Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0642
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 58 6e-09
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 53 2e-07
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 47 2e-05
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 46 4e-05
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 45 5e-05
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 45 6e-05
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 44 8e-05
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 43 2e-04
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 43 2e-04
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 43 2e-04
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 42 3e-04
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 42 4e-04
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 41 8e-04
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 41 8e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 41 0.001
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 40 0.002
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 40 0.002
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 37 0.016
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.029
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 35 0.050
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.050
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 35 0.050
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 35 0.066
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.087
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 34 0.12
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 33 0.15
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 32 0.47
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 30 1.9
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 29 3.3
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 29 3.3
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 29 3.3
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 29 4.3
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 29 4.3
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 28 5.7
SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_37985| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_14134| Best HMM Match : Hormone_3 (HMM E-Value=2.3) 28 7.6
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 58.0 bits (134), Expect = 6e-09
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 117 KIFIGNLS-DKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVH 293
+IFIGNL+ DK DL +F ++G V+ C + N+GFV E E+ EA+ +G +++
Sbjct: 47 RIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGADEAVAKEHGRIIN 106
Query: 294 GQAIKIEAAKS 326
G+ I + S
Sbjct: 107 GKKIDVRIVNS 117
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Frame = +1
Query: 355 KIFVGNL-TDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG--ID 525
+IF+GNL TDK ++ E+F + G V+ C + N+GFV + ++A+ + +G I+
Sbjct: 47 RIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGADEAVAKEHGRIIN 106
Query: 526 GRR 534
G++
Sbjct: 107 GKK 109
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +3
Query: 96 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 275
M GT ++F+G LS +T DL +F YG ++ CD+ YGF+ E+ + EA++
Sbjct: 1 MASRGT-QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMRRE 59
Query: 276 NGELVHGQAIKIEAAKSPE 332
N + G I +E +S E
Sbjct: 60 NNRKLFGSRIVVEYVRSGE 78
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELN 516
++FVG L+ +T+ ++ +F +G ++ CD+ YGF+ + D +A++ N
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMRREN 60
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/69 (31%), Positives = 42/69 (60%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 296
++++G L TTE D+R F YG + + ++ NYGFV E+++ +A+ NG+ + G
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNGKEMLG 63
Query: 297 QAIKIEAAK 323
+ I +E ++
Sbjct: 64 ERILVEHSR 72
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG 519
++++G L T +VR F+ +G + + ++ NYGFV + D +DA+ E NG
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNG 58
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/77 (27%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 275
+F+GN+ + +E L+ +F + G V+ +V + YGF ++++ A++NL
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 276 NGELVHGQAIKIEAAKS 326
NG ++G+A+++++A S
Sbjct: 87 NGYELNGRALRVDSAAS 103
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKEL 513
