Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0641
         (367 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   0.98 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   0.98 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   5.2  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 0.98
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 286  IYIYSINIRQRLSIFVIYFGIEIVFYFFAQI 194
            +YI  + +     +F+I+F + +V  FFA +
Sbjct: 1273 VYITYLQLEPIGFVFLIFFALLMVIQFFAMM 1303


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 0.98
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 286  IYIYSINIRQRLSIFVIYFGIEIVFYFFAQI 194
            +YI  + +     +F+I+F + +V  FFA +
Sbjct: 1273 VYITYLQLEPIGFVFLIFFALLMVIQFFAMM 1303


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 271 INIRQRLSIFVIYFGIEIVFY 209
           I I Q ++ FVI+  + IVF+
Sbjct: 37  IGIVQTVAYFVIFIILTIVFF 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,052
Number of Sequences: 336
Number of extensions: 1316
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)