Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0640
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001440-1|AAN71195.1|  219|Drosophila melanogaster GH25289p pro...    70   4e-12
AE014297-2664|AAF55671.2|  219|Drosophila melanogaster CG31221-P...    70   4e-12
AE014297-2663|AAF55669.2|  219|Drosophila melanogaster CG31221-P...    70   4e-12
BT014638-1|AAT27262.1|  433|Drosophila melanogaster RH44447p pro...    30   2.9  
AE014297-1395|AAF54710.1|  425|Drosophila melanogaster CG6959-PA...    29   5.1  

>BT001440-1|AAN71195.1|  219|Drosophila melanogaster GH25289p
           protein.
          Length = 219

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +2

Query: 2   NCDLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD 103
           N DLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD
Sbjct: 186 NGDLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD 219


>AE014297-2664|AAF55671.2|  219|Drosophila melanogaster CG31221-PB,
           isoform B protein.
          Length = 219

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +2

Query: 2   NCDLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD 103
           N DLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD
Sbjct: 186 NGDLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD 219


>AE014297-2663|AAF55669.2|  219|Drosophila melanogaster CG31221-PA,
           isoform A protein.
          Length = 219

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +2

Query: 2   NCDLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD 103
           N DLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD
Sbjct: 186 NGDLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD 219


>BT014638-1|AAT27262.1|  433|Drosophila melanogaster RH44447p
           protein.
          Length = 433

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 5   CDLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD 103
           CDL  L+ L + D++L D+ F +  L N  FLD
Sbjct: 215 CDLPSLRDLHLGDNDLRDLNFVVRCLNNLRFLD 247


>AE014297-1395|AAF54710.1|  425|Drosophila melanogaster CG6959-PA,
           isoform A protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 5   CDLGMLKSLGIKDSELGDVKFFLEKLVNTGFLD 103
           CDL  L+ L + D++L D+ F +  L N  FLD
Sbjct: 207 CDLPSLRDLHLGDNDLRDLNFEVRCLNNLRFLD 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,403,518
Number of Sequences: 53049
Number of extensions: 676205
Number of successful extensions: 1762
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1762
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)