+FVGN+ + +++E+F + G V+ +V + YGF A++ L
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 514 NGID 525
NG +
Sbjct: 87 NGYE 90
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +3
Query: 108 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 263
G +++ NLS T ADL+ F +YG VV IV N +G V M + +
Sbjct: 347 GGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVTMTTSEEAAKC 406
Query: 264 IQNLNGELVHGQAIKIEAAK 323
IQ+L+ +HG+AI ++ AK
Sbjct: 407 IQHLHRTELHGRAITVDRAK 426
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN---YGFVHMENEQVGREAIQNLNGEL 287
K++IG+L D ++ ++ F YG + + + RN + F ++ + +A++ L+G
Sbjct: 33 KVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGRY 92
Query: 288 VHGQAIKIEAAKSP 329
+ GQ +++E AK P
Sbjct: 93 ICGQRVRVELAKGP 106
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 299
I++ N+ +E L+ +F KYG + + +R+YGFV+ + +AI +NG + G
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVYFAKRESAVQAIDGINGAYIDGC 63
Query: 300 AIKIEAA 320
+++ A
Sbjct: 64 KLEVSLA 70
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG--IDG 528
I+V N+ +++ +F K+G + + +R+YGFV+ AI +NG IDG
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVYFAKRESAVQAIDGINGAYIDG 62
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +3
Query: 111 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN---YGFVHMENEQVGREAIQNLNG 281
T K+++GNL ++L FEK+G + + + RN + FV E+ + EA++ L+G
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELDG 62
Query: 282 ELVHGQAIKIEAAKSPEG 335
V + I++E + + G
Sbjct: 63 ANVCDRTIRVEFSNNRGG 80
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNG 519
K++VGNL + E+ F+KFG + + + RN + FV + D +A++EL+G
Sbjct: 5 KLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELDG 62
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Frame = +3
Query: 99 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVV--------ECDIVRNYGFVHMENEQVG 254
PG +FI +L + T+ADL F+ +GTV+ + ++ + +GFV +N
Sbjct: 272 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSA 331
Query: 255 REAIQNLNGELVHGQAIKIEAAKSPEGA 338
+ AIQ++NG + + +K++ K P+ A
Sbjct: 332 QNAIQHMNGFQIGAKRLKVQ-LKRPKDA 358
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKEL 513
+F+ +L + ++ + FQ FGTV+ + + +GFV D +AI+ +
Sbjct: 279 LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHM 338
Query: 514 NG 519
NG
Sbjct: 339 NG 340
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 272
+I+I ++ E D++ +FE +G VV C + + YGF+ EN+Q +AI +
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
Query: 273 LNGELVHGQAIKIEAAKSP 329
+N + GQ +++ A +P
Sbjct: 260 MNLFDLGGQFLRVGRAITP 278
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 510
+I++ ++ +++ +F+ FG VV C + + YGF+ + NDAI
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
Query: 511 LNGID 525
+N D
Sbjct: 260 MNLFD 264
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/73 (20%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 272
++++G+++ + E +R F +G + + D+ + + FV + + + A++
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 273 LNGELVHGQAIKI 311
+NG L+ G+ IK+
Sbjct: 163 MNGVLLGGRNIKV 175
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 299
+++ NLS TE L+ + +YG V +++Y FVH +AI+ +G+ + G
Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALKAIEETDGKEMDGL 390
Query: 300 AIKIEAAKSPEGAVD 344
I+ AK G D
Sbjct: 391 KIEASLAKPQPGNKD 405
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG 519
+++ NL+ +++E + ++G V +++Y FVH AI+E +G
Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALKAIEETDG 384
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Frame = +3
Query: 93 KMPGTGTFKI----FIGNLSDKTTEADLRPLFEKYGTVVE--------CDIVRNYGFVHM 236
K PGTG+ K+ FIG + E +L P+FE+ G + + + + + F
Sbjct: 141 KPPGTGSEKVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTF 200
Query: 237 ENEQVGREAIQNL-NGELVHGQAIKI 311
N+ + A++ L N E+ G+ + +
Sbjct: 201 SNKDEAQNAVKKLDNKEIRPGKRLGV 226
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 272
K +IGNL K EADL+ F +Y VV+ ++ R + FV +++ +AI
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINE 289
Query: 273 LNGELVHGQAIKIEAAKSPE 332
L+G+ G+++K+ A+S E
Sbjct: 290 LDGQEFDGRSMKVNQARSRE 309
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELN 516
KIF+G L T +++ F ++GT+V+C I+ R +GFV +++ VN+ +K+ +
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSDSVNEVLKKKD 110
Query: 517 GIDGRRTAHEGXSCRRVVSGSGRA 588
+ R S R SG+ A
Sbjct: 111 HVLDDREIEPKRSVPRDESGAPEA 134
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQ 269
