BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0638 (687 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.7 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.8 AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 6.3 >DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel protein. Length = 489 Score = 23.0 bits (47), Expect = 2.7 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 100 YNIALRPSTIDLALLRNVTLRLRSIEAMSEL 8 Y+I LRP+ LL + L + S +A+SE+ Sbjct: 48 YDIRLRPNFGGEPLLVGMDLTIASFDAISEV 78 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 22.2 bits (45), Expect = 4.8 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = -3 Query: 364 ASVCRISLTGHQPIVIASVYLPP-DKPLL 281 ASV +LTG P ++ LPP + PL+ Sbjct: 469 ASVVAAALTGTYPTLLPQWCLPPREAPLV 497 >AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase beta-3 protein. Length = 832 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%) Frame = +2 Query: 32 TQAQS-YVPKQCQVYSARTERDVIR 103 T A+S ++P++ ++YS T +DV R Sbjct: 661 TPAESTFIPEERRIYSPITFQDVAR 685 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 171,324 Number of Sequences: 438 Number of extensions: 3564 Number of successful extensions: 4 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20952180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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