Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0638
(687 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 50 5e-08
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 44 6e-06
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 41 3e-05
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 38 2e-04
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 31 0.045
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 29 0.14
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 29 0.14
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 27 0.55
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 27 0.73
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 26 1.3
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 25 3.0
AY994093-1|AAX86006.1| 45|Anopheles gambiae metallothionein 1 ... 25 3.0
AY070234-1|AAL58538.1| 223|Anopheles gambiae glutathione S-tran... 25 3.0
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 24 3.9
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 23 6.8
AY341429-1|AAR03495.1| 193|Anopheles gambiae sulfakinin preprop... 23 9.0
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 9.0
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 50.4 bits (115), Expect = 5e-08
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = -3
Query: 241 VILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLA 62
V+ AGDLN HT W RTN G + +D L E++ T + N RPS +D+A
Sbjct: 116 VVFAGDLNAWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVA 175
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 43.6 bits (98), Expect = 6e-06
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = -3
Query: 313 SVYLPP-----DKPLLSSDIESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFID 149
SVY PP + L +E V++AGD N HT W R N+ G L ++
Sbjct: 89 SVYAPPSLSPQEYERLLEAVELEASSHSHVVIAGDFNAWHTEWGSRRNNLRGEELLQMVE 148
Query: 148 DLTFEIVGPPTPTCYPYNIALRPSTIDL 65
L I+ + + A RPS ID+
Sbjct: 149 VLGLSILNNGSAPTFIGRGAARPSVIDV 176
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 41.1 bits (92), Expect = 3e-05
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -3
Query: 241 VILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLA 62
V+LAGD N HT W RT G L ++ L E++ T + + RPS ID+A
Sbjct: 116 VLLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVA 175
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 38.3 bits (85), Expect = 2e-04
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 241 VILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLA 62
V++AGD N H W R + G L + I L ++ T + + N A S +D+A
Sbjct: 119 VVIAGDFNAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVA 178
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.7 bits (66), Expect = 0.045
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = -3
Query: 241 VILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDL 65
V++ GD N HT W R + G L I + +++ + A S ID+
Sbjct: 138 VVIDGDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDV 196
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 29.1 bits (62), Expect = 0.14
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 241 VILAGDLNCHHTRWNCHRTNVNGRRL 164
V++AGD N H W R+N G L
Sbjct: 175 VVVAGDFNAWHEEWGSRRSNERGEVL 200
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 29.1 bits (62), Expect = 0.14
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 241 VILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDL 143
V+LAGD N H W RT G L D+L
Sbjct: 117 VLLAGDFNAMHLDWGSSRTCPKGLELLQLADNL 149
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 27.1 bits (57), Expect = 0.55
Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 6/93 (6%)
Frame = -3
Query: 325 IVIASVYLPPDKPLLSSDIESLFGMGDSV------ILAGDLNCHHTRWNCHRTNVNGRRL 164
I S Y PP L + E L + D V I++GD N T W TN G +
Sbjct: 82 ITFCSCYAPPRWDLEKFE-EMLKRISDEVYDVNPIIISGDFNAWATEWGSKSTNARGNAV 140
Query: 163 DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDL 65
L +V C + R S IDL
Sbjct: 141 LEHFSRLNLVLVN--VGFCPTFVRNSRTSIIDL 171
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 26.6 bits (56), Expect = 0.73
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -1
Query: 471 WLGMTDSPPPKAGLPFT--IGGPCTLSLSILPRSH 373
+LG T PP G+ ++ + G LSLSI+PR+H
Sbjct: 286 FLGYTTPPPDSDGIKYSDSLLGQL-LSLSIMPRNH 319
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 25.8 bits (54), Expect = 1.3
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -3
Query: 241 VILAGDLNCHHTRWNCHRTNVNGRR-LDAFID-DLTFEIVGPPTPTCYPYNIALRPSTID 68
+++AGD N W RTN G L++F +T G TPT +N R S +D
Sbjct: 113 LVIAGDFNAWAVEWGSKRTNSRGDAVLESFARLGVTLGNAG-TTPT---FNRNKRTSIVD 168
Query: 67 L 65
+
Sbjct: 169 I 169
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 24.6 bits (51), Expect = 3.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 125 TDYFKGEVVYKRVETPTVNVCTMAVPPSVV 214
+DYF GE + R +TP VC M P V+
Sbjct: 298 SDYF-GE--FNRYQTPADAVCEMGEDPEVI 324
>AY994093-1|AAX86006.1| 45|Anopheles gambiae metallothionein 1
protein.
Length = 45
Score = 24.6 bits (51), Expect = 3.0
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 208 CGGNLNRLPG*QS-LPCRTVTRCHCSEGAC 294
CG + G S PC T +C C+ G C
Sbjct: 6 CGNDCKCTSGCGSGQPCATDCKCACASGGC 35
>AY070234-1|AAL58538.1| 223|Anopheles gambiae glutathione
S-transferase E3 protein.
Length = 223
Score = 24.6 bits (51), Expect = 3.0
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +2
Query: 41 QSYVPKQCQVYSARTERDVIRITCWSWGTDYFKGEVVYKRVETPTVNVCTM 193
Q+ VP++ ++ S D++ T + GTDY G + + + ++CT+
Sbjct: 124 QTEVPQE-KIDSVHKAYDLLEATLKTSGTDYLVGGTITLADISVSTSLCTL 173
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 24.2 bits (50), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 344 RDTAH*RLDM*ERGSIERDNVQGPPIVN 427
RDT + RLD+ +R + D V+G IV+
Sbjct: 97 RDTGYQRLDLVKRSQDDPDPVKGQIIVS 124
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 23.4 bits (48), Expect = 6.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 250 PCRTVTRCHCSEGACP 297
PC + R +C ACP
Sbjct: 73 PCCEILRLYCDTSACP 88
>AY341429-1|AAR03495.1| 193|Anopheles gambiae sulfakinin
preproprotein protein.
Length = 193
Score = 23.0 bits (47), Expect = 9.0
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 395 RDNVQGPPIVNGSPAFGGGESVIPNHDVIRDFRVATRGLXTG 520
R VQGP ++ +PA + P D R + G TG
Sbjct: 94 RRTVQGPQLMQRNPATADRFADDPGVDEQDQMRFSLEGFLTG 135
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.0 bits (47), Expect = 9.0
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Frame = -3
Query: 325 IVIASVYLPPDKPLLS--------SDIESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGR 170
IV SVYLPP L+ ++I S+ ++ G +N W R +G
Sbjct: 83 IVFCSVYLPPVGSDLTVEEYKRKWTEIVSMLPRNRDTVIGGYVNVWSGAWGMERRPNDGE 142
Query: 169 RL 164
R+
Sbjct: 143 RV 144
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,164
Number of Sequences: 2352
Number of extensions: 12916
Number of successful extensions: 33
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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