KIFIG L+ TTE L+ F ++GT+V+C I+ R +GFV E+ E ++
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSDSVNEVLK 107
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = +3
Query: 108 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREA 263
G ++++G+L TEA ++ +FE +GTV ++ + YGFV + + A
Sbjct: 240 GPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 299
Query: 264 IQNLNGELVHGQAIKI 311
++ +NG + G+ +KI
Sbjct: 300 MEQMNGFELAGRPLKI 315
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKE 510
+++VG+L V+ +F+ FGTV ++ + YGFV A+++
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQ 302
Query: 511 LNGID 525
+NG +
Sbjct: 303 MNGFE 307
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG------FVHMENEQVGREAIQNLN 278
++++GNL E DL +F KYG + + D+ G FV E+ + +A++ +
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRD 321
Query: 279 GELVHGQAIKIEAAKSPEG 335
G G I++E + G
Sbjct: 322 GHEFDGYRIRVEFPRGGSG 340
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG------FVHLDATGDVNDAIKELN 516
+++VGNL R ++ ++F K+G + + D+ G FV + D DA+K +
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRD 321
Query: 517 G--IDGRR 534
G DG R
Sbjct: 322 GHEFDGYR 329
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 99 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQVGREA 263
PG T +F+GN+ TT DL+ FE+YG V++ DI + Y FV +A
Sbjct: 245 PGC-TRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELSSAIQA 303
Query: 264 IQNLNGELVHGQAIKIEAAK 323
+ ++ E V +K+ K
Sbjct: 304 RRKMDREYVGRNRVKVGFGK 323
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 462
+FVGN+ T +++E F+++G V++ DI + G
Sbjct: 251 LFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG 285
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Frame = +3
Query: 9 GNSWSLFGV-HIFNLCYILLFFVHSNP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKY 185
GN W + + C F N KM +F ++IG LS+ TE L LF K+
Sbjct: 490 GNDWLFRQLPSLQGPCIAFWVFQEVNEGFKM--AASFPVWIGGLSEDVTENVLLELFNKF 547
Query: 186 GTVVECDIVRNY-------GFVHMENEQVGREAIQNLNGELVHGQAIKIEAAK 323
G V + I+R+ GFVH + V A +NG + G+ ++ + AK
Sbjct: 548 GPVKDVVILRDESGKSRQSGFVHFWSSDVAEAANVGMNGCDILGKIVETKYAK 600
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKELN 516
+++G L++ + ELF KFG V + I+R+ GFVH ++ A +N
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGFVHFWSSDVAEAANVGMN 585
Query: 517 GID 525
G D
Sbjct: 586 GCD 588
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 388 RAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGID--GRRTAHEGXSCR 561
R +V + + +G + + + R YGFV D D DA+ +LNG D G R E R
Sbjct: 701 RESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSKGR 760
Query: 562 RVVSGSGR 585
R G GR
Sbjct: 761 R-SEGGGR 767
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 153 EADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAK 323
E+D+ YG + + + R YGFV ++ + +A+ +LNG + G+ + +E +K
Sbjct: 702 ESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSK 758
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 99 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR---NYGFVHMENEQVGREAIQ 269
P + + + NLS +T+ DL+ F KYG V D + G V E++ AI+
Sbjct: 793 PVRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIE 852
Query: 270 NLNGELVHGQAIKI 311
L+ + G+ I++
Sbjct: 853 KLDDTELGGRRIRV 866
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAIQNLNGELVH 293
I++G+L+ T+ L+ +FE++GT+ D++ R ++ ME + A+ L ++
Sbjct: 543 IWVGHLAKIVTQDTLQGIFEEHGTITSIDLIPPRGCAYIQMEKREDAYRALDKLRNIKLY 602
Query: 294 GQAIKIEAAKSPEGAVDANH 353
G ++K+ A + +G D +
Sbjct: 603 GNSVKLAWAPA-KGVKDREY 621
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 275
+F+ L+ TT+ DL +F ++GT++ C+++R+ Y F+ E ++ A +
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 276 NGELVHGQAIKIEAAKS 326
+ L+ + I ++ ++S
Sbjct: 182 DNVLIDDRRIHVDFSQS 198
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKEL 513
+FV L T ++ +F +FGT++ C+++R+ Y F+ + D A ++
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 514 NG--IDGRR 534
+ ID RR
Sbjct: 182 DNVLIDDRR 190
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 275
+++GNL T +DL +FE+YG VV+ I+R+ F+ + Q + A+ +
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 276 NGELVHGQAIKIEAAK 323
N + + G+ IK AK
Sbjct: 72 NKKQMFGRTIKCTIAK 87
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTV--VECDIVRNYGFVHMENEQVGREAIQNLNGELVH 293
IF+ L + T L LF YG + +E + + YGFV+M N + AI LNG H
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKGYGFVNMSNYEEACHAICCLNGTPQH 333
Query: 294 GQ 299
