Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0638
(687 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 85 1e-16
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 84 1e-16
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 75 9e-14
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 75 1e-13
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 73 3e-13
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 73 3e-13
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 70 3e-12
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 65 7e-11
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 61 2e-09
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 60 4e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 58 1e-08
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 57 2e-08
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 56 3e-08
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 56 3e-08
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 53 3e-07
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 53 4e-07
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 50 2e-06
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 50 2e-06
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 50 2e-06
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 46 4e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 45 1e-04
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 84.6 bits (200), Expect = 1e-16
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 4/209 (1%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMV-RNDRLXASK 440
+A +N G +++ ++ +FL + +D+ L+ E S+ + ++ +Y N +
Sbjct: 6 IATWNANGVSQRKLELAQFLHEKHIDVMLLSET-HLTSKYNFQIRDYHFYGTNHPDGKAH 64
Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESL 260
GGTAI R + + +H++A+ I L + + +A+VY PP +L +
Sbjct: 65 GGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLDF 124
Query: 259 F-GMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEI--VGPPTPTCYPYNIA 89
F +G I AGD N HT W N G++L I T ++ V P +PT +P ++
Sbjct: 125 FQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLN 184
Query: 88 LRPSTIDLALLRNVTLRLRSIEAMSELES 2
P ID A+ +N++ L E + +L S
Sbjct: 185 KLPDLIDFAVTKNISRSLVKAECLPDLSS 213
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 84.2 bits (199), Expect = 1e-16
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXA-SK 440
+ +N G R +++ FL D+ +D+ L E + +R + Y+M S+
Sbjct: 8 IGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRI-YLPGYLMYHAHHPSGNSR 66
Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISL-TGHQPIVIASVYLPPDKPLLSSDIES 263
GG+A+ + L PL TP +S + + R+ L T + +A+VYLPP + + D +S
Sbjct: 67 GGSAVIIKSRLCHSPL-TP-ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKS 124
Query: 262 LF-GMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIAL 86
+F +G+ I GD N H W R+ G+ L I ++++ PT Y YN L
Sbjct: 125 MFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLL 184
Query: 85 RPSTIDLALLRNVTLRLRSIEAMSELES 2
PS +D + + ++ + EL S
Sbjct: 185 TPSALDFFITCGYGMGRLDVQTLQELSS 212
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 74.9 bits (176), Expect = 9e-14
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Frame = -3
Query: 625 SXXLAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMV-RNDRLX 449
S ++ +N G R ++ +F+ + +D+ L+ E ++ + + Y+ N
Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSET-HLTNKNNFHIPGYLFYGTNHPDG 61
Query: 448 ASKGGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269
+ GGT I R + L+ ++++++ + L +A+VY PP P+
Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGST-TLAAVYCPPRFPISEDQF 120
Query: 268 ESLFG-MGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFI--DDLTFEIVGPPTPTCYPY 98
F +GD I AGD N HT W + G++L + + + V P PT +P
Sbjct: 121 MEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPA 180
Query: 97 NIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
+ P ID A+ ++V + + EA+++L S
Sbjct: 181 DPRKIPDLIDFAITKHVPRNMVTAEALADLSS 212
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 74.5 bits (175), Expect = 1e-13
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Frame = -3
Query: 625 SXXLAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMV-RNDRLX 449
S ++ +N G R ++ +F+ + +D+ L+ E ++ + + Y+ N
Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSET-HLTNKNNFHIPGYLFYGTNHPDG 61
Query: 448 ASKGGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269
+ GGT I R + L+ ++++++ + L +A+VY PP P+
Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGST-TLAAVYCPPRFPISEDQF 120
