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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0644
         (518 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533465-1|CAG38496.1|  105|Homo sapiens RPL36 protein.               122   8e-28
BC091508-1|AAH91508.1|  105|Homo sapiens ribosomal protein L36 p...   122   8e-28
BC004971-1|AAH04971.1|  105|Homo sapiens ribosomal protein L36 p...   122   8e-28
BC003052-1|AAH03052.1|  105|Homo sapiens ribosomal protein L36 p...   122   8e-28
AB061833-1|BAB79471.1|  105|Homo sapiens ribosomal protein L36 p...   122   8e-28
AB046410-1|BAB21256.1|   32|Homo sapiens ribosomal protein L36 p...    61   2e-09
U80761-1|AAB91452.1|  124|Homo sapiens CTG26 alternate open read...    32   1.0  
U63332-1|AAB05810.1|   46|Homo sapiens super cysteine rich prote...    32   1.4  
BC008573-1|AAH08573.1|   48|Homo sapiens HIG2 protein protein.         29   9.8  

>CR533465-1|CAG38496.1|  105|Homo sapiens RPL36 protein.
          Length = 105

 Score =  122 bits (294), Expect = 8e-28
 Identities = 64/102 (62%), Positives = 76/102 (74%)
 Frame = +3

Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
           L + +AVGL KGHK TK             + R +R +G  TKH+KFVRD++REV G A 
Sbjct: 3   LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52

Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53  YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>BC091508-1|AAH91508.1|  105|Homo sapiens ribosomal protein L36
           protein.
          Length = 105

 Score =  122 bits (294), Expect = 8e-28
 Identities = 64/102 (62%), Positives = 76/102 (74%)
 Frame = +3

Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
           L + +AVGL KGHK TK             + R +R +G  TKH+KFVRD++REV G A 
Sbjct: 3   LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52

Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53  YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>BC004971-1|AAH04971.1|  105|Homo sapiens ribosomal protein L36
           protein.
          Length = 105

 Score =  122 bits (294), Expect = 8e-28
 Identities = 64/102 (62%), Positives = 76/102 (74%)
 Frame = +3

Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
           L + +AVGL KGHK TK             + R +R +G  TKH+KFVRD++REV G A 
Sbjct: 3   LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52

Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53  YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>BC003052-1|AAH03052.1|  105|Homo sapiens ribosomal protein L36
           protein.
          Length = 105

 Score =  122 bits (294), Expect = 8e-28
 Identities = 64/102 (62%), Positives = 76/102 (74%)
 Frame = +3

Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
           L + +AVGL KGHK TK             + R +R +G  TKH+KFVRD++REV G A 
Sbjct: 3   LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52

Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53  YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>AB061833-1|BAB79471.1|  105|Homo sapiens ribosomal protein L36
           protein.
          Length = 105

 Score =  122 bits (294), Expect = 8e-28
 Identities = 64/102 (62%), Positives = 76/102 (74%)
 Frame = +3

Query: 114 LVFEIAVGLRKGHKTTKISAGRKGITDKAIRXRPARLKGLQTKHSKFVRDLLREVVGHAQ 293
           L + +AVGL KGHK TK             + R +R +G  TKH+KFVRD++REV G A 
Sbjct: 3   LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52

Query: 294 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVL
Sbjct: 53  YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94


>AB046410-1|BAB21256.1|   32|Homo sapiens ribosomal protein L36
           protein.
          Length = 32

 Score = 61.3 bits (142), Expect = 2e-09
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +3

Query: 318 LKVSKDKRALKFLKRRLGTHIRAKRKREELIN 413
           LKVSKDKRALKF+K+R+GTHIRAKRKREEL N
Sbjct: 1   LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32


>U80761-1|AAB91452.1|  124|Homo sapiens CTG26 alternate open reading
           frame protein.
          Length = 124

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 57  CCCXXXCXCXCXCCYI 10
           CCC   C C C CC++
Sbjct: 104 CCCCCCCCCCCCCCWL 119



 Score = 31.5 bits (68), Expect = 1.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 57  CCCXXXCXCXCXCCYIYXL 1
           CCC   C C C CC  + L
Sbjct: 102 CCCCCCCCCCCCCCCCWLL 120


>U63332-1|AAB05810.1|   46|Homo sapiens super cysteine rich
          protein protein.
          Length = 46

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCCY 13
          CCC   C C C CC+
Sbjct: 20 CCCCCCCCCCCCCCF 34



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 11 CCCCCCCCCCCCCC 24



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 12 CCCCCCCCCCCCCC 25



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 13 CCCCCCCCCCCCCC 26



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 14 CCCCCCCCCCCCCC 27



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 15 CCCCCCCCCCCCCC 28



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 16 CCCCCCCCCCCCCC 29



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 17 CCCCCCCCCCCCCC 30



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 18 CCCCCCCCCCCCCC 31



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 19 CCCCCCCCCCCCCC 32



 Score = 30.7 bits (66), Expect = 3.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 23 CCCCCCCCCCCFCC 36


>BC008573-1|AAH08573.1|   48|Homo sapiens HIG2 protein protein.
          Length = 48

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 300 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELIN 413
           +R+   + VS+D+ A+  L      H++ K+KR+ L N
Sbjct: 8   RRSFAFVAVSRDRTAVPSLGHSARLHLKKKKKRKSLFN 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,344,769
Number of Sequences: 237096
Number of extensions: 912892
Number of successful extensions: 2026
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1994
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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