G+
Sbjct: 334 GK 335
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 275
+ I + ++ D++ +F G V C ++R+ Y FV+ +N +A++ +
Sbjct: 29 LIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREM 88
Query: 276 NGELVHGQAIKIEAAK 323
NG + + +K+ A+
Sbjct: 89 NGARLQNKTLKVSFAR 104
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 8/49 (16%)
Frame = +1
Query: 397 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNG 519
+++++F G V C ++R+ Y FV+ D D N A++E+NG
Sbjct: 42 DIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNG 90
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVG-----RE 260
+IF+ + +TTE++LR FE+YG V E IVR+ Y F+ E+++V +
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQEVADGLRDNK 68
Query: 261 AIQNLNGELVHGQAIKIEAAKS 326
+ + L GQA++ ++++S
Sbjct: 69 GLDFKDKVLSIGQAVRRKSSRS 90
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKEL 513
+IFV +T E+R F+++G V E IVR+ Y F+ ++ +V D +++
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQ-EVADGLRDN 67
Query: 514 NGIDGR-RTAHEGXSCRRVVSGS 579
G+D + + G + RR S S
Sbjct: 68 KGLDFKDKVLSIGQAVRRKSSRS 90
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +3
Query: 84 P*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENE 245
P +P +F+GNLS E L FE+ G C ++ R +G+ ++
Sbjct: 170 PKKTVPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQEGRSRGFGYADFTSK 229
Query: 246 QVGREAIQNLNGELVHGQAIKIEAAKS 326
+ +A++ LNGE G+ I+I A S
Sbjct: 230 EDYNKALE-LNGEDCCGREIRINPANS 255
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGT--VVECDIVRNYGFVHLDATGDVNDAIKELNG 519
++++G L TR +V++ F +G + E + YGFV D + D DA+ E NG
Sbjct: 4 RVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAVYECNG 60
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGT--VVECDIVRNYGFVHMENEQVGREAIQNLNGELV 290
++++G L T E D++ F YG + E + YGFV + +A+ NG+ +
Sbjct: 4 RVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAVYECNGKKM 63
Query: 291 HGQ 299
G+
Sbjct: 64 LGE 66
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 105 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLN 278
TG ++F+GNL D E +++ +F+KYG V E I + +GF+ ++ A L+
Sbjct: 50 TGRCRLFVGNLID-CDEEEMKEMFKKYGEVAEVFINKEKGFGFIRLDTRLHAEAAKAGLD 108
Query: 279 GELVHGQAIKIEAA 320
G+ +++ A
Sbjct: 109 MATRKGRTLRVRFA 122
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 477
++FVGNL D E++E+F+K+G V E I + +GF+ LD
Sbjct: 54 RLFVGNLIDCDEE-EMKEMFKKYGEVAEVFINKEKGFGFIRLD 95
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +3
Query: 111 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGREAIQ 269
T +F+GNL + DLR FEK+G V++ DI R Y FV + V +A
Sbjct: 236 TRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGNTYAFVKFADLDVAAKAKC 295
Query: 270 NLNGELVHGQAIKIEAAKSPE 332
+ G+ + IKI +S +
Sbjct: 296 AMQGQCIGRNHIKIGYGRSQQ 316
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 453
+FVGNL ++R F+KFG V++ DI R
Sbjct: 239 LFVGNLETGISCQDLRLSFEKFGVVLDVDIKR 270
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 37.1 bits (82), Expect = 0.012
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYG-TVVECDIV---------------RNYGFVHMENEQ 248
K++ GNL K T+ +L+ +FE TV + IV R +GFV N +
Sbjct: 51 KVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPE 110
Query: 249 VGREAIQNLNGELVHGQAIKIEAAKSPEGAVDANH*NIRG*FNG 380
+ A+++LNG+ V G+ +KI A S D RG + G
Sbjct: 111 DAQTAVKSLNGKEVQGRTLKI--APSISRGRDGGGGGYRGGYRG 152
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-YGFVHMENEQV 251
+ + K+F+G + E DLRP+FE YG + E I+++ Y H ++ ++
Sbjct: 167 SNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKDDRKL 216
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 218
K+F+G +S E DLR +F +GT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 456
K+FVG ++ + ++R +F FGT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNG 519
+++ G L R ++ + + +G V E + YGFV D D +D + +LNG
Sbjct: 6 RVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDADDCVYDLNG 60
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 296
+++ G L E DL YG V E + YGFV ++ + + + +LNG + G
Sbjct: 6 RVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDADDCVYDLNGRNLLG 65
Query: 297 Q 299
+
Sbjct: 66 E 66
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 275
+++ N+ + EA+ R FE YG +V C ++R+ GFV + + + AI +L
Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSL 194
Query: 276 NGELVHGQAIKIE 314
+G G + ++
Sbjct: 195 SGTFFPGSTMGLQ 207
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 275
+ + + T+ R +FE ++ C IVR+ +GFV + ++AI L