Query: 268 ESLFG-MGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFI--DDLTFEIVGPPTPTCYPY 98
F +GD I AGD N HT W G++L + + + V P PT +P
Sbjct: 121 MEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPA 180
Query: 97 NIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
+ P ID A+ ++V + + EA+++L S
Sbjct: 181 DPRKIPDLIDFAITKHVPRNMVTAEALADLSS 212
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 73.3 bits (172), Expect = 3e-13
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 3/177 (1%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXA-SK 440
+ +N G R +++ FL D+ +D+ L E + +R + Y+M S+
Sbjct: 8 IGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRI-YLPGYLMYHAHHPSGNSR 66
Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISL-TGHQPIVIASVYLPPDKPLLSSDIES 263
GG+A+ + L PL TP +S + + R+ L T + +A+VYLPP + + D +S
Sbjct: 67 GGSAVIIKSRLCHSPL-TP-ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKS 124
Query: 262 LF-GMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYN 95
+F +G+ I GD N H W R+ G+ L I ++++ PT Y YN
Sbjct: 125 MFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYN 181
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 73.3 bits (172), Expect = 3e-13
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Frame = -3
Query: 607 YNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXASKGGTA 428
+N +R ++ +FL +N + I L+ E S R + Y + RNDR + GG A
Sbjct: 17 WNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKESRGGGVA 75
Query: 427 IYYRRALHVVPLDTPSL-SHIEASV-CRISLTGHQPIVIASVY--------LPPD----- 293
I L + P + SH+ +V +I+ + + I S+Y +P
Sbjct: 76 IAVSNTL--IHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTSKCIPSSCDLSW 133
Query: 292 -----KPLLSSDIESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIV 128
K L SD+ + + + ++ GD N H W C R N G+ L+ D F I+
Sbjct: 134 DHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSIL 193
Query: 127 GPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
P PT P+N + ST+DL L N+ +L + M EL S
Sbjct: 194 YPTQPTYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSS 234
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 69.7 bits (163), Expect = 3e-12
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 3/205 (1%)
Frame = -3
Query: 607 YNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVM-VRNDRLXAS-KGG 434
+N G + ++ F+R + +D+ L+ E K + PK+ +V ND + KGG
Sbjct: 9 WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAET-PKLFGFVAYTANDPSGGNAKGG 67
Query: 433 TAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESLFG 254
AI + +L PL + + ++ + I T PI +VY PP + + + +
Sbjct: 68 AAILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTTDEFKDILE 126
Query: 253 -MGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPS 77
I+AGD N H W R+N G L + + + + PT YPY P
Sbjct: 127 EFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGSPG 186
Query: 76 TIDLALLRNVTLRLRSIEAMSELES 2
ID AL + V +I A+ EL S
Sbjct: 187 YIDFALTKGVLGIHANISAVVELSS 211
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 65.3 bits (152), Expect = 7e-11
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 3/205 (1%)
Frame = -3
Query: 607 YNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSR--RDPKVANYVMVRNDRLXASKGG 434
+N G R+ + F + VDI LV E K + A Y R S GG
Sbjct: 9 WNANGISRKAKDVELFAHNKKVDILLVTELRLKRGETVKIYGYAYYPAYRPSLNNNSVGG 68
Query: 433 TAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIESLF- 257
A++ R L P HI+ S +++ TG + +++Y P + +
Sbjct: 69 VAVFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTRIEERHFTDIIR 127
Query: 256 GMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPS 77
G ++ GD N H W + GR L + +I+ +PT YPY + PS
Sbjct: 128 ACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPS 187
Query: 76 TIDLALLRNVTLRLRSIEAMSELES 2
ID A+ + L +I +L+S
Sbjct: 188 CIDFAVYHGIPDHLATITQSWDLDS 212
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 60.9 bits (141), Expect = 2e-09
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Frame = -3
Query: 487 VANYVMVRNDRLXASKGGTAIYYRRALHVVPLDTPSL-SHIEASV-CRISLTGHQPIVIA 314
+ Y + RNDR + GG AI L + P + SH+ +V +I+ + + I
Sbjct: 4 IPEYTIYRNDRKESRGGGVAIAVSNTL--IHEQIPCIKSHVIENVGIQINTDSNSSLKIY 61
Query: 313 SVY--------LPPD----------KPLLSSDIESLFGMGDSVILAGDLNCHHTRWNCHR 188
S+Y +P K L SD+ + + + ++ GD N H W C R
Sbjct: 62 SIYFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTR 121
Query: 187 TNVNGRRLDAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSEL 8
