BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0638 (687 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 85 1e-16 M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 84 1e-16 X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 75 9e-14 AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 75 1e-13 M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 73 3e-13 AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 73 3e-13 AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 70 3e-12 AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 65 7e-11 AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 61 2e-09 AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 60 4e-09 U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 58 1e-08 AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 57 2e-08 AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 56 3e-08 AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 56 3e-08 AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 53 3e-07 AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 53 4e-07 AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 50 2e-06 AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 50 2e-06 AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 50 2e-06 U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 46 4e-05 M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 45 1e-04 >M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.melanogaster Fw repetitiveelement putative reverse transcriptase, complete cds,and putative binding protein, 3' end. ). Length = 858 Score = 84.6 bits (200), Expect = 1e-16 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 4/209 (1%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMV-RNDRLXASK 440 +A +N G +++ ++ +FL + +D+ L+ E S+ + ++ +Y N + Sbjct: 6 IATWNANGVSQRKLELAQFLHEKHIDVMLLSET-HLTSKYNFQIRDYHFYGTNHPDGKAH 64 Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESL 260 GGTAI R + + +H++A+ I L + + +A+VY PP +L + Sbjct: 65 GGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLDF 124 Query: 259 F-GMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEI--VGPPTPTCYPYNIA 89 F +G I AGD N HT W N G++L I T ++ V P +PT +P ++ Sbjct: 125 FQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLN 184 Query: 88 LRPSTIDLALLRNVTLRLRSIEAMSELES 2 P ID A+ +N++ L E + +L S Sbjct: 185 KLPDLIDFAVTKNISRSLVKAECLPDLSS 213 >M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.melanogaster LINEelement J-1, clone J-1. ). Length = 916 Score = 84.2 bits (199), Expect = 1e-16 Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 3/208 (1%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXA-SK 440 + +N G R +++ FL D+ +D+ L E + +R + Y+M S+ Sbjct: 8 IGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRI-YLPGYLMYHAHHPSGNSR 66 Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISL-TGHQPIVIASVYLPPDKPLLSSDIES 263 GG+A+ + L PL TP +S + + R+ L T + +A+VYLPP + + D +S Sbjct: 67 GGSAVIIKSRLCHSPL-TP-ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKS 124 Query: 262 LF-GMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIAL 86 +F +G+ I GD N H W R+ G+ L I ++++ PT Y YN L Sbjct: 125 MFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLL 184 Query: 85 RPSTIDLALLRNVTLRLRSIEAMSELES 2 PS +D + + ++ + EL S Sbjct: 185 TPSALDFFITCGYGMGRLDVQTLQELSS 212 >X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.melanogaster white-one mutant DNA with Doc retroposon, inserted inwhite locuspromoter region. ). Length = 888 Score = 74.9 bits (176), Expect = 9e-14 Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 4/212 (1%) Frame = -3 Query: 625 SXXLAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMV-RNDRLX 449 S ++ +N G R ++ +F+ + +D+ L+ E ++ + + Y+ N Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSET-HLTNKNNFHIPGYLFYGTNHPDG 61 Query: 448 ASKGGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269 + GGT I R + L+ ++++++ + L +A+VY PP P+ Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGST-TLAAVYCPPRFPISEDQF 120 Query: 268 ESLFG-MGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFI--DDLTFEIVGPPTPTCYPY 98 F +GD I AGD N HT W + G++L + + + V P PT +P Sbjct: 121 MEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPA 180 Query: 97 NIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 + P ID A+ ++V + + EA+++L S Sbjct: 181 DPRKIPDLIDFAITKHVPRNMVTAEALADLSS 212 >AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein. Length = 888 Score = 74.5 bits (175), Expect = 1e-13 Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 4/212 (1%) Frame = -3 Query: 625 SXXLAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMV-RNDRLX 449 S ++ +N G R ++ +F+ + +D+ L+ E ++ + + Y+ N Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSET-HLTNKNNFHIPGYLFYGTNHPDG 61 Query: 448 ASKGGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269 + GGT I R + L+ ++++++ + L +A+VY PP P+ Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGST-TLAAVYCPPRFPISEDQF 120 Query: 268 