (142), Expect = 2e-09
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +3
Query: 318 LKVSKDKRALKFLKRRLGTHIRAKRKREELIN 413
LKVSKDKRALKF+K+R+GTHIRAKRKREEL N
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open reading
frame protein.
Length = 124
Score = 32.3 bits (70), Expect = 1.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 57 CCCXXXCXCXCXCCYI 10
CCC C C C CC++
Sbjct: 104 CCCCCCCCCCCCCCWL 119
Score = 31.5 bits (68), Expect = 1.8
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -3
Query: 57 CCCXXXCXCXCXCCYIYXL 1
CCC C C C CC + L
Sbjct: 102 CCCCCCCCCCCCCCCCWLL 120
>U63332-1|AAB05810.1| 46|Homo sapiens super cysteine rich
protein protein.
Length = 46
Score = 31.9 bits (69), Expect = 1.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 57 CCCXXXCXCXCXCCY 13
CCC C C C CC+
Sbjct: 20 CCCCCCCCCCCCCCF 34
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 11 CCCCCCCCCCCCCC 24
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 12 CCCCCCCCCCCCCC 25
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 13 CCCCCCCCCCCCCC 26
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 14 CCCCCCCCCCCCCC 27
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 15 CCCCCCCCCCCCCC 28
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 16 CCCCCCCCCCCCCC 29
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 17 CCCCCCCCCCCCCC 30
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 18 CCCCCCCCCCCCCC 31
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 19 CCCCCCCCCCCCCC 32
Score = 30.7 bits (66), Expect = 3.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 57 CCCXXXCXCXCXCC 16
CCC C C C CC
Sbjct: 23 CCCCCCCCCCCFCC 36
>BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein.
Length = 48
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 300 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELIN 413
+R+ + VS+D+ A+ L H++ K+KR+ L N
Sbjct: 8 RRSFAFVAVSRDRTAVPSLGHSARLHLKKKKKRKSLFN 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,344,769
Number of Sequences: 237096
Number of extensions: 912892
Number of successful extensions: 2026
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1994
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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