N G+ L+ D F I+ P PT P+N + ST+DL L N+ +L + M EL
Sbjct: 122 ANGWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQEL 180
Query: 7 ES 2
S
Sbjct: 181 SS 182
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 59.7 bits (138), Expect = 4e-09
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXASK- 440
+A +N G + D++ F+ + I +V E + ++ Y +SK
Sbjct: 24 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPASSKR 83
Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGH---QPIVIASVYLPPD---KPLLS 278
GG A +L + L+ I+++ + + + IVIASVY PP P
Sbjct: 84 GGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 143
Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113
+D+ E G +IL GD N H +W C R G L DA D EIV +
Sbjct: 144 TDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSA 203
Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
T +P++ PS ID ++ + + + I + + L S
Sbjct: 204 THFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSS 240
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 57.6 bits (133), Expect = 1e-08
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440
+A +N G + D++ F+ + I +V E + ++ Y + + + + +
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPVSSKR 71
Query: 439 GGTAIYYRRAL-HVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLS--- 278
GG A ++ H+ P++ + + + + IVIASVY PP L
Sbjct: 72 GGVATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLRWLPHHF 131
Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113
+D+ E G IL GD N H +W C R G L +A D T EI+
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCA 191
Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
T +P++ PS ID ++ + + + I + ++L S
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRFEKRISSGADLSS 228
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 57.2 bits (132), Expect = 2e-08
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440
+A +N G + D++ F+ + I +V E ++ Y + + + + +
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGH---QPIVIASVYLPPD---KPLLS 278
GG A ++ + L+ I+++ + + + IVIASVY PP P
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113
+D+ E G IL GD N H +W C R G L +A D EI+
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191
Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
T +P++ PS ID ++ + + + I ++++L S
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSVADLSS 228
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 56.4 bits (130), Expect = 3e-08
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440
+A +N G + D++ F+ + I +V E ++ Y + + + + +
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGH---QPIVIASVYLPPD---KPLLS 278
GG A ++ + L+ I+++ + + + IVIASVY PP P
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113
+D+ E G IL GD N H +W C R G L +A D EI+
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191
Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
T +P++ PS ID ++ + + + I + ++L S
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSS 228
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 56.4 bits (130), Expect = 3e-08
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440
+A +N G + D++ F+ + I +V E ++ Y + + + + +
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 439 GGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGH---QPIVIASVYLPPD---KPLLS 278
GG A ++ + L+ I+++ + + + IVIASVY PP P
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 277 SDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113
+D+ E G IL GD N H +W C R G L +A D EI+
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191
Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
T +P++ PS ID ++ + + + I + ++L S
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSS 228
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 53.2 bits (122), Expect = 3e-07
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Frame = -3
Query: 607 YNXXGXXRQRDQIFEFLRDNXVDIXLVQEX---CXKPSRRDPKVANYVMVRNDRLXASKG 437
+N G +++ ++D+ DI +QE C + PK + ++K
Sbjct: 8 WNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKEYSGYFHNFSYNTSAKQ 67
Query: 436 GTAIYYRRALHVVPLDTPSLSHIEASV-CR-ISLTGHQPIVIASVYLPPDKPLLSSDI-E 266
G + +R VP + +I +S+ C + L Q I I + Y+PP + SSDI E
Sbjct: 68 GIGVLIKRN---VP---HTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISE 121
Query: 265 SLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPT 110
L + S IL GDLN W RTN G++++ I + + ++ +PT
Sbjct: 122 ILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPT 173
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 52.8 bits (121), Expect = 4e-07
