Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0635
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74033-5|CAF31473.1|  333|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z81133-3|CAB03443.3|  527|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z74033-5|CAF31473.1|  333|Caenorhabditis elegans Hypothetical
           protein F38B7.7 protein.
          Length = 333

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -3

Query: 496 VI*IFAL-CSKHLVYSSVMFNYE*DKLDECDFNVIFDIPSLSNMYVCVPLYV 344
           VI IF + C+  +VY  + FN   +K +   FN+I    SLSN+Y+    ++
Sbjct: 26  VIGIFGIVCNSSIVY--IFFN---EKSERTSFNLICVYRSLSNIYILATTFI 72


>Z81133-3|CAB03443.3|  527|Caenorhabditis elegans Hypothetical
           protein T28B8.5 protein.
          Length = 527

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 218 IGIFWTNFRYIYISFFC 268
           +G+FWT  +Y++  F C
Sbjct: 1   MGVFWTGLKYVFTDFSC 17


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,489,072
Number of Sequences: 27780
Number of extensions: 250301
Number of successful extensions: 420
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)