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 276 NGELVHGQAIKIEAAKSPEG 335
NG + + +K+ A P G
Sbjct: 109 NGFTIGNKVLKV-AFSRPGG 127
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Frame = +1
Query: 370 NLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNG 519
++TD+T R +F+ ++ C IVR+ +GFV + T D AI +LNG
Sbjct: 57 DMTDQT----FRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKLNG 110
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYG----TVVECDIV----RNYGFVHMENEQVGREAIQN 272
K+F+G L+ +TT LR FE YG VV CD R +G+V + +V R +++
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKD 74
Query: 273 L--NG-ELVHGQAIKIEAA 320
NG + G+ ++++ A
Sbjct: 75 KVENGAHRIDGKEVEVKRA 93
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 272
K++IGNL+ + E ++ FE++G V + DI+R+ +GFV +++ AI+
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEK 68
Query: 273 LNGELVHGQAIKIEAA 320
+N V G+ I + A
Sbjct: 69 MNQSSVGGRNITVALA 84
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 510
K+++GNL + E+ + F++FG V + DI+R+ +GFV L + + AI++
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEK 68
Query: 511 LN 516
+N
Sbjct: 69 MN 70
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 278
+F+G L+ T E L+ FE++G V I+ RNYGFV +++ +E ++
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFKDDGPSKEVLK--K 139
Query: 279 GELVHGQAIKIEAAKS 326
+++G+ + + +++
Sbjct: 140 SHVINGKTVDVGKSRN 155
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELN 516
+FVG L T +++ F++FG V I+ RNYGFV G + +K+ +
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFKDDGPSKEVLKKSH 141
Query: 517 GIDGR 531
I+G+
Sbjct: 142 VINGK 146
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 84 P*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 212
P + G +F+ NLS+ T E D+ F YG V + I+
Sbjct: 309 PNEEKQGVRERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHIL 351
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 35.1 bits (77), Expect = 0.050
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 275
I++G L +K +EA + LF + G VV + ++ YGFV E+ AI+ +
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74
Query: 276 NGELVHGQAIKIEAAKSPEGAVD 344
N V+G+ I++ A + +D
Sbjct: 75 NMIKVYGKPIRVNKASAHNKNLD 97
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKEL 513
I+VG L +K + ELF + G VV + ++ YGFV D + AIK +
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74
Query: 514 NGI 522
N I
Sbjct: 75 NMI 77
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 35.1 bits (77), Expect = 0.050
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVE 200
++FIGNL +AD+ +F KYGT++E
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILE 385
Score = 32.7 bits (71), Expect = 0.27
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVE 438
++F+GNL + +V E+F K+GT++E
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILE 385
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 209
K+F+G LS +TT+ L+ F KYG +V DI
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDI 60
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI 447
K+FVG L+ +T ++E F K+G +V DI
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDI 60
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 34.7 bits (76), Expect = 0.066
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 135 LSDKTTEADLRPLFEKYGTVVECDIVRNY 221
LS TTE DLRP+FEKYG V IV ++
Sbjct: 188 LSLYTTERDLRPVFEKYGPVEAIQIVYDH 216
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 34.3 bits (75), Expect = 0.087
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 450
K+FVGN+ K RA E+++ F FG VV I+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQII 111
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 212
K+F+GN+ K +L+ F +G VV I+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQII 111
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 34.3 bits (75), Expect = 0.087
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREAIQNLN 278
++I NL D + LR F YGT+ ++++ +GFV + + +A+ +N
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMN 273
Query: 279 GELVHGQAIKIEAAKSPE 332
G ++ + + + A+ E
Sbjct: 274 GRILISKPLYVALAQRRE 291
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 278
+++ N D + ++ + + G +V ++ + +GFV E + EA+ LN
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLN 170
Query: 279 GELVHGQAIKIEAAK 323
G+ + G+ + AK
Sbjct: 171 GKEIGGRRLWAGRAK 185
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKELN 516
+++ NL D +RE F +GT+ ++++ +GFV + + A+ E+N
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMN 273
