BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0644 (518 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 27 0.088 AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 27 0.088 U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 22 3.3 AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 7.6 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 7.6 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 7.6 AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 7.6 AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 7.6 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 7.6 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 7.6 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 7.6 >AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin protein. Length = 339 Score = 27.5 bits (58), Expect = 0.088 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +3 Query: 228 GLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTH-IRAKR 392 GLQ K D L + YEKR+ + V + K + R+G H +R KR Sbjct: 213 GLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVESGSESFK--RARMGFHGMRGKR 266 >AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin protein. Length = 301 Score = 27.5 bits (58), Expect = 0.088 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +3 Query: 228 GLQTKHSKFVRDLLREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTH-IRAKR 392 GLQ K D L + YEKR+ + V + K + R+G H +R KR Sbjct: 213 GLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVESGSESFK--RARMGFHGMRGKR 266 >U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. Length = 53 Score = 22.2 bits (45), Expect = 3.3 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +2 Query: 137 PAKRPQNN*NIRWPQGY 187 P + P N I+WPQGY Sbjct: 38 PGQGPFNP-KIKWPQGY 53 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.0 bits (42), Expect = 7.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 354 LKRRLGTHIRAKRKREELINVL 419 LKRR G + +REE+ N+L Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.0 bits (42), Expect = 7.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 354 LKRRLGTHIRAKRKREELINVL 419 LKRR G + +REE+ N+L Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.0 bits (42), Expect = 7.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 354 LKRRLGTHIRAKRKREELINVL 419 LKRR G + +REE+ N+L Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180 >AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.0 bits (42), Expect = 7.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 354 LKRRLGTHIRAKRKREELINVL 419 LKRR G + +REE+ N+L Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180 >AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.0 bits (42), Expect = 7.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 354 LKRRLGTHIRAKRKREELINVL 419 LKRR G + +REE+ N+L Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.0 bits (42), Expect = 7.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 354 LKRRLGTHIRAKRKREELINVL 419 LKRR G + +REE+ N+L Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 21.0 bits (42), Expect = 7.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 354 LKRRLGTHIRAKRKREELINVL 419 LKRR G + +REE+ N+L Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 21.0 bits (42), Expect = 7.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 354 LKRRLGTHIRAKRKREELINVL 419 LKRR G + +REE+ N+L Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 95,166 Number of Sequences: 438 Number of extensions: 1710 Number of successful extensions: 11 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 14477538 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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