Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0640
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    26   0.28 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   3.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.0  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -2

Query: 398 LGFENQYSLVYFSLVL 351
           +GFEN Y+++YFS ++
Sbjct: 326 IGFENYYNILYFSRIM 341


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 281 GTRIFYD-RPHRTIPVPSAISRTPPKPKRNRQESIDFQILVNIF 409
           GT I+   +  RT P  S +S  PP P R +   +  Q   +I+
Sbjct: 463 GTNIYTSSKRQRTSPQLSPMSSLPPYPNRTQITEVTQQTEPSIY 506


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -3

Query: 268  VVKQVYHTHSHWDQERDLLSPESY 197
            +    Y  H HWD++   ++P  Y
Sbjct: 2508 IAVMTYDFHGHWDKQTGHVAPLYY 2531


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/52 (23%), Positives = 19/52 (36%)
 Frame = +1

Query: 499 WRGAGESWRALHDALTLCYRAWFVCGVXRPILNLTLPFYLGQMSXATPMKRE 654
           W GA   W+  ++ +      W   G     L + L FY      A P + +
Sbjct: 222 WGGADTPWQREYENVNSTVVNWVNAGADPGKLTIGLAFYGHTFQLADPAQHD 273


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +2

Query: 179 YLPYDSIRFRRK*IPFLIPVRMSVIYLFNYEKSSGTRIFYDRPHRTIPVPSAISRTPPKP 358
           YLP  S+   R  +P+  P      YLF+   +   ++F        PV     R  P P
Sbjct: 24  YLP-PSLSDTRPMLPY--PQNYINSYLFSLSLAQNNQLFTHHKAPIRPVALPPKREIPSP 80

Query: 359 KRN 367
           KR+
Sbjct: 81  KRS 83


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 299 DRPHRTIPVPSAISRTPPKPKRNRQ 373
           + P    P P+ +SR  P+P R  Q
Sbjct: 248 ENPPTPKPRPTKVSRRKPRPPRPTQ 272


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 272 KSSGTRIFYDRPHRTIPVPSAISRTPPKPKRN 367
           +SSG+   +    ++ P P+  SR  P+P  N
Sbjct: 242 QSSGSSRSHQPATKSKPRPAPASRNAPEPADN 273


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 362 RNRQESIDFQILVNIFICVYFC 427
           R+RQE  D  +++  F   Y C
Sbjct: 304 RSRQEDTDTLVVIYTFNLFYLC 325


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 362 RNRQESIDFQILVNIFICVYFC 427
           R+RQE  D  +++  F   Y C
Sbjct: 260 RSRQEDTDTLVVIYTFNLFYLC 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,141
Number of Sequences: 336
Number of extensions: 3690
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)