Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0644
         (518 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B pr...   144   5e-35
BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p pro...   144   5e-35
AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p pro...   144   5e-35
AL031581-5|CAA20892.1|  115|Drosophila melanogaster EG:115C2.7,F...   144   5e-35
AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD, ...   144   5e-35
AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC, ...   144   5e-35
AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB, ...   144   5e-35
AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA, ...   144   5e-35
AY051912-1|AAK93336.1|  801|Drosophila melanogaster LD39933p pro...    31   0.71 
AE014134-2350|AAF53302.2|  800|Drosophila melanogaster CG7110-PB...    31   0.71 
BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p pro...    31   1.2  

>U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B
           protein protein.
          Length = 115

 Score =  144 bits (350), Expect = 5e-35
 Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +3

Query: 120 FEIAVGLRKGHKTTKISAGRKGITDKAIRX-RPARLKGLQTKHSKFVRDLLREVVGHAQY 296
           +E+A+GL KGHKT+KI    K   DK ++  R +RLK +QT+H+KF+RDL+REVVGHA Y
Sbjct: 5   YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63

Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L
Sbjct: 64  EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 104


>BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p
           protein.
          Length = 115

 Score =  144 bits (350), Expect = 5e-35
 Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +3

Query: 120 FEIAVGLRKGHKTTKISAGRKGITDKAIRX-RPARLKGLQTKHSKFVRDLLREVVGHAQY 296
           +E+A+GL KGHKT+KI    K   DK ++  R +RLK +QT+H+KF+RDL+REVVGHA Y
Sbjct: 5   YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63

Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L
Sbjct: 64  EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 104


>AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p
           protein.
          Length = 115

 Score =  144 bits (350), Expect = 5e-35
 Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +3

Query: 120 FEIAVGLRKGHKTTKISAGRKGITDKAIRX-RPARLKGLQTKHSKFVRDLLREVVGHAQY 296
           +E+A+GL KGHKT+KI    K   DK ++  R +RLK +QT+H+KF+RDL+REVVGHA Y
Sbjct: 5   YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63

Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L
Sbjct: 64  EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 104


>AL031581-5|CAA20892.1|  115|Drosophila melanogaster
           EG:115C2.7,FBgn0002579;RpL36 protein.
          Length = 115

 Score =  144 bits (350), Expect = 5e-35
 Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +3

Query: 120 FEIAVGLRKGHKTTKISAGRKGITDKAIRX-RPARLKGLQTKHSKFVRDLLREVVGHAQY 296
           +E+A+GL KGHKT+KI    K   DK ++  R +RLK +QT+H+KF+RDL+REVVGHA Y
Sbjct: 5   YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63

Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L
Sbjct: 64  EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 104


>AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD,
           isoform D protein.
          Length = 115

 Score =  144 bits (350), Expect = 5e-35
 Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +3

Query: 120 FEIAVGLRKGHKTTKISAGRKGITDKAIRX-RPARLKGLQTKHSKFVRDLLREVVGHAQY 296
           +E+A+GL KGHKT+KI    K   DK ++  R +RLK +QT+H+KF+RDL+REVVGHA Y
Sbjct: 5   YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63

Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L
Sbjct: 64  EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 104


>AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC,
           isoform C protein.
          Length = 115

 Score =  144 bits (350), Expect = 5e-35
 Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +3

Query: 120 FEIAVGLRKGHKTTKISAGRKGITDKAIRX-RPARLKGLQTKHSKFVRDLLREVVGHAQY 296
           +E+A+GL KGHKT+KI    K   DK ++  R +RLK +QT+H+KF+RDL+REVVGHA Y
Sbjct: 5   YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63

Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L
Sbjct: 64  EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 104


>AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB,
           isoform B protein.
          Length = 115

 Score =  144 bits (350), Expect = 5e-35
 Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +3

Query: 120 FEIAVGLRKGHKTTKISAGRKGITDKAIRX-RPARLKGLQTKHSKFVRDLLREVVGHAQY 296
           +E+A+GL KGHKT+KI    K   DK ++  R +RLK +QT+H+KF+RDL+REVVGHA Y
Sbjct: 5   YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63

Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L
Sbjct: 64  EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 104


>AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA,
           isoform A protein.
          Length = 115

 Score =  144 bits (350), Expect = 5e-35
 Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +3

Query: 120 FEIAVGLRKGHKTTKISAGRKGITDKAIRX-RPARLKGLQTKHSKFVRDLLREVVGHAQY 296
           +E+A+GL KGHKT+KI    K   DK ++  R +RLK +QT+H+KF+RDL+REVVGHA Y
Sbjct: 5   YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63

Query: 297 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELINVL 419
           EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L
Sbjct: 64  EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNIL 104


>AY051912-1|AAK93336.1|  801|Drosophila melanogaster LD39933p
           protein.
          Length = 801

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +3

Query: 186 ITDKAIRXRPARLKGLQTKHSK-FVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKR 362
           +T   I  R  R   L+T   K + RDL++++      ++R++ELL+  K++R  + L R
Sbjct: 273 VTGDGIMERNLRSAELETARKKDYQRDLMQQI----DEKRRSIELLR-EKERRQEEALTR 327

Query: 363 RLGTHIRAKRKREEL 407
           RL   ++  +  E+L
Sbjct: 328 RLEAQLKTIQLEEQL 342


>AE014134-2350|AAF53302.2|  800|Drosophila melanogaster CG7110-PB
           protein.
          Length = 800

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +3

Query: 186 ITDKAIRXRPARLKGLQTKHSK-FVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKR 362
           +T   I  R  R   L+T   K + RDL++++      ++R++ELL+  K++R  + L R
Sbjct: 273 VTGDGIMERNLRSAELETARKKDYQRDLMQQI----DEKRRSIELLR-EKERRQEEALTR 327

Query: 363 RLGTHIRAKRKREEL 407
           RL   ++  +  E+L
Sbjct: 328 RLEAQLKTIQLEEQL 342


>BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p
          protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 9  CCCCYCCCCTCCCC 22



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 57 CCCXXXCXCXCXCC 16
          CCC   C C C CC
Sbjct: 15 CCCTCCCCCCCSCC 28


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,388,956
Number of Sequences: 53049
Number of extensions: 286623
Number of successful extensions: 914
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)