ESLFG-MGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFI--DDLTFEIVGPPTPTCYPY 98 F +GD I AGD N HT W G++L + + + V P PT +P Sbjct: 121 MEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPA 180 Query: 97 NIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 + P ID A+ ++V + + EA+++L S Sbjct: 181 DPRKIPDLIDFAITKHVPRNMVTAEALADLSS 212 >M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.melanogaster mobileelement jockey gag-specific protein gene, complete cds.). Length = 192 Score = 73.3 bits (172), Expect = 3e-13 Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 3/177 (1%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXA-SK 440 + +N G R +++ FL D+ +D+ L E + +R + Y+M S+ Sbjct: 8 IGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRI-YLPGYLMYHAHHPSGNSR 66 Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISL-TGHQPIVIASVYLPPDKPLLSSDIES 263 GG+A+ + L PL TP +S + + R+ L T + +A+VYLPP + + D +S Sbjct: 67 GGSAVIIKSRLCHSPL-TP-ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKS 124 Query: 262 LF-GMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYN 95 +F +G+ I GD N H W R+ G+ L I ++++ PT Y YN Sbjct: 125 MFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYN 181 >AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. Length = 884 Score = 73.3 bits (172), Expect = 3e-13 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 20/222 (9%) Frame = -3 Query: 607 YNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXASKGGTA 428 +N +R ++ +FL +N + I L+ E S R + Y + RNDR + GG A Sbjct: 17 WNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKESRGGGVA 75 Query: 427 IYYRRALHVVPLDTPSL-SHIEASV-CRISLTGHQPIVIASVY--------LPPD----- 293 I L + P + SH+ +V +I+ + + I S+Y +P Sbjct: 76 IAVSNTL--IHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTSKCIPSSCDLSW 133 Query: 292 -----KPLLSSDIESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIV 128 K L SD+ + + + ++ GD N H W C R N G+ L+ D F I+ Sbjct: 134 DHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSIL 193 Query: 127 GPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 P PT P+N + ST+DL L N+ +L + M EL S Sbjct: 194 YPTQPTYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSS 234 >AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein. Length = 908 Score = 69.7 bits (163), Expect = 3e-12 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 3/205 (1%) Frame = -3 Query: 607 YNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVM-VRNDRLXAS-KGG 434 +N G + ++ F+R + +D+ L+ E K + PK+ +V ND + KGG Sbjct: 9 WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAET-PKLFGFVAYTANDPSGGNAKGG 67 Query: 433 TAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESLFG 254 AI + +L PL + + ++ + I T PI +VY PP + + + + Sbjct: 68 AAILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTTDEFKDILE 126 Query: 253 -MGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPS 77 I+AGD N H W R+N G L + + + + PT YPY P Sbjct: 127 EFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGSPG 186 Query: 76 TIDLALLRNVTLRLRSIEAMSELES 2 ID AL + V +I A+ EL S Sbjct: 187 YIDFALTKGVLGIHANISAVVELSS 211 >AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein. Length = 906 Score = 65.3 bits (152), Expect = 7e-11 Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 3/205 (1%) Frame = -3 Query: 607 YNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSR--RDPKVANYVMVRNDRLXASKGG 434 +N G R+ + F + VDI LV E K + A Y R S GG Sbjct: 9 WNANGISRKAKDVELFAHNKKVDILLVTELRLKRGETVKIYGYAYYPAYRPSLNNNSVGG 68 Query: 433 TAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESLF- 257 A++ R L P HI+ S +++ TG + +++Y P + + Sbjct: 69 VAVFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTRIEERHFTDIIR 127 Query: 256 GMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPS 77 G ++ GD N H W + GR L + +I+ +PT YPY + PS Sbjct: 128 ACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPS 187 Query: 76 TIDLALLRNVTLRLRSIEAMSELES 2 ID A+ + L +I +L+S Sbjct: 188 CIDFAVYHGIPDHLATITQSWDLDS 212 >AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse transcriptase protein. Length = 832 Score = 60.9 bits (141), Expect = 2e-09 Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Frame = -3 Query: 487 VANYVMVRNDRLXASKGGTAIYYRRALHVVPLDTPSL-SHIEASV-CRISLTGHQPIVIA 314 + Y + RNDR + GG AI L + P + SH+ +V +I+ + + I Sbjct: 4 IPEYTIYRNDRKESRGGGVAIAVSNTL--IHEQIPCIKSHVIENVGIQINTDSNSSLKIY 61 Query: 313 SVY--------LPPD----------KPLLSSDIESLFGMGDSVILAGDLNCHHTRWNCHR 188 S+Y +P K L SD+ + + + ++ GD N H W C R Sbjct: 62 SIYFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTR 121 Query: 187 TNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSEL 8 N G+ L+ D F I+ P PT P+N + ST+DL L N+ +L + M EL Sbjct: 122 ANGWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQEL 180 Query: 7 ES 2 S Sbjct: 181 SS 182 >AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein protein. Length = 1092 Score = 59.7 bits (138), Expect = 4e-09 Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 12/217 (5%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXASK- 440 +A +N G + D++ F+ + I +V E + ++ Y +SK Sbjct: 24 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPASSKR 83 Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGH---QPIVIASVYLPPD---KPLLS 278 GG A +L + L+ I+++ + + + IVIASVY PP P Sbjct: 84 GGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 143 Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113 +D+ E G +IL GD N H +W C R G L DA D EIV + Sbjct: 144 TDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSA 203 Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 T +P++ PS ID ++ + + + I + + L S Sbjct: 204 THFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSS 240 >U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse transcriptase protein. Length = 1084 Score = 57.6 bits (133), Expect = 1e-08 Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 12/217 (5%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440 +A +N G + D++ F+ + I +V E + ++ Y + + + + + Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPVSSKR 71 Query: 439 GGTAIYYRRAL-HVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLS--- 278 GG A ++ H+ P++ + + + + IVIASVY PP L Sbjct: 72 GGVATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLRWLPHHF 131 Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113 +D+ E G IL GD N H +W C R G L +A D T EI+ Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCA 191 Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 T +P++ PS ID ++ + + + I + ++L S Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRFEKRISSGADLSS 228 >AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein protein. Length = 1080 Score = 57.2 bits (132), Expect = 2e-08 Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 12/217 (5%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440 +A +N G + D++ F+ + I +V E ++ Y + + + + + Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71 Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGH---QPIVIASVYLPPD---KPLLS 278 GG A ++ + L+ I+++ + + + IVIASVY PP P Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131 Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113 +D+ E G IL GD N H +W C R G L +A D EI+ Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191 Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 T +P++ PS ID ++ + + + I ++++L S Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSVADLSS 228 >AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein protein. Length = 1080 Score = 56.4 bits (130), Expect = 3e-08 Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 12/217 (5%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440 +A +N G + D++ F+ + I +V E ++ Y + + + + + Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71 Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGH---QPIVIASVYLPPD---KPLLS 278 GG A ++ + L+ I+++ + + + IVIASVY PP P Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131 Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113 +D+ E G IL GD N H +W C R G L +A D EI+ Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191 Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 T +P++ PS ID ++ + + + I + ++L S Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSS 228 >AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein protein. Length = 1080 Score = 56.4 bits (130), Expect = 3e-08 Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 12/217 (5%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440 +A +N G + D++ F+ + I +V E ++ Y + + + + + Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71 Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGH---QPIVIASVYLPPD---KPLLS 278 GG A ++ + L+ I+++ + + + IVIASVY PP P Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131 Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113 +D+ E G IL GD N H +W C R G L +A D EI+ Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191 Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 T +P++ PS ID ++ + + + I + ++L S Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSS 228 >AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. Length = 1227 Score = 53.2 bits (122), Expect = 3e-07 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 6/172 (3%) Frame = -3 Query: 607 YNXXGXXRQRDQIFEFLRDNXVDIXLVQEX---CXKPSRRDPKVANYVMVRNDRLXASKG 437 +N G +++ ++D+ DI +QE C + PK + ++K Sbjct: 8 WNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKEYSGYFHNFSYNTSAKQ 67 Query: 436 GTAIYYRRALHVVPLDTPSLSHIEASV-CR-ISLTGHQPIVIASVYLPPDKPLLSSDI-E 266 G + +R VP + +I +S+ C + L Q I I + Y+PP + SSDI E Sbjct: 68 GIGVLIKRN---VP---HTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISE 121 Query: 265 SLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPT 110 L + S IL GDLN W RTN G++++ I + + ++ +PT Sbjct: 122 ILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPT 173 >AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein protein. Length = 1042 Score = 52.8 bits (121), Expect = 4e-07 Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 