BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0637 (700 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0144 + 26258841-26258948,26259099-26259212,26259335-262595... 77 1e-14 04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 75 4e-14 03_06_0282 - 32824950-32825135,32825247-32825505,32825651-328259... 75 7e-14 01_05_0337 + 21115388-21115961,21116471-21116597,21116683-211168... 52 4e-07 10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454 30 1.5 07_03_0507 - 18871260-18871361,18871444-18871560,18871792-188721... 28 8.2 03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,688... 28 8.2 02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,369... 28 8.2 >02_05_0144 + 26258841-26258948,26259099-26259212,26259335-26259556, 26259660-26259734,26259827-26259943,26260046-26260296, 26260833-26260908,26261045-26261131,26261216-26261401 Length = 411 Score = 77.0 bits (181), Expect = 1e-14 Identities = 36/83 (43%), Positives = 49/83 (59%) Frame = +3 Query: 441 LEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACV 620 ++++ + +D G +G+R QH R P KGGIR+ +V DEV AL+ LMT+K A Sbjct: 35 IKVECTIPKDDGTLATFVGFRVQHDNSRGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94 Query: 621 DVPFGGAXAGIKINPKEYSEHEL 689 VP+GGA GI P E S EL Sbjct: 95 AVPYGGAKGGIGCTPGELSRSEL 117 >04_04_0678 + 27207340-27207447,27207555-27207668,27209111-27209332, 27209407-27209481,27209569-27209685,27210145-27210395, 27210686-27210761,27210862-27210948,27211037-27211222 Length = 411 Score = 75.4 bits (177), Expect = 4e-14 Identities = 35/83 (42%), Positives = 49/83 (59%) Frame = +3 Query: 441 LEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACV 620 ++++ + +D G +G+R QH R P KGGIR+ +V DEV AL+ LMT+K A Sbjct: 35 IKVECTIPKDDGTLASFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94 Query: 621 DVPFGGAXAGIKINPKEYSEHEL 689 +P+GGA GI P E S EL Sbjct: 95 AIPYGGAKGGIGCAPGELSTSEL 117 >03_06_0282 - 32824950-32825135,32825247-32825505,32825651-32825901, 32826309-32826425,32826613-32826687,32826788-32827009, 32827396-32827509,32827694-32827801 Length = 443 Score = 74.5 bits (175), Expect = 7e-14 Identities = 34/83 (40%), Positives = 51/83 (61%) Frame = +3 Query: 441 LEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACV 620 ++++ + +D G +G+R QH R P KGGIR+ +V DEV AL+ LMT+K A Sbjct: 35 IKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVA 94 Query: 621 DVPFGGAXAGIKINPKEYSEHEL 689 ++P+GGA GI +P + S EL Sbjct: 95 NIPYGGAKGGIGCSPGDLSISEL 117 >01_05_0337 + 21115388-21115961,21116471-21116597,21116683-21116884, 21117460-21117546,21117622-21117681,21117800-21117886, 21118451-21118522,21118675-21118730,21118812-21118897, 21119427-21119517,21119593-21119750,21119827-21119918, 21120110-21120190,21120282-21120479 Length = 656 Score = 52.0 bits (119), Expect = 4e-07 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 1/113 (0%) Frame = +3 Query: 354 EDLKSRTPIEEKKKKVAGIL-KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRTP 530 E + S P+ K + IL +L+EP + + P D G+ + G+R Q S P Sbjct: 220 EVVHSLEPVLVKNSQHVQILERLLEP-ERCFIFRVPWVDDRGEAHVNRGFRVQFSQALGP 278 Query: 531 TKGGIRFSTDVTRDEVKALSALMTFKCACVDVPFGGAXAGIKINPKEYSEHEL 689 +GG+RF +T K L+ T K A GGA G +PK SE E+ Sbjct: 279 CRGGLRFHPSMTLSVAKFLAFEQTLKNALSQYKLGGAAGGSDFDPKGKSESEI 331 >10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454 Length = 748 Score = 30.3 bits (65), Expect = 1.5 Identities = 20/88 (22%), Positives = 37/88 (42%) Frame = +3 Query: 297 HMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSG 476 H F + V ED + + + +E K+KV + E + ++ ++ + G Sbjct: 642 HSGRAMFDKEIAVEEDIFILEEIGKLAMECLKEKVEERPDMKEVAERLVMLRRARKHGQG 701 Query: 477 DYEMILGYRAQHSTHRTPTKGGIRFSTD 560 Y + + + S TPT G FST+ Sbjct: 702 SYNLSPRHHEEISIETTPTSFGADFSTN 729 >07_03_0507 - 18871260-18871361,18871444-18871560,18871792-18872120, 18872704-18872871,18873592-18873685,18873707-18873766, 18874702-18874762,18875258-18875319,18875729-18875856, 18876783-18876852,18877472-18877630 Length = 449 Score = 27.9 bits (59), Expect = 8.2 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -2 Query: 576 LHLWLRPLR-IEYLLWLESCVWNVVRDS 496 LH +LRPL + Y W+ V NV+RD+ Sbjct: 281 LHNFLRPLLFLMYSFWVPQIVTNVIRDT 308 >03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785, 68871-69005,69131-69310,69495-69701,69821-69943, 70240-70359,70758-70880,72067-72171,72254-72398, 73443-73607,73669-73907,74452-74484,74977-75058, 75200-75360,75739-75951,76789-76971,77051-77220, 77375-77474 Length = 1021 Score = 27.9 bits (59), Expect = 8.2 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -2 Query: 576 LHLWLRPLRIEYLLWLESCVWNVVRDSLISFRNRQNRASE 457 ++L L P++ L WN+V D+ ++F NR++ E Sbjct: 905 VYLLLDPMKFAVRYGLSGKAWNLVIDNKVAFTNRKDFGRE 944 >02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943, 3697214-3698062,3698193-3698337,3698426-3698677, 3698780-3699089,3699415-3699524 Length = 962 Score = 27.9 bits (59), Expect = 8.2 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +3 Query: 297 HMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDS 473 H F AC ++ KLV+ L +EE+ +L L+ LE +PL++D+ Sbjct: 882 HGCNTFQPLACSILATKLVDSLSYDRVLEERVLASLSLLNLVRH-PECLEKLYPLKKDT 939 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,654,723 Number of Sequences: 37544 Number of extensions: 384046 Number of successful extensions: 912 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 895 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 912 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1792053856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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