Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0635
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.069
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.65 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.65 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -1

Query: 396 YLTYLVYLICMYVFHYM*S*YCSSIIFY 313
           +  +L+ L+C+Y F+YM   +C + I +
Sbjct: 248 FTVHLLLLVCIYYFYYMHLLFCCAFIIF 275



 Score = 25.0 bits (52), Expect = 0.65
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 396 YLTYLVYLICMYVFHYM*S*YCSSIIFYCFLKQC 295
           +  +L++L+C+Y F      YC+ II  C    C
Sbjct: 275 FTMHLLFLLCIYYF------YCALIILLCIYYFC 302



 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 396 YLTYLVYLICMYVFHYM*S*YCSSIIFYCFL 304
           +  +L++L C+Y F+     +   ++FYC L
Sbjct: 202 FTLHLLFLPCIYYFYSAFIIFTIHLLFYCVL 232



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 396 YLTYLVYLICMYVFHYM*S*YCSSIIFYCFLKQC 295
           +  +L++L+C+Y F      +C+ IIF   L  C
Sbjct: 156 FTVHLLFLLCIYHF------FCAFIIFTMHLLFC 183



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 384 LVYLICMYVFHY 349
           L+ L+C+Y F+Y
Sbjct: 232 LIILLCIYYFYY 243


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 264  KNEI*IYLKFVQKIPINFLKFIIVKL 187
            KNEI +Y+ ++Q  PI F+  I   L
Sbjct: 1268 KNEIGVYITYLQLEPIGFVFLIFFAL 1293


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 264  KNEI*IYLKFVQKIPINFLKFIIVKL 187
            KNEI +Y+ ++Q  PI F+  I   L
Sbjct: 1268 KNEIGVYITYLQLEPIGFVFLIFFAL 1293


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 418  DECDFNVIFDIPSLSNMYVCVPLYVV 341
            D+CD    +   S S+ YVCV  ++V
Sbjct: 1205 DKCDSGQYYPHESCSSFYVCVNGHLV 1230


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 227 FWTNFRYIYISFFCIVCYLVIVE 295
           FW+ F  + + + C  CY  + E
Sbjct: 274 FWSAFFIVNVLYICNQCYNTVEE 296


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 69  VRCMQLKLWFKATGFFKLFIG**NTTHTLIY 161
           VRC    L F    + +L IG  N+T  LI+
Sbjct: 79  VRCQDQILIFLVNWYPRLIIGIMNSTLNLIF 109


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 218 IGIFWTNFRYIYISFFCIVCYLVIVEHCF 304
           +G+F+  F  +Y+S+  I  ++  +  CF
Sbjct: 166 LGVFFKRFLPVYVSYLLI--FVQQIPFCF 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,321
Number of Sequences: 336
Number of extensions: 3221
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)