8/116 (6%) Frame = -3 Query: 325 IVIASVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRR 167 IVIASVY PP P +D+ E G IL GD N H +W C R G Sbjct: 75 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 134 Query: 166 L-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 L +A D EI+ T +P++ PS ID ++ + + + I + ++L S Sbjct: 135 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSS 190 >AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein protein. Length = 1103 Score = 50.4 bits (115), Expect = 2e-06 Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 12/217 (5%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440 + +N G + +++ +++ + I LV E + + + + + + K Sbjct: 16 IGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTSHRK 75 Query: 439 GGTA-IYYRRALHVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269 GGTA I + H P++T + ++ S ++A +Y PP + Sbjct: 76 GGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQF 135 Query: 268 ESLFGMGDSV-------ILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113 LF + + IL GD NC H W + + GR L + + +IV Sbjct: 136 SKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195 Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 T +P++ +PS +D A+ + + + EL S Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSS 232 >AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein protein. Length = 1103 Score = 50.4 bits (115), Expect = 2e-06 Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 12/217 (5%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440 + +N G + +++ +++ + I LV E + + + + + + K Sbjct: 16 IGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTSHRK 75 Query: 439 GGTA-IYYRRALHVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269 GGTA I + H P++T + ++ S ++A +Y PP + Sbjct: 76 GGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQF 135 Query: 268 ESLFGMGDSV-------ILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113 LF + + IL GD NC H W + + GR L + + +IV Sbjct: 136 SKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195 Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 T +P++ +PS +D A+ + + + EL S Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSS 232 >AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein protein. Length = 1103 Score = 50.4 bits (115), Expect = 2e-06 Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 12/217 (5%) Frame = -3 Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440 + +N G + +++ +++ + I LV E + + + + + + K Sbjct: 16 IGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTSHRK 75 Query: 439 GGTA-IYYRRALHVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269 GGTA I + H P++T + ++ S ++A +Y PP + Sbjct: 76 GGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQF 135 Query: 268 ESLFGMGDSV-------ILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113 LF + + IL GD NC H W + + GR L + + +IV Sbjct: 136 SKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195 Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 T +P++ +PS +D A+ + + + EL S Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSS 232 >U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Drosophila melanogastertelomere-associated transposons TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds. ). Length = 964 Score = 46.4 bits (105), Expect = 4e-05 Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 8/112 (7%) Frame = -3 Query: 313 SVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DA 158 SVY PP P +D+ E G IL GD N H +W C R G L +A Sbjct: 1 SVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEA 60 Query: 157 FIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2 D EI+ T +P++ PS ID ++ + + + I + ++L S Sbjct: 61 VQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSS 112 >M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 protein. Length = 1219 Score = 44.8 bits (101), Expect = 1e-04 Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 1/173 (0%) Frame = -3 Query: 625 SXXLAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXA 446 S + +N G + ++ I +QE + + P NY ++ N Sbjct: 2 SLTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTPINYKLLTNIATNR 61 Query: 445 SKGGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIE 266 G + ++ H V T I+ I++ + I S Y+ P K + + + Sbjct: 62 FGGVRLLVHKSIQHTVLNIT-----IDIEAIAINIESKLKLNIFSTYISPTKNITNQTLH 116 Query: 265 SLFGMGDSV-ILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPT 110 + F + + ++ GD N H W TN G+ FID++ ++ +PT Sbjct: 117 NTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPT 169 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,706,348 Number of Sequences: 53049 Number of extensions: 626361 Number of successful extensions: 1451 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1356 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1431 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 3013199100 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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