Query: 517 G 519
G
Sbjct: 274 G 274
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELN 516
++V N D +++E+ + G +V ++ + +GFV + + +A+ LN
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLN 170
Query: 517 G--IDGRR 534
G I GRR
Sbjct: 171 GKEIGGRR 178
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVE---C-DIV--RNYGFVHMENEQVGR----EAIQ 269
+++G+L+ TEA L F G+V+ C D+V R+ G+ ++ +Q G EAI
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAIA 74
Query: 270 NLNGELVHGQAI 305
++G L++ + +
Sbjct: 75 RVDGMLLNDKKV 86
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +3
Query: 123 FIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLN 278
++G L+++ E L F +G + + I R +GFV E + AI N+N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 279 GELVHGQAIKIEAAK 323
+ G+ I++ AK
Sbjct: 68 ESELFGRTIRVNLAK 82
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Frame = +3
Query: 96 MPGTGTFKI-----FIGNLSDKTTEADLRPLFEKYGTVV--------ECDIVRNYGFVHM 236
+P TG K+ +I L TT+ DL L KYGT++ + ++ + YGFV
Sbjct: 89 LPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDF 148
Query: 237 ENEQVGREAIQNLNGELVHGQAIK 308
E+ ++A+ L + + Q K
Sbjct: 149 ESPISAQKAVAALVNKGIQAQMAK 172
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 162 LRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIE 314
L+ +F ++G +++ ++ RN+G+ +Q AIQ L+G V G +KI+
Sbjct: 354 LKDVFSRFGNLIDVWMMKERNFGYAKFAAKQSADAAIQGLHGHDVLGMKLKID 406
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAI-QNLNGELV 290
+++G L K TE DLR F ++G + +V +N FV + A ++ N ++
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFVCFTSRAAAEAAADRSFNKLIL 365
Query: 291 HGQAIKIEAAKS 326
G+ +KI KS
Sbjct: 366 KGRRLKIMWGKS 377
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNG 281
+++GNL K T+ + +F K VV C ++ + Y FV E +EA ++
Sbjct: 371 LYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQEAKFRMDQ 430
Query: 282 ELVHGQAIKIEAAKSPEG 335
V + +K+ A + G
Sbjct: 431 RTVMDKKLKVNWATNHPG 448
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVHMENEQ 248
+++GNL + +L+ +F +YG+++E + + Y F++ E+
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFINARGEK 661
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDA 501
++VGNL K + +F K VV C ++ + Y FV + D +A
Sbjct: 371 LYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQEA 424
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI---VRNYGFV 230
K+F+G L + TTE L F ++G V + I R++GFV
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHFGFV 240
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI---VRNYGFVHLDATGD-VNDAIKELN 516
K+FVG L + T + E F +FG V + I R++GFV + + V+ A + +N
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHFGFVTFASVANCVSIAFENMN 257
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVH---MENEQVGREAI 266
+F+GNL + TE L YG + +VR+ YGFV EN ++ +
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 267 QNLNGELVHGQAIKIEAAKS 326
N + + G+ +++ A+S
Sbjct: 175 LNTASKYIGGRILRVAFAES 194
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Frame = +3
Query: 114 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQ 269
F+IF G+L + T+ L F KY + ++ IVR+ YGFV ++ +A++
Sbjct: 217 FRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMR 276
Query: 270 NLN 278
+N
Sbjct: 277 EMN 279
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTV 194
K+FIG L+ TTE DL+ F YG V
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 55 IYCYSLYIVTHNLKCRAPVLSKSSSGTFLIKPQKPILDRYSKNTVRS*NAISSEITVSCT 234
IYC S + V + APVL K + T +I+P P+ ++ N AI E+ +S T
Sbjct: 186 IYCASKFAVEGYAEAMAPVLGKFNIKTTIIEP-GPVATNFASNA----KAIRDEVDISGT 240
Query: 235 WKTNKSAAK 261
+ ++ K
Sbjct: 241 DEQTQALLK 249
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 99 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 209
PG +FI +L + T+ADL F+ +GTV+ +
Sbjct: 224 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKV 260
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Frame = +3
Query: 162 LRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEA 317
L F+ +GTV+ + + +GFV +N + AIQ++NG + + +K++
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQ- 336
Query: 318 AKSPEGA 338
K P+ A
Sbjct: 337 LKRPKDA 343
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKELN 516
+FV NL + E+ ELF K G V + +V N YG+V + + A+ L+
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLD 232
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +3
Query: 213 RNYGFVHMENEQVGREAIQNLNGEL-----VHGQAIKIEAAKSPEGA 338
