Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0641
         (367 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U01134-1|AAC50060.1|  687|Homo sapiens soluble vascular endothel...    30   2.0  
BC039007-1|AAH39007.1|  687|Homo sapiens FLT1 protein protein.         30   2.0  
Z96050-1|CAI19033.1| 1406|Homo sapiens chromosome 1 open reading...    29   6.0  
Z94054-1|CAI19459.1| 1406|Homo sapiens chromosome 1 open reading...    29   6.0  
AF097535-1|AAF04619.1| 1405|Homo sapiens membrane protein CH1 pr...    29   6.0  

>U01134-1|AAC50060.1|  687|Homo sapiens soluble vascular endothelial
           cell growth factor receptor protein.
          Length = 687

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 57  ACMLDPVYTTTSYLKKKSVTVTFENCKRQI*HFEKRKRKNTR 182
           AC    VYT    L+KK +T+  E+C ++       K K+TR
Sbjct: 635 ACRARNVYTGEEILQKKEITIRGEHCNKKAVFSRISKFKSTR 676


>BC039007-1|AAH39007.1|  687|Homo sapiens FLT1 protein protein.
          Length = 687

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 57  ACMLDPVYTTTSYLKKKSVTVTFENCKRQI*HFEKRKRKNTR 182
           AC    VYT    L+KK +T+  E+C ++       K K+TR
Sbjct: 635 ACRARNVYTGEEILQKKEITIRGEHCNKKAVFSRISKFKSTR 676


>Z96050-1|CAI19033.1| 1406|Homo sapiens chromosome 1 open reading
           frame 9 protein.
          Length = 1406

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 9/26 (34%), Positives = 21/26 (80%)
 Frame = +3

Query: 171 KNTRPFNFICAKK*NTISIPKYITKI 248
           +++RPF+ +C+K+ N+ ++PK I+ +
Sbjct: 38  RHSRPFHELCSKEENSATVPKLISLV 63


>Z94054-1|CAI19459.1| 1406|Homo sapiens chromosome 1 open reading
           frame 9 protein.
          Length = 1406

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 9/26 (34%), Positives = 21/26 (80%)
 Frame = +3

Query: 171 KNTRPFNFICAKK*NTISIPKYITKI 248
           +++RPF+ +C+K+ N+ ++PK I+ +
Sbjct: 38  RHSRPFHELCSKEENSATVPKLISLV 63


>AF097535-1|AAF04619.1| 1405|Homo sapiens membrane protein CH1
           protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 9/26 (34%), Positives = 21/26 (80%)
 Frame = +3

Query: 171 KNTRPFNFICAKK*NTISIPKYITKI 248
           +++RPF+ +C+K+ N+ ++PK I+ +
Sbjct: 38  RHSRPFHELCSKEENSATVPKLISLV 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,780,763
Number of Sequences: 237096
Number of extensions: 666335
Number of successful extensions: 2172
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2172
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)