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Frame = -3
Query: 325 IVIASVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRR 167
IVIASVY PP P +D+ E G IL GD N H +W C R G
Sbjct: 75 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 134
Query: 166 L-DAFIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
L +A D EI+ T +P++ PS ID ++ + + + I + ++L S
Sbjct: 135 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSS 190
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 50.4 bits (115), Expect = 2e-06
Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 12/217 (5%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440
+ +N G + +++ +++ + I LV E + + + + + + K
Sbjct: 16 IGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTSHRK 75
Query: 439 GGTA-IYYRRALHVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269
GGTA I + H P++T + ++ S ++A +Y PP +
Sbjct: 76 GGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQF 135
Query: 268 ESLFGMGDSV-------ILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113
LF + + IL GD NC H W + + GR L + + +IV
Sbjct: 136 SKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
T +P++ +PS +D A+ + + + EL S
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSS 232
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 50.4 bits (115), Expect = 2e-06
Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 12/217 (5%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440
+ +N G + +++ +++ + I LV E + + + + + + K
Sbjct: 16 IGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTSHRK 75
Query: 439 GGTA-IYYRRALHVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269
GGTA I + H P++T + ++ S ++A +Y PP +
Sbjct: 76 GGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQF 135
Query: 268 ESLFGMGDSV-------ILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113
LF + + IL GD NC H W + + GR L + + +IV
Sbjct: 136 SKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
T +P++ +PS +D A+ + + + EL S
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSS 232
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 50.4 bits (115), Expect = 2e-06
Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 12/217 (5%)
Frame = -3
Query: 616 LAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANY-VMVRNDRLXASK 440
+ +N G + +++ +++ + I LV E + + + + + + K
Sbjct: 16 IGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTSHRK 75
Query: 439 GGTA-IYYRRALHVV--PLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDI 269
GGTA I + H P++T + ++ S ++A +Y PP +
Sbjct: 76 GGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQF 135
Query: 268 ESLFGMGDSV-------ILAGDLNCHHTRWNCHRTNVNGRRL-DAFIDDLTFEIVGPPTP 113
LF + + IL GD NC H W + + GR L + + +IV
Sbjct: 136 SKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 112 TCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
T +P++ +PS +D A+ + + + EL S
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSS 232
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 46.4 bits (105), Expect = 4e-05
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Frame = -3
Query: 313 SVYLPPD---KPLLSSDI----ESLFGMGDSVILAGDLNCHHTRWNCHRTNVNGRRL-DA 158
SVY PP P +D+ E G IL GD N H +W C R G L +A
Sbjct: 1 SVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEA 60
Query: 157 FIDDLTFEIVGPPTPTCYPYNIALRPSTIDLALLRNVTLRLRSIEAMSELES 2
D EI+ T +P++ PS ID ++ + + + I + ++L S
Sbjct: 61 VQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSS 112
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 44.8 bits (101), Expect = 1e-04
Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 1/173 (0%)
Frame = -3
Query: 625 SXXLAXYNXXGXXRQRDQIFEFLRDNXVDIXLVQEXCXKPSRRDPKVANYVMVRNDRLXA 446
S + +N G + ++ I +QE + + P NY ++ N
Sbjct: 2 SLTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTPINYKLLTNIATNR 61
Query: 445 SKGGTAIYYRRALHVVPLDTPSLSHIEASVCRISLTGHQPIVIASVYLPPDKPLLSSDIE 266
G + ++ H V T I+ I++ + I S Y+ P K + + +
Sbjct: 62 FGGVRLLVHKSIQHTVLNIT-----IDIEAIAINIESKLKLNIFSTYISPTKNITNQTLH 116
Query: 265 SLFGMGDSV-ILAGDLNCHHTRWNCHRTNVNGRRLDAFIDDLTFEIVGPPTPT 110
+ F + + ++ GD N H W TN G+ FID++ ++ +PT
Sbjct: 117 NTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPT 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,706,348
Number of Sequences: 53049
Number of extensions: 626361
Number of successful extensions: 1451
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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