RN+G+V +EQ +A++ + GE + G+A+ IE A+ E +
Sbjct: 17 RNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRALNIEYAQEKESS 63
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Frame = +1
Query: 400 VRELFQKFGTVV------ECDIVRNYGFVHLDATGDVNDAIKELNG 519
+R++F KFG +V E D+ R Y F+ D A+K NG
Sbjct: 94 IRKVFSKFGQIVTEHYPMEKDLTRGYIFLEFSNASDAVRAVKTANG 139
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 212
+FI NLS +T+ ++ LF+++G + C +V
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVV 448
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 275
+FIGNL E LR LF G V ++R+ +G+V E++ A++
Sbjct: 58 VFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMN 117
Query: 276 NGELVHGQAIKIEAAKSPEGAVDANH*NIR 365
N E G+ I++ +K +H +R
Sbjct: 118 NAEF-KGRKIRVFPSKDKPQTEFISHIQVR 146
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 397 EVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKEL 513
++R L+Q + V +CDI+ + + TGD +DA+K +
Sbjct: 436 QLRALYQAYQHVAKCDILET---IDDELTGDYHDAVKAI 471
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 275
I++G++ E +++ FE++GTV + R+ Y FV ++V + A +
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTM 159
Query: 276 NGELVHGQAIK 308
+ ++ G+ +K
Sbjct: 160 HNYMMFGRLLK 170
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Frame = +3
Query: 111 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAI 266
T I + NLS++T E+DL+ LF G + + ++ + F++ + + AI
Sbjct: 180 TATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAI 239
Query: 267 QNLNGELVHGQAIKIEAAK 323
+ L+G + +E AK
Sbjct: 240 EVLSGFGYDHLILNVEWAK 258
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNL 275
++F+G + E +L P+FE G + E ++ R Y FV ++ + ++ L
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKTL 134
Query: 276 NG-ELVHGQAIKI 311
N E+ G+ I +
Sbjct: 135 NNYEIRKGKCIGV 147
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 108 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 218
G + + NL+ +TT DL+ +F+KYG + + I R+
Sbjct: 14 GMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRD 50
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Frame = +1
Query: 355 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKE 510
KIF+G L + +V+EL FG + ++V++ Y F G + AI+
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQG 733
Query: 511 LNGI 522
LNG+
Sbjct: 734 LNGM 737
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 120 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 218
+ I NL E DL+ L + YG V+ C+I R+
Sbjct: 121 LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERD 153
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Frame = +1
Query: 358 IFVGNLTDKTRAPEVRELFQKFGTV----VECD----IVRNYGFVHLDATGDVNDAIKEL 513
+FV N+ ++ + ++ ELF +G + V D ++ Y V + + A++ L
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 514 NGID 525
NG +
Sbjct: 355 NGAE 358
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 117 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 209
K+F+G L++ TTE +R F+ + E D+
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADV 39
>SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0)
Length = 556
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 576 AGHDSSTTXTLMGCPSTINTVQLFDSVVH 490
AG + + T+MGCP T + DS +H
Sbjct: 514 AGQELNKNKTVMGCPCTCGAKGMADSQIH 542
>SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 585 PAAAGHDSSTTXTLMGCPSTINTVQLFDSVVHIARRVQMHEAVVTHDIALDDRPEL 418
P GH + + LMG P + TVQ DS+ + ++T A++D P +
Sbjct: 638 PRLMGHSAVSEQLLMGQPISSPTVQWKDSLGEVFDGANFTSQLLTSVKAMNDIPSI 693
>SB_37985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -3
Query: 606 TARGRPCPAAAGHDSSTTXTLMGCPST-INTVQLFDSVVHIARRVQMHEAVVTHDIALDD 430
TA+ PA+A +S+ T + PST +++ V I R VQ+ + + +AL
Sbjct: 14 TAKSYDVPASAFSESAVIDTHLDVPSTKTESIERMVEVYEIERSVQVITSSGFNKVALQF 73
Query: 429 RPELLKQLADFGR 391
LL A R
Sbjct: 74 PDSLLADSASVAR 86
>SB_14134| Best HMM Match : Hormone_3 (HMM E-Value=2.3)
Length = 683
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Frame = +1
Query: 382 KTRAPEVRELFQKFGTVVECDIVRNYGF-VHL----DATGDVNDAIKELNGIDGRRTAHE 546
KTR +VRE G D+VR YGF H+ D G + +L G+
Sbjct: 359 KTREAKVREDSDFGGASDAIDVVRKYGFPTHVYRIADVVGRPLSEVLQLTGVIQLTEWEF 418
Query: 547 GXSCRRVVSGSG 582
+C SG G
Sbjct: 419 SEACHPYTSGRG 430
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,046,813
Number of Sequences: 59808
Number of extensions: 402428
Number of successful